Oryzias melastigma (Indian medaka): 112156614
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Entry
112156614 CDS
T07439
Name
(RefSeq) methyl-CpG-binding domain protein 5
KO
K23219
methyl-CpG-binding domain protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112156614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112156614
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
112156614
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
112156614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
112156614
NCBI-ProteinID:
XP_024144622
LinkDB
All DBs
Position
LG2:complement(17860607..17895084)
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AA seq
1420 aa
AA seq
DB search
MNGGKDCEAGADRPAGPVQVPIGWQRRAEHGGGGVVYVSPSGSVLSSLEQVKTYLLTDGT
CKCGLECPLILHKVFNFDPGASVKQRTADDVKADEDVTKLCIHKRKLLAVATLHKSMETH
PPPTLNNATAGPSSVHSTTQRAIRAKPHEGPPNAGNPDCKNAYKMMMAAGQQQRLYSPQD
VGGAQQPDLYAGYSRAPRLGSGEPGPKSPYRGGYGGMLSPPPSGAKLYGEGSQSPGADTL
GSPEGFSRTNPCGFPAAGSPGSASVHGNPRTPLSPPGMMLHGSPAGQPSCAMTGRTSTPL
SPTATAKSPVMNMNMNMPRGNFPPGVEMPRVAFHHKAQPPLHPAPPPPSIPPPCTLQKRP
VSSEKDPLGILDPIPSKPPMSTPNPTNFQPNLHSQVPMMNVNIPPPAIVPLPSNLPLPTV
KPGPVGHGGHVQRTQQSGPPPSMSPSPVTSPVHMAGPALGRLEASPHRSRSSSTSSDHGN
FAMPSGHQAPCGAMKVPPRSPRPAMGSPRPSMPSSPSTNKTDPLHQYKESQMIPGMGSSA
GAHQHTSPMYSPTPSTPMMSSSLAPPSASQKGHPGLLGMPLNHILNQQNAASFPASSLLS
AAAKAQLANQNKLGSSGNSPAGMPGGGNGGGGGGHPGSMSGPRSMEGHSTLNAMLPPNAG
MLLNTPEAPSGRAALRDKLMAQQRDPARKRKQSSGGAATHDGPNNMVYNVISKPGMGGNL
MPGPSAAEQLRKVGRMGNLPPNTSMAQLLQSMSSQSSHNLSGNSHRPGLSPGLGAGTPGG
AQIHYSENAGMVPTGGPPQNLMVQQRHRGPADAIQHCQSMDVPGGHLVSRPGQFPDMMAK
MQASSMSNCGQMGQGGPPVGRNNPPPLSHPGPHPSQLHGMGRTNMVAPHGGGDVNCNQSV
SETANPSSLSCGMGALQPHVNAVGAQVYQQQVHQSMQQGMSSHPAYQGQQHFSNNMPYPD
GNAGSMACLYQNYQQGAMSHPQFGEEQQPQAEGHPVGAPGSDRGPGGGPEVVDAIYRAVV
DAASKGMHVTITTTVSGTTQASPVPALSAMSAFTASIGEPVNLPQAVNAVLHGRQEGEAL
QQARARHARSGRAQKSMDPGKRTPEVPEAGDYFRSPGRGTPRGQWDGEVQHGGGFDSQTN
NSGWTGEEIVECSTQVRSSPCMERPASLAPAPPCPGDGSGDHTLAMVHDKAFLEDGYRYN
NCNRTPANYKEHLEQTVERCAHINGAAQHFNTRGYGDVLGPSRQELTGDDQSPSSSTSLE
GPLATAKDYGHYNGHFNGMAPSPSDTKSLSSEEDLRQPDSPSSELLHYRSRTFNMGELVW
GQLKGFPPWPAKLAGDEQVHGAAMQLREQAKVEPEKLKTLTHDLEALDRAAKRGLKPGKL
NHLHAVFHEAISELDKMSGTISSRDCQVKLPKPKRRKISR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggaaaggactgcgaggcgggagccgaccggccggccggccccgtccaggtc
cccatcggctggcagcgcagggcggagcacggcggcggcggcgtcgtgtatgtgagcccc
agtggttcggtcctgtccagcctggagcaggtgaagacctacctgctgacggatggaacc
tgcaaatgtggcctggagtgcccgcttatcctccacaaggtgttcaactttgacccgggg
gcgtctgtcaagcagcggacggcggacgacgtgaaagcggacgaagacgtgaccaagctc
tgcattcacaagaggaagctgctggccgtggccacgctgcacaagagcatggagacgcac
ccgcctccgacgctcaacaacgcaacggcaggtccgtcgtctgttcattccacaactcag
cgagcaataagagctaaaccccacgagggtccgcccaacgccggcaaccctgactgcaag
aacgcctacaaaatgatgatggcggcgggacagcagcagaggttgtattcgccgcaggat
gtgggcggagcccagcagccggacctctacgctggatactccagggctcctagactcggg
agtggagagcctggccccaaatccccataccggggtggctacggaggcatgctaagcccg
cccccctccggtgctaagctgtacggggagggctctcagtcgcccggggcggacactctg
ggcagtcctgagggcttctcaaggaccaatccttgtgggtttcctgcggcgggcagcccc
ggctccgcctccgtgcacgggaacccgaggacgccactttccccgcccggcatgatgctg
cacggctcccccgcgggccagccctcctgcgccatgacggggaggactagcacacccctc
tcccccacggccactgccaaaagccccgtcatgaacatgaacatgaacatgccccgcggg
aacttccccccaggagtcgaaatgccccgcgtggcgtttcaccacaaggcccagccccct
ttgcaccccgccccacccccgccatccatacctccgccctgcacccttcagaaaagacca
gtatcgtccgaaaaggacccgctaggcatcctcgaccccatccccagtaagccccccatg
agcacccccaaccccaccaacttccagcccaacctccactctcaggtaccaatgatgaat
gtaaacatcccccctcccgccatcgtccccctgcccagcaacctccctctacccacggtg
aagcctggacccgtggggcatggcggtcacgtgcaaaggactcagcagagcggcccgccc
ccctccatgtccccctcccctgtcacgtcccccgtgcacatggcggggcccgcactgggg
aggctggaggcctcgcctcaccgctctcgctcgtcctccacctcgtccgaccacggaaac
ttcgccatgccctccgggcatcaggccccgtgtggcgccatgaaagttcccccacgctcg
ccgcggcctgccatggggtccccccggccgtccatgccgtcgagcccctccaccaacaaa
accgacccgctccaccagtacaaggagtcccagatgattcctgggatgggcagctcggcc
ggggctcaccagcacaccagtcccatgtactcccccaccccgtccaccccaatgatgtca
tcttccctggccccgcccagtgcttcccagaagggccaccccggactgcttgggatgccc
ctgaaccacatcctgaaccaacagaacgccgcctccttccctgccagcagcctactctca
gccgcagccaaagcacagctagcaaatcaaaacaaactgggctcctctgggaacagccct
gcaggcatgccgggcgggggtaacggagggggcggcggcgggcaccccggctccatgagc
ggccctcgaagcatggagggacacagcactttaaatgcaatgcttcccccaaacgccggc
atgctgctcaacactcccgaggccccgagcggacgggccgccctccgagacaaactcatg
gcgcagcagagggacccggcgcgcaaacggaaacagtcgtcaggtggtgccgccacccac
gacggccccaacaacatggtctacaacgtgatcagcaaaccaggcatgggagggaacctc
atgcccggccccagcgcagcagaacagttgcgtaaagtgggtcgaatggggaacctcccc
ccaaacacttccatggctcagctgctgcagtccatgagctcccagagttcccacaacctg
agcggaaacagccatcgtccaggcctgagcccggggctgggggccggcactccaggaggg
gcgcagatccactacagcgagaacgcggggatggtccccactggcggccccccacagaac
ctcatggtccagcagagacatcggggccccgcagatgccatccagcactgccagagcatg
gacgtcccagggggccacctggtctcccgtccagggcagttccccgacatgatggcgaag
atgcaggcgtcctccatgagcaactgcggtcagatggggcagggcgggccgccggtgggg
cgcaacaaccccccaccactgtcgcaccctggcccccacccttcacagcttcacggcatg
gggaggaccaacatggtagcgccgcatggaggcggagatgtgaactgcaaccagagtgtg
tctgagacagcaaacccctcatctctcagctgtggcatgggcgccctacagccacacgtc
aacgcagtgggggctcaggtttaccagcagcaggtgcaccaaagcatgcagcagggcatg
tcttcacacccggcctaccaggggcagcagcacttctccaacaacatgccctaccctgac
ggcaacgccggctccatggcctgcctctaccagaactatcagcagggagcgatgtcacat
ccacagtttggcgaggagcagcagccccaagcggagggtcatcccgtaggcgcgcctggg
tctgacaggggccccggtggaggcccggaggtggtggacgccatctacagagccgtggtg
gacgctgcgagcaagggcatgcacgtcaccatcaccaccaccgtgagcgggaccacacag
gccagccccgtgcccgccctcagcgccatgagtgccttcaccgcctccatcggggagccc
gtcaacctcccccaggcagtcaacgccgtcctgcacgggcggcaagagggagaggcccta
cagcaggcccgggcgaggcacgccaggtccggacgggcccagaagagcatggatccagga
aagaggactccagaggtccccgaggccggtgattacttccgttctcccggccgtgggact
cctagaggacagtgggatggagaggtgcagcacggaggagggttcgactcgcagaccaac
aacagcggctggaccggcgaggagatagtggaatgctccacccaagtaagaagtagtccc
tgcatggagagacctgccagtctcgcccccgcccctccgtgccccggcgacgggtccggt
gaccacaccctggccatggtccacgacaaagccttcctcgaagacggctaccggtacaac
aactgcaaccggacccctgcgaactacaaggaacacctggagcagaccgtagagcgctgc
gcccacatcaacggagccgcccagcatttcaacacccggggctacggcgatgtcctgggc
ccctcgaggcaagagctcaccggggacgaccagtcgcccagctcgtccaccagcctggag
gggccgctggccacggccaaggactacgggcactacaacggccacttcaatggcatggcc
cccagcccgtcggacaccaagagcctgagcagcgaggaggacctgcggcagccggactcc
ccctcctcagagctgctccactaccgctcccggaccttcaacatgggggagctggtgtgg
ggccagctgaagggtttccccccgtggcccgccaagctagccggggacgagcaggtgcac
ggtgccgccatgcaactgcgagaacaggccaaggtggagccagagaagcttaaaacacta
actcacgacttggaggcactggaccgagctgccaaacgaggcctgaaaccggggaaactg
aatcacttgcacgctgttttccacgaggccatcagcgagctagataagatgtcaggcaca
atctcatcgagggattgtcaggtgaagctccccaagcccaagaggaggaagatctccaga
tag
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integrated database retrieval system
