Oryzias melastigma (Indian medaka): 112156628
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Entry
112156628 CDS
T07439
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oml04054
]
112156628
Pattern recognition receptors [BR:
oml04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112156628
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_4
LRR_6
NOD2_WH
LRR_8
PYRIN
Motif
Other DBs
NCBI-GeneID:
112156628
NCBI-ProteinID:
XP_036070434
LinkDB
All DBs
Position
LG2:14856789..14925257
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AA seq
1664 aa
AA seq
DB search
MDPKESTTEPGPSDSNRIPQRLGSGPGSEPSLAPHKSYYSKDFNPDFKDISPGVEHRIQQ
RLGSGPGSEPSLVSFRSDKSRDFNPDFKDISSGVEQGQQFTKTDQSAASSYVPVKRNPSK
MDPKESTIEPGPSDSKRIQQRLGSGPGSEPSHASDRSDYSTDFNPDFKDISSGVEQIPQR
LGSGPGSEPSLASDRSDESKDNNPAFEDSSSGVEQVDQQSSETPSGPSVQQDQTQLDSIF
MLLEDNIVTFVKKELKKFEKLLIQREDDEELEGEDEEQKSSRESLMKITENFLRRMKQEE
LADRLQNRFSEEVCRHKVQSGVKKKFQCVFEGITKAGNPTLLNEIYTELYITEGGTGELN
EEHEVTQIEAASRKADRAETSIRQEELFQLPAGRQEPIRTVMTKGVAGIGKTVLTQKFTL
DWAEGKANKNIHFIFPFTFRELNVLKEEKFNLVKLVHHFFPETKEAGICSFEDFQIIFIF
DGLDECRLPLDFSKTQILTDPRKSTSVGDLLTNLIRGNLLPSARLWITTRPAAANQIPAE
CVDMVTEVRGFNDPQKEEYFRKRFRDEDQAKQIISHIKRSRSLHIMCHIPVFCWITATVL
EDLLKSREGGELPKSLTEMYIHLLVVQAKVKKVKYDGGAETDPHWTPESRKMMESLGKLA
FEQLEEGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQNKVFCFIHLSVQEFL
AALHVHLTFINSGVNLMGKKQKMYWLLSFFENNSAQFYQSAVNKALQSSNGHLDLFLRFL
LGLSLQTNQNLLRGLLTQTGSSSHTNQKTVQYIKEKISEDLSAEKSINLFHCLNELNDGS
LVEEIQQFLSSGRLSTDELSPAQWSALVFILLSSEEVLEVFDLKKYSASEEALLRLLPVI
KASNKAILSDCDLSERSCAALSSVLSSKSSRLRDLDLSDNKWQDSGIKLLSAGLGSPYCE
LETLRMKNCSLSKISCENLGSVLTSNPSNLIYLDLSENNLQDSGFLHLRVFLESPDCRLQ
TLRLEKCSLSEISCEVLGSVLRSNPSNLMEIDLSENNLLDSGFLHLRDFLNSPERKLRIL
RLKNCSLSKISCKALGTALKSNSYNLTELDLSQNNLLDSGFLHLRGFLESSNCRLQTLRL
KNCSLSEISWENLGSALKSNPSNLTDLDLSGNNLQDSGFLHLRGFLESPDCRLQTLRLEK
CSFSGISCEVLGSALTSNPYNLKELDLSMNNLTDSGFNHLRGFLESPHCRLQTLRLKKCS
LLEISCDALGSALKSNPSNLRDLDLSGNNLQDSGFLHLRGFLEIPDCRLQTLRLEKCSLS
EMSCEVLGSALKSNPSNLKELDLSENDLQGLGFGQLCGFLGNPNCRLQTLRLKNCQLSES
SCEALGSALISNPSNLTELGLSNNFLWDSGFHHLCSFLESPSCILQTLRLNRCSLSKISG
EVLGSALKSNPSNLRELDLSENNLQDAGFGQLRGFLESPNCRLHTLRLENCSLTEISCEV
LGSALQSNPSNLIELDLSRNNLKDSVLPLCGFLESPNCRLQTLRLKNCSLSKTSCENLAS
SLKSSPHTLTELDLSNNDLQDLGFYNLCSFLESSYNRLKTLRLRDCSLSKDSCTALVSVL
KTNTSYLKELDLRGNNYLQDSDVQQLQDLVKVPYIKLQTLRWKY
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaaagaatccacaactgaaccaggaccttcagactcaaacaggatcccacag
agactgggaagtggacctggatctgaacccagccttgcgccccacaaaagttactattca
aaagattttaatcctgacttcaaagacatcagtccaggagtggaacacaggatccaacag
agactgggaagtggacctggatctgaacccagccttgtgtcctttagaagtgacaagtca
agagattttaatcctgacttcaaagacatcagttcaggagtggaacaaggtcagcagttc
acaaagacagaccagtctgcagcatccagctatgtgcctgtgaagaggaacccatccaaa
atggatcctaaagaatccacaattgaaccaggaccttcagactcaaagaggatccaacag
agactgggaagtggacctggatctgaacccagccatgcgtccgacagaagtgactattca
acagattttaatcctgacttcaaagacatcagttcaggagtggaacagatcccacagaga
ctgggaagtggacctggatctgaacccagccttgcgtccgacagaagtgacgagtcaaaa
gataataatcctgccttcgaagacagcagttcaggagtggaacaagtggaccagcagagc
tcagagactcccagtggtccatctgtccagcaggatcaaacacagctggactccatattt
atgctgctagaggacaacattgtcacttttgtgaagaaggaattgaagaagtttgaaaag
cttctgattcagagagaggatgatgaggagttggagggtgaagatgaagaacagaagagc
agcagagagtcactgatgaagatcacagagaacttcctgaggagaatgaagcaggaggag
ctggctgatcgactgcagaacagattttctgaggaagtttgtcgacataaagttcaatct
ggagtgaagaagaagttccaatgtgtgtttgagggaatcactaaagcaggaaacccaacc
cttctgaatgagatctacacagagctctacatcacagagggaggaactggagagctgaat
gaagaacatgaggtcacacagattgaagcagcatccaggaaagcagacagagcagaaaca
agcatcagacaagaagagctctttcaactcccagctggaagacaagaaccaatcagaacc
gtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagccaacaagaacatccacttcatatttccattcactttcaga
gagctgaatgtgctgaaagaggagaagttcaacttggttaaacttgttcatcacttcttc
cctgagaccaaagaagcaggaatctgtagctttgaagacttccagatcatcttcatcttt
gatggtctggatgagtgtcgacttcctctggacttcagcaagactcagatcctaactgac
cctagaaagtccacctcagtgggtgatctgctgacaaacctcatcagggggaacctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctgctgag
tgtgttgacatggtgacagaggtcagaggattcaatgatccacagaaggaggagtatttc
aggaagagattcagagatgaagatcaggccaaacagatcatctcccacatcaagagatcc
cgaagcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacagttctg
gaggatctgctgaagagcagagagggaggagagctgcccaagagcctgactgagatgtac
atccacctcctggtggttcaggccaaagtcaagaaggtcaagtatgatggaggagctgag
acagatcctcactggactccagagagcaggaagatgatggagtctctgggaaaactggct
tttgagcagctggaggaaggaaacctgatcttctatgaatccgacctgacagagtgtggc
atcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttagagaggag
agaggactgtaccagaacaaggtgttctgcttcattcatctgagtgttcaggagtttctg
gctgctcttcatgtccacctgaccttcatcaactctggagtcaacctcatgggaaaaaaa
caaaaaatgtattggttgttgtccttttttgagaataattcagcccagttctaccagagt
gctgtgaacaaggccctacagagttcaaatggacacctggacttgttcctccgcttcctc
ctgggtctttcactgcagaccaatcagaatctcctacgaggtctgttgacacagacagga
agtagctcacacacaaaccagaaaacagtccagtacatcaaggagaagatcagtgaggat
ctatctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaatgatggttct
ctagtggaggagatccaacagttcctgagttcaggacgtctctccacagatgaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcagaggaagtactagaggtg
tttgacctgaagaaatactctgcttcagaggaggctcttttgaggctgctgccagtgatc
aaagcctccaacaaagctatactgagtgactgtgacctgtcagagagaagctgtgcagct
ctgtcctcagttctcagctctaagtcctccaggcttagagatttggaccttagtgacaac
aaatggcaagattcaggaattaagcttctgtctgctggcctggggagtccatattgtgaa
ctggagactctcaggatgaagaactgcagtttatcaaaaatcagctgtgaaaatctgggc
tcagtactgacgtccaacccgtctaatctgatatatctggatctgagtgagaacaacctc
caggattcaggatttcttcatctgcgtgtttttttggagagtccagactgcagactgcag
actctgaggttggagaaatgcagtttgtcagagatcagctgtgaagttcttggatcagta
ctgaggtccaacccgtctaacctaatggaaatagacctgagtgaaaacaacctgctggat
tctggatttcttcatctgcgtgattttctgaacagtccagaaaggaaactgaggattctg
aggttaaagaactgcagtttgtcaaagatcagctgtaaagctctgggcacagctctgaag
tccaactcatataatctgacagaactggacctgagccagaacaacctcctggattcagga
tttcttcatctgcgtggttttctggagagttcaaactgtagactgcagactctgaggttg
aagaattgcagtttgtcagagatcagctgggaaaatctgggctcagcactgaagtccaac
ccgtccaatctgacagatctggatctgagcgggaacaacctccaggattcaggatttctt
catctgcgtggttttctggagagtccagactgcagactgcaaactctgaggttggagaag
tgcagtttctcagggatcagctgtgaagttctaggatcagctctgacatccaacccgtac
aatctgaaagaactggacctgagcatgaacaacctgacagattcaggattcaaccatctg
cgtggttttctcgagagtccacactgcagactgcagactctgaggttgaagaaatgcagt
ttgttagagatcagctgtgatgctctgggctcagctctgaagagcaacccgtccaatctg
agggatttggacctgagtgggaacaacctgcaggattcaggatttcttcatctgcgtggt
tttctggagattccagactgcagactgcagactctgaggttggagaaatgtagcttgtca
gagatgagctgtgaagttcttggatcagcactgaagtccaacccatctaatctgaaagaa
ctggacctgagtgagaatgacctgcagggtttaggttttggtcaattgtgtggttttctg
gggaatccaaactgcagactgcagactctgaggttgaagaactgccaattatcagaaagc
agctgtgaagctctgggctcagctcttatatccaacccatccaatctgactgaactggga
ttgagcaataactttctatgggattcaggatttcatcatctgtgtagttttctggagagt
cccagttgcatactgcagactctgaggttaaacagatgcagtttatcaaagatcagcggg
gaagttctaggatcagctctgaagtccaacccatccaatctgagagaactggacctgagt
gagaacaacctgcaagatgcaggttttggtcaattgcgtggttttctggagagtccaaac
tgcagactacacactttgaggttggagaactgcagtttgacagagatcagctgtgaagtt
ctaggatcagctctgcagtccaacccatccaatctgatagaactggacctgagcaggaac
aacctgaaagattcagttcttcctttgtgtggtttcctggagagtccaaactgtagactg
cagactctgaggttgaagaactgcagtttgtcaaagaccagctgtgaaaatctggcctca
tctttgaagtccagcccacacactctgacggaactggacctgagcaataacgatcttcaa
gatttgggattttacaatctgtgttcttttctagagagttcatacaacagactaaaaact
ctgaggttgagggactgcagtttgtcaaaggacagctgtactgcactggtctcagttttg
aagaccaacacgtcctacctgaaagaattggacctgagaggaaacaactacctgcaggat
tctgatgttcagcagctccaggatctggtgaaggttccatacatcaaactgcagactctg
aggtggaagtactga
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integrated database retrieval system
