Oryzias melastigma (Indian medaka): 112156647
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Entry
112156647 CDS
T07439
Symbol
zeb2b
Name
(RefSeq) zinc finger E-box-binding homeobox 2b isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112156647 (zeb2b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112156647 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451_C
Csm1_N
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
112156647
NCBI-ProteinID:
XP_024144656
Ensembl:
ENSOMEG00000020511
LinkDB
All DBs
Position
LG2:18641361..18730990
Genome browser
AA seq
1218 aa
AA seq
DB search
MKQEIMADGPRCKRRKQANPRRKNAALNYENVVETGSETEEEDKLPVSEEDPLINGAGSP
ASLTNPEASPRGEGHGLLTKDEEDDEMRDSGVEHIWQDNDMLSASVDGTDEMKYDFDALG
SDATLQGVGNGTVKSMDCTSELEDFFAKRKLDDGDSHVVSIAECLRRGDTAIIYPEAPEE
LSRLGTPEATGPEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFA
CPLCNYTFAYRTQLERHMATHKPARDQHQLLNQEAGNRKFKCAECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLIAVNGRMRSNMKPGSSPTSASASPT
NTAITQLRQKLENGKPLGLVDHNNHLNIKTEPLDFNDYKLMMASHGFGAPGPFLNGVGGD
SPLGVHHSSTGQSPLQHLGLAGLDPQLLGYPGPLGNNLSEVQKVLQIVDNTVCRQKMDCK
PEELSKLKAYMKELGNQAEEQKQAMTSPGGPQVGLPLVNHNGATKSIIDYTLEKVNEAKA
CLQSLTTDSKRQISNIKREKANHMLDGGLDEKVPENMFTPYACQYCKETFPGPIPLHQHE
RYLCKMNEEIKAVLQPSENMMPNKPPMFMEKNNHLSSSMLSEKGLTGPINPYRDHMSVLK
AYFAMNMEPNSEELLKISIAVGLPQEFVKEWFDQRKMYEYSTTRSPPLEHRNNTDMVVGT
NNHSPPKDSLAARSPVSLLKPADHITSPSIAELQNNCDNPLRHLKNHQFGGGAKAAGKKL
DHSRSNTPSPLNLSSASSKNSHSSSYTPNSLTSEDLQAEPLDLSLPRLMKEPKHALTVKS
RPKVNSITIDHNSIPSPREHFEEPLNLAYLKKEFSGSTNNGNIEKSTSPIFGINPFAAKP
LYTSLPPHSAFPPATFMPPMQASIPGLRPYPGMDQMGFLPHMAYTYAAGAATFAEMQQRR
KYQRKPGFQGDLLDGTPDYLSGLDDMTDPDSCLSRKKIKKTESGMYACDLCDKTFQKSSS
LLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQH
MNHRYSYCKREAEEREAAEREAREKGHLEPTELLMSRAYLQGMTPQGYPELAEREAILRH
DGVNGGIREGHKEVDGTYAKIARRDEFEEEEEESKSMDTDPDTLRDEEENGEHSMDDSSL
DGKTETKSDHEDAMEDAM
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggagatcatggcggatggccccaggtgtaagaggcgaaaacaagcgaatccg
aggcgaaaaaacgcagctctcaactacgagaatgtggtggagacgggctcggagaccgag
gaggaggacaagctgcccgtgtccgaggaggaccccctgatcaacggcgcgggcagcccc
gccagcctcaccaacccggaggcgtcgccgcgcggcgagggccacggcctgctgaccaag
gacgaggaggacgacgagatgcgggacagcggcgtggagcacatctggcaggacaacgac
atgctgagcgcctcggtcgatggtaccgatgaaatgaaatacgactttgacgccctgggg
tctgatgccactctgcagggagttggaaatggtacagtcaagagcatggattgcacttca
gagttggaggacttctttgccaaaaggaagctggacgacggcgacagccacgtagtgagc
atcgccgagtgcctgcgccgcggagacaccgccatcatctacccggaagctccggaggag
ctgagccgcctgggaacgccggaggccacgggaccagaggagaatgacctgccacctgga
acgccagatgctttcgcccaactgttgacctgcccctactgcgaccgaggctacaagcgt
ttgacttctctgaaggagcacatcaagtaccgccatgagaagaacgaggagaacttcgcc
tgcccgctgtgcaactacacgttcgcgtaccgcacccagctggagcgccacatggccacg
cacaagcccgccagggaccagcaccaactgctcaaccaagaggcaggaaaccgcaagttc
aagtgcgccgagtgcggcaaggccttcaagtacaagcaccatctgaaggagcaccttcgg
atccatagcggcgaaaaaccctatgagtgccccaactgcaagaagcgcttctcccactcg
ggctcctacagctcccacatcagcagcaagaagtgcatcggcttgatagcagtcaacggc
cgcatgcgcagcaacatgaagccaggctcctcccctacctctgcgtcggcctcgcccacc
aacaccgccatcacccagctgcggcagaaactcgagaacggcaagccgctgggcctcgtc
gaccacaacaaccacctgaacatcaagacggaaccgctggacttcaacgactacaagctg
atgatggcgtcccatgggtttggcgcgccaggacccttcttgaatggagttggaggtgac
agcccactaggggttcatcacagctcgacaggtcaaagccctttgcagcacctggggttg
gctggacttgacccacagcttctaggctacccaggtccgctagggaacaacctgagcgag
gtccagaaggttctccaaatagttgacaacactgtgtgcaggcagaaaatggactgcaag
cctgaggagctctccaaactcaaagcttacatgaaggaactgggtaatcaggcagaggag
cagaagcaggcgatgacttcaccggggggccctcaggtcggtcttccactcgtcaatcac
aatggcgccaccaaaagcattatcgactacacgctagaaaaagtaaacgaagccaaagct
tgcctccagagcttgacgacggactcaaagagacagattagcaatatcaaacgagagaaa
gccaaccacatgcttgacggaggtctggacgagaaagtgccggagaacatgtttacaccg
tacgcttgtcagtattgcaaagaaacctttcctgggccgataccgctgcatcaacacgaa
cgctacctgtgcaaaatgaacgaggagatcaaagctgttttgcagcccagtgagaacatg
atgcccaacaaaccgccaatgttcatggagaagaacaaccacttatcgtcctccatgttg
tcagagaagggactcactggccccatcaacccttacagggaccacatgtccgtgttgaag
gcatattttgctatgaacatggagcccaactcggaggagctgcttaagatttccatagcg
gtcggccttcctcaggaattcgtcaaggagtggtttgatcagcgaaagatgtacgaatac
agcactaccagaagcccgccactggagcacaggaacaacacggatatggttgtcggaaca
aataaccactccccaccaaaagactctttggcagctaggtcacctgtgtctctcctgaag
cctgctgaccacatcacttccccctccatcgcggagctccaaaacaactgtgacaacccc
ctgagacatttgaagaaccaccagtttggcggcggggcgaaggctgcgggcaaaaagttg
gaccactcccgtagcaacactccttcccctctcaacctgtcctccgcatcttccaaaaac
tcccacagcagctcctacacccccaacagcttgacttcagaggacctgcaggccgaaccg
cttgacctctccctgccgagactcatgaaggagcccaagcatgcactgacggtcaaaagc
agacctaaagtcaacagtattaccattgaccataacagcatcccttccccacgagagcac
ttcgaagagcctttgaacttggcctatctcaagaaggaattctcaggctcgaccaacaat
ggaaacattgaaaaaagcactagccccatctttggcattaacccctttgctgccaagcct
ttgtacacgtcacttccaccccacagcgctttcccgcccgccacattcatgccccccatg
caggccagcatacccggtcttaggccctacccgggcatggatcaaatgggcttccttccg
cacatggcttacacttacgcggcgggggcagccacctttgccgagatgcagcagaggaga
aagtaccagcggaaaccaggtttccagggggacctgctcgacggtacacccgattacttg
tcagggctggacgacatgacagaccccgactcctgtctgtcgcggaagaagattaagaag
accgaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagagcagttcc
cttctaagacacaaatatgaacacacagggaagaggccgcaccagtgccagatctgcaag
aaggccttcaaacacaagcaccatctcatcgagcactctcggctgcactcgggcgagaag
ccgtaccagtgcgacaagtgcggcaagcgcttctcgcactcgggctcctactcgcagcac
atgaaccaccgctactcctactgcaagagggaggcggaggagcgggaggcggccgagcgg
gaggcccgcgagaagggccacctggagcccaccgagctgctcatgagcagggcctacctg
cagggaatgactcctcagggctacccggagctggccgagcgcgaggccatcctgaggcac
gacggcgtgaacggagggatcagagagggacacaaggaagtggacggaacgtatgcaaag
atcgcacggagggacgagttcgaggaggaggaggaggagagcaagagcatggacacggac
ccggacacgttgagggacgaggaggagaacggggagcactcgatggacgatagctcgctg
gacggcaaaacggaaaccaaatcggatcacgaggacgccatggaggacgccatgtaa
DBGET
integrated database retrieval system
