Oryzias melastigma (Indian medaka): 112156655
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Entry
112156655 CDS
T07439
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112156655 (obsl1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
112156655 (obsl1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_6
Ig_5
Ig_4
Izumo-Ig
C1-set
C2-set_2
V-set_CD47
SECTM1_Ig
Ig_VEGFR-1-like_5th
C2-set_3
Ig_C17orf99
Tissue_fac
fn3
Motif
Other DBs
NCBI-GeneID:
112156655
NCBI-ProteinID:
XP_024144683
Ensembl:
ENSOMEG00000014266
LinkDB
All DBs
Position
LG2:11471498..11488091
Genome browser
AA seq
2205 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVVAQCGTDATLRCQISGDPRPDVIWERKNVQILPEKRYKISEEG
KLYLLTITGVTQQDAGQYICKARNSIGETYAAASLKVEGEAPVEETEPHLGVNGLSEKEN
GVHLNGYSIVQNGVKEQEIKDENKWNDKSSEKLKDDDLPSNDKPRFLIKPLSLRVDRGED
AAFSCKLWGTPLPEVTWEKDGKKLNDIFESSHFSVTNQDGGWFQLKIYRTRMPDKGVYTC
KAVNCHGEALAGAILLVESVPEREDSRMSLSSRSNSQWSPKPRGGRLSLSKLVEEPSVSA
SKVKKFAVSEGKHAKFRCFVTGKPKPEIIWKKDGVPLEPGRRHLIFEDREGYYTLKVLYC
KVEDTGLYVCAASNALGNTLSAVHLTVKGHAVKFRRPLKDAEVKERDAAVLECEVPDETV
QAAWYLEDQRLMPSSKYAMEQKGTRRRLTIHDVGTDDDGVYLCEMPNGAKSIAELSVKGT
IMRKLPRKLEVLEGENAAFCVEVENDDMEVHWFKDGLKLHETHQTILKSFGKTHILVFVN
VAYQDSGVVTFVVGRSKTSSRLKVKATRHCPPICPAEVKMDIDRPNSALLSWEPAPNSQT
STRSIFVLEMQEVGSQEWHKCFTSETATSAEVTGDAVPCEGNYRFRVCSINKYGRSGHVE
FPKVVHLAPGPKIHRNLKSCELMEGEDAHFSIELSASMPGTWFLNSSQLKHGGRHSIQQK
RTTHSLVIHKTQMAEDMAEITFIANGVRDSAVLKVKPVVANFSPLSEVDLNKTVDTGDAI
VLYCEVSHPLANVSWFKDGNALEVMEGLNIQAEGNMRRIVIQSANASHSGVYTCQMPGDL
VTFNVDVAGPPVEFTPVQEEELIKSSMELDPVVLLCHVSREDAEVKWYKDGQEVQASDNI
TLQVEGTMRRLIIRSAESSDAGCYTCQAGKNNMVFTVNVKEPPVVIVEPKEDVVMKISIP
EEINLQCELSRSNGKVQWLKDGEEVQESDSVRLMSEGPYRKLTILSSCTEDSGEYVCETD
GDSVFFQVTATEPPVRIISPSESEVEVTHLASERLELCCEISKEDAPVRWYKDNLEVEAG
PNLILEEDGAKRLLVIPLATVDDTGEYVCDTEDDSMAFLVTVAEPPIILTRPKNIPEKLV
STAGKPIVLEIEVSRPTAEVKWCFNGKEVKQSTNITIAEDEFIRRLTVHSPTPEDSGKYT
CYATDDKIDFQVKVLEPPVSILRKSEIKTDLKFMVSDDIVLECELSRDNAKAKWYKDGVR
VEGDERFCEEEEGAFRSLVILNAELTDSGEYFLDVGDDSISFQVSVKEPPVTIVGNSYDP
DHQEMVAGDDLILACEVSRANAPVSWYCNDKLLMCDSRTSIESYGAVRKLIISCVQPSDS
GKYTCDATDDKMICTVRIQETPVTFVNKEEDIVVTGYEAESVTLTSYVSKESALVRWLKD
WTPVEGERFKTLMEGHTRTLTIEPLRRSDAGEYTCDANTDQLHFSLLVKEMRIKFVRPLR
DTVAHADGMVTLRCEVCKPKADVQWLKNGEEVVPSRRFSIRADGVERSLTIHRLTREDAG
EYTCESRDDRTSAVLRVKMPRVVEFLTELHNTTVMEGEDATFKCVVSPEDVQLVWLMDNE
PIALGDRFQATQNGLCHTLVIKKCQLLDNSKISAEAEGKMTKASLKVQEAQVMFTKKMEA
VMAEEFGEATLETEISLETGEVQWMRQGVVIQSGPRYTVAQNGCKRSLTIRNLTLSDRGT
YRCETLHDRAQVKLNVEPRKISIRKGLTDQETVERETASFEVELSHTDVEGIWQKDGIRL
KPNNQFRVSANGFVHGLTLSNLSMEDTGTIVFSAEGVRTTARLTVKETPVSILRPLADVR
VEEEFPATLECEFSRQNVEVKWLKDGAELRPGKNYRIYSMGRKRFCQILLCSRADSGCYT
CDTGEINTSCSLQVYEHELVIVKELEDLYIKEEQNAVFMCEVSLEDVNGEWYKNDQRIRP
SSTTKMRTEGTKHFLLICNVTPEDAGEIHFAARNLKSTAYLEIEELPVSIVKPLRDRTAL
EKHRVILECTVSSPRSSATWYKGKRELESSDRVEIVADGCSHKLVIHQVDVEDEGTYSIE
VGEHTSQAKLLVEAQALVMVKELQDVEVTEPEPASFQCEVSVAINKPPVWTFNGVTLQAG
PDIRMENHGTVHKLTLRNTTVDMSGIVKFTMGKAKSSATLSVLEN
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggatatctttggtggtgctcctcgtgtcctcggttatccgcgccctgtggtggcacaa
tgtggaacagacgcaaccctgaggtgccagattagcggagacccgcgtccagatgtcatc
tgggagcgtaaaaatgttcaaatcttgcctgaaaaacgatacaagatctcagaggaagga
aagctgtacttgctgactataactggagtgacccaacaggacgccggccagtacatctgc
aaggctcgaaatagcattggggaaacgtatgcagcagcttctcttaaagtagaaggagag
gccccggtggaagaaacggaaccccacttaggggttaatggtctttcagaaaaagaaaat
ggagtgcaccttaatggatacagtatagtgcaaaatggtgtaaaggagcaagaaataaaa
gacgagaacaagtggaatgataagtcaagtgaaaaacttaaagatgatgatttaccgtcc
aatgataagccacggtttctcattaagcccttatcgcttcgtgttgatcgcggagaagat
gctgcattctcttgcaaactctggggcacacctctacccgaagttacttgggaaaaagat
gggaaaaagctgaatgatatttttgagagctcacacttcagcgtgaccaatcaggatggc
ggctggttccaactcaagatctacaggactcgcatgccagacaagggtgtttatacctgc
aaggcagtaaactgtcatggagaggccctggctggggctatcctgcttgtagagtctgtc
ccagaaagagaggacagtagaatgtccttaagcagtcgttccaacagccagtggtcacca
aagccaagaggcgggcggctgagtttgtcgaagctggtggaggagccttcggtcagtgcg
tccaaggtgaaaaagtttgcagtctcagaaggaaagcatgccaagtttcgctgctttgtg
acaggcaagccaaagcctgaaataatctggaagaaagacggagttccccttgagcctggc
aggcgtcatttgatctttgaggacagagagggatactacactttgaaagttctgtactgt
aaggtggaggatacggggctgtatgtgtgtgctgcatcaaacgctctaggaaataccctt
agtgctgtccacctgactgtgaaaggtcatgctgtaaagttccgacggccattaaaggac
gcggaagtgaaggagagggatgcggctgtgctggaatgtgaggttccagatgagacggtc
caagcggcatggtaccttgaagaccagaggctgatgcccagcagtaaatacgcaatggag
cagaaaggaacacggagaagacttactattcacgatgttggaacagatgacgatggagtc
tacctatgtgaaatgcccaatggtgcgaagagcattgcagagctatcagttaaaggtact
attatgcgaaaacttcctcggaaactggaggtcctggaaggcgagaatgcagccttctgc
gtcgaggtggaaaacgacgatatggaggtccactggtttaaagacggcttgaagctccat
gagacgcaccaaaccatccttaagtctttcggcaaaactcatattctggtctttgtcaat
gtggcctatcaagactccggggtcgtgacatttgtagtcggaagatccaaaacatcatct
cgacttaaagttaaagccacaagacactgtcctcccatttgcccagcggaagttaagatg
gacattgacaggcccaatagtgctttactcagctgggagcccgcccccaacagccagacc
tccaccagatccatatttgtgctggagatgcaagaggtaggctcacaagagtggcacaag
tgtttcacctcagagacagccacctcggcggaggtcaccggtgacgctgtgccatgtgaa
ggaaactaccgcttccgtgtctgcagcatcaacaagtacggacgaagcggtcatgtagag
tttccaaaagttgtccatcttgcccctggacctaaaattcacaggaatcttaagagctgt
gagctgatggaaggggaagatgctcacttctccatcgagttgtcagcgtcaatgcctgga
acttggtttctaaacagttctcaattaaagcacggaggacggcattcaatacagcaaaag
cgaacaacccactcacttgtgattcataaaactcaaatggctgaagacatggccgaaatc
acgttcatagccaacggagtcagagattcagcggtactcaaggtcaaacctgttgtggca
aatttcagtccactgtctgaggtagatctcaacaagacagtggacacaggtgatgccatc
gtcctctattgtgaggtctcccatcccctcgcaaatgtttcctggttcaaagatggcaat
gccctggaggtaatggaaggcctcaacatccaggcagagggcaatatgcggagaatcgtg
atccagtctgctaatgcttcacactcgggagtctatacttgtcaaatgcctggggatctt
gtcacttttaatgtagacgttgcaggcccccctgtagaatttactccagtgcaggaagag
gagctcattaagagcagcatggagctggatccagtagtgctgctgtgccacgtctccaga
gaagatgctgaagtcaaatggtataaagatggtcaggaggtccaggcaagtgacaacata
actctccaggtggaaggaaccatgaggaggctaatcattcgctctgcagaaagctcagat
gctggttgctacacctgccaggcaggaaagaacaacatggtgttcactgtcaatgtcaag
gaacctccagttgtgattgtggagcctaaagaggacgtagtgatgaagatatccataccg
gaggagataaacttgcagtgcgagttgtctcgctccaatggaaaggtgcaatggttgaag
gatggcgaggaagtgcaggaaagtgactcagtccgactgatgtcagaaggcccttacaga
aaactgaccatcctttcaagctgtacggaggacagtggggagtatgtctgtgaaactgat
ggagactctgtcttcttccaggtcactgcaacagaaccacctgtgagaattatttctcca
agcgagtcggaagtagaagtgacacacttggcgtcagagaggctggagctatgctgtgag
atctccaaagaggatgctccagttcggtggtacaaagacaatctagaagtagaggcgggt
cctaacttgatcctggaggaggatggagccaaacgactgctagttatacccttagcgaca
gtggacgatacaggggagtatgtatgtgacactgaagatgattctatggccttcttggtt
actgttgcagagccgccaatcatacttactcgacccaaaaacataccggaaaaactggtt
agcacagcgggtaaaccaatagttttggagattgaagtgtcgcggccgacagcagaagtc
aaatggtgctttaatggcaaagaagtaaagcaaagcaccaacatcaccatagcagaagat
gagttcatccgccgactaaccgtccactcgccaactccagaagattctgggaaatatact
tgctacgcaaccgatgacaaaatcgacttccaagtcaaagttttagagcctccggtgtcc
atcttaagaaagtcagagatcaagacagacctgaagtttatggtttcagatgacattgtc
ctagagtgtgagctctctagggataacgctaaagccaagtggtacaaggatggtgtccgt
gtagagggtgatgaaaggttttgtgaggaggaagaaggagcattccgctcacttgtcatc
ctcaatgctgagctcacggattcgggagaatacttcttggatgttggagatgacagtatc
agtttccaagtttcagtaaaagagccaccagtgaccattgtaggaaactcgtatgaccct
gatcaccaggagatggtggcaggggacgacctgatacttgcctgtgaagtgtcccgtgcc
aatgcccctgttagctggtactgcaatgacaaactgctcatgtgtgattcccgcacttcc
atcgaaagctacggagcggtgagaaaacttataatctcctgcgtccaaccatctgactca
gggaagtatacttgtgatgccacggacgataagatgatctgcacagtcaggattcaagaa
actccggtaacatttgtgaacaaggaggaggatattgtcgtgacaggctacgaagcagag
agcgtgaccttgacaagctatgtgtccaaggaaagtgctcttgtgcgttggcttaaagat
tggacacctgtcgagggcgaacgatttaaaaccctcatggaaggtcatacacgtactctc
accattgagcccttgagacgttctgatgccggcgagtacacgtgtgatgctaacaccgac
caactccacttcagtctgctggttaaagagatgagaatcaagtttgtaaggccgctccga
gacactgtggctcatgccgatggcatggtgaccctacggtgtgaggtttgcaaaccaaaa
gcagatgtccagtggctaaaaaatggtgaggaggtggtgccaagcagaagattctccatc
cgggcagatggggttgaacgaagtttgactattcaccgtttaaccagagaagatgcgggc
gagtatacttgtgagtccagagacgaccggacctctgcagtactgagagtgaaaatgcct
cgggtggttgagtttctcactgagctccacaacactactgtgatggaaggagaagatgcc
accttcaagtgtgtcgtctctcctgaggatgtccagttagtctggctcatggataatgag
cccatcgcgttgggtgatcgtttccaagcaacccaaaatggcctgtgtcacaccttagtg
atcaaaaaatgccagctgttggacaactcaaagatttcagcagaagctgaaggaaagatg
accaaagccagtctcaaagttcaagaggctcaggtcatgttcacaaagaaaatggaagct
gttatggcagaggagtttggcgaagccaccttggaaacagagataagcctggagacaggc
gaggttcaatggatgaggcaaggggtggtaatccagtctggcccccgctacacagtggcc
caaaatgggtgcaaacgcagccttaccattcggaacctgaccttgtcggaccggggaacc
tatcgctgtgagaccctgcatgaccgagcgcaggtcaaactcaatgtagaacctcgaaaa
atctccatccgcaaaggcctgactgaccaagaaacggtggaacgtgagaccgcctctttt
gaggtggagctttctcacacagacgtggaaggtatttggcagaaagacggcatccgactg
aagcccaataaccagttcagagtgagcgccaatggcttcgtccatggtcttaccctgtcc
aatctgtctatggaggacacgggtaccatcgtcttctcggctgaaggggtgcgcaccacg
gcaaggctcactgtcaaagagacgccggtgtctatcctgaggccactcgctgatgttcgc
gtggaggaagaatttcctgccactttggaatgtgaattctcaagacaaaatgttgaagtc
aaatggcttaaggatggggccgagttgaggcctggaaagaactaccggatctattccatg
ggtcggaagcgcttctgccagatcctgctatgttcccgggcggactcgggctgttacaca
tgtgacacgggggaaatcaacacttcctgttcactgcaggtgtatgagcatgagctggtc
attgtaaaagagctcgaggatctgtacataaaagaagagcagaacgccgtcttcatgtgt
gaagtttctttggaggatgtgaatggagaatggtacaagaacgaccaacggattcgaccc
tcgagcacgacaaaaatgcgcacagaagggaccaaacattttctgctgatctgtaatgtc
acgccagaagacgcaggagaaatccattttgcagccaggaaccttaaatcaacagcgtac
ctggaaatcgaagagcttccagtttctatcgtaaaacccttacgagatagaacggcttta
gagaaacaccgtgtcatcctggaatgcacggtctcctcgccacgcagtagcgcaacctgg
tacaaagggaaacgggagcttgagtcgtcggatcgggtggagatcgttgcagatggctgc
tcccacaaactggtgatccaccaagtggatgtggaggatgaaggcacctacagcattgag
gttggggagcacacttcccaagcaaaacttctggttgaagcccaggcccttgtgatggta
aaagagctgcaagatgtggaggtgacggagccggagcccgcctctttccagtgcgaggtg
tcggttgccatcaacaagcctccagtttggactttcaatggagtgacgctccaagcaggt
cctgacattcgcatggagaaccacggaactgttcacaagcttaccctgaggaacaccacc
gtggacatgagtggcatagtcaaatttacaatgggcaaggctaaaagcagtgcaaccctc
agtgttttagaaaactaa
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integrated database retrieval system