Oryzias melastigma (Indian medaka): 112156672 Help Entry 112156672         CDS       T07439                                  Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oml04147]     112156672    00535 Proteoglycans [BR:oml00535]     112156672    00536 Glycosaminoglycan binding proteins [BR:oml00536]     112156672 Exosome [BR:oml04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    112156672 Proteoglycans [BR:oml00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    112156672 Glycosaminoglycan binding proteins [BR:oml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112156672 SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer DUF959 DUF1554 Motif Other DBs NCBI-GeneID:  112156672 NCBI-ProteinID:  XP_024144710 LinkDB All DBs Position LG2:14669630..14709044 Genome browser AA seq 1351 aa AA seqDB search MLRIWLLVLVLCAGSSRAFWFFAQETTEAPRETRGTTGSTTTNAGSIKAKETKENTTLSR VGEEIINVATGIQKFVKDWDATPTTWTTTEADTKKTEKPHWMGKTEESGVSLLQLIGDTP PEGITKVTTEEGVAYEFSSSAVMGQLAVVHVPNPFFRHFSLIFHIKPSSPAASVLFAITD GSQGIMYIGVKLGPVQSGSQTLHFFYTEPDSGSSYEAASFDVPPLVNTESHFALSVYEDA VSFFMDCEEVPQVVKFERSPDPMELDKAAGIFVGQAGGADPDKFEGTMFDFKLVGDPLAA ERFCDSDGYPGESSGDLGSGDMEKKDQVKVKNTVLPLHPVPEPPFLPSKVSKTGPSRAKG EKGDRGQKGSKGDRGPSGPKGEPGFSSGTGFSSQGGTQGQKGEKGRMGIPGTGYPGKTGM RGAQGPPGPPGPPGPASEMTKLEDGTVVQKVVGPPGPAGPAGPEGPAGPSGEDGEPGDPG EDGKLGPPGPQGVPGIPGIPGMKGEKGEAGEGQPGPRGPPGPPGPGPDRGDVPTFVDMEG SGFSHLGRVQVVRGSPGPPGPPGPPGPPGVSSTGSVGPDEAPGLPGLPGRPGPQGPSGEK GDSGELGPPGPTGEKQDEQDSNFFNTFFSYFAPSSTGSQGDPGQTGTPGLTGLAGLPGPM GPVGPPGPPGPPGPPYHGDLNGLPGLRGPPGPQGPPGIAGLPGKPGLPGSHGNKGADGPR GPPGIPGANGYLGLPGLKGDPGEKGERGLPGRDGGPPGPPGPPGVPGEFTYVSGRHQITE QKGDKGDPGPPGYAVKGEKGEPGIIMGPDGNPLYLGGLSGKTGDKGLPGPVGPPGPYGPP GIKGEIGLPGRPGRPGLNGAKGEKGDSDTRYPYNNRVQGRPGPPGPPGPPGPPGLPVPID GAHGYNENNRFYAAKGDKGDRGPPGQLEIPGFGSSFDFYTLKRELKGEMGLKGEKGEPAG GYYDPRYGYGAAGPPGVPGPPGPKGDSIIGPPGNPGLPGQPGRGYDGRPGPPGPPGPPGP LLTGPYDRIQTVSIPGPPGPPGAPGHPGLSSGVTMLRSYETMAATGRRHPEGSLVYIIDR RDLYLRVQDGVQQVQLGNYIPLPSVDDNRVAVVEAPHTPYSSDHSRTPTHVDPPNPPYND PRYLPDSRQNFDSRYPSRTNPSYPISADERLSYHQHNGRRALHVVALNTPQTGSMRGLIG VDAMCYKQAQAIKLKGTFRAFLSSTLQDLYSIVHSAQRSGVPIVNLKDEVLFDSWTDMFK DRRMNENVSIYSFDGKDVLRDDTWREKMVWHGSTREGQRDVNHMCESWRVSDQAVTGMAA SLLRGSFTQQSPSSCSSSYAVLCIENSVTEY NT seq 4056 nt NT seq  +upstreamnt  +downstreamnt atgttgaggatatggttgttggtcctggtgctctgcgctgggagctcgcgggccttttgg tttttcgctcaagaaaccacagaggccccaagagagaccagaggaaccacaggttctacc acaacgaacgctggtagcatcaaggcaaaggaaacaaaggagaacaccaccttgtccagg gtgggggaagaaatcatcaatgtggctacaggtattcagaagtttgtcaaggactgggat gctaccccaaccacctggactaccacggaggctgacacaaagaagaccgaaaagccccat tggatgggaaaaacagaagaaagtggcgtttctttgctccagctgattggagatactcca ccagaagggattactaaagtcaccacagaggaaggagtcgcgtacgagttcagctcctcg gcagtcatgggtcagctagccgtggttcatgtccccaacccttttttccgtcacttttcc ctcatctttcacatcaagccctccagccccgccgcctcagtcctctttgccatcacagat ggctcccagggcatcatgtacatcggggtcaagctgggtccagttcagtccggtagccaa acgttgcatttcttctacaccgagccggactcggggagttcctatgaggcagccagcttt gacgtgccaccgctggtaaacaccgagagtcattttgcgctctccgtctatgaggatgcg gtgtctttcttcatggactgtgaggaggtgcctcaggtggtgaagttcgagcgatcacca gatcccatggagctcgataaggccgctgggatctttgtcggccaagcagggggtgcggac ccagacaagtttgagggcacaatgtttgacttcaaactggtaggagatcctcttgcagct gagcgtttctgcgactctgatggctacccaggcgaaagttctggggatcttggcagtgga gatatggaaaagaaggatcaagtaaaggtaaagaacaccgtactccctctccacccggtt cctgaacccccatttttaccctcgaaagtctccaaaacaggtcccagcagagctaaaggt gagaaaggtgacagaggacagaaaggatcaaagggagatcgaggcccctcgggaccaaag ggagagcccggtttcagctcaggtactggtttctcttcacagggaggaactcaaggacag aagggagaaaagggaagaatgggtattcctggtactggataccctggtaagactggaatg cgtggtgctcaaggacctcccggacctcccggtcccccgggacctgcatccgagatgacc aaacttgaagacggcactgtagtgcagaaggtggtcgggccaccgggaccagctgggccg gctggtcctgaaggacctgcggggccttcaggggaggatggagagcctggtgatcctgga gaggatggaaaacttggacctcctggtcctcaaggtgttccaggaattccaggtattcct ggtatgaagggtgaaaagggtgaagctggtgaaggtcaacctggacccagaggcccccca ggtccaccaggacctggacctgacagaggagatgtccctacatttgttgacatggagggt tcagggttctcacacttaggaagagtccaggttgttcgtggctcaccgggtccaccaggt cctcctggccctcctggacctccaggggtctctagtactggatcggtgggacctgatgaa gcacctggtcttccaggcctccccggtcgacctggtccacaaggacccagtggagaaaag ggtgatagtggtgaacttggtcctccaggaccaactggagaaaagcaagacgaacaagac tccaactttttcaacaccttcttttcctattttgctccatcttctacgggatcacaaggt gatccaggccagactggtacaccgggtttgacgggtctggcaggtcttcccggtcccatg ggaccagttgggcctccaggcccccctggaccaccggggccaccttatcatggtgacctt aatggcttacctggactcagaggtccccctggacctcagggcccacctggtattgcaggt cttcctggtaagccaggtttgcctggtagccatggaaacaaaggggctgatggtccacga ggtcctcctgggatccccggggcaaatggatacctgggactgccaggtctaaaaggagat cccggggagaaaggagaaaggggtctccctggacgagatggcgggccacccggacctcca gggcctcctggagttccaggagagtttacttacgtgtcaggaagacatcagattacggaa caaaaaggagataaaggggatccaggtcctccaggatatgcagtgaagggagagaagggg gaacccggcatcataatggggcctgatgggaatcctttatacttgggaggcctgtcagga aagacgggggacaaaggactccctggcccagttggaccccctggtccttatggccctcca ggtataaagggagagatcgggctccctggaagaccgggacgtccaggactgaatggtgcc aaaggagaaaaaggagattcagacacaagatatccatataataatcgtgttcagggtcgc ccgggtcctccaggaccccccggacctccaggacctcctgggcttcctgtccccattgat ggagctcatggatataatgagaataatagattttatgctgctaaaggggacaaaggggat cgaggacctccaggacaattagagattccaggttttgggtcaagctttgacttttacacg ttaaagcgtgagctgaaaggtgagatgggcttgaaaggagagaaaggggaaccagctggt ggatactatgacccaagatatggatatggcgccgctggccctccaggggttcctggaccg cctggacccaaaggtgactcaatcattggtccaccggggaatccagggctgcctgggcaa ccaggaagaggttatgatggtcgacccggacctccaggcccaccaggtcctccaggacca ttgctgaccggcccgtacgaccgcatacaaaccgtgagtattcctggccccccaggacca cctggagctccaggacatcccggactctcttctggtgtgacaatgttgagatcttacgaa accatggcggcaacagggaggagacaccctgaaggttcgctggtgtacattattgaccgg agagacctctatctacgagtccaagacggagtccaacaagtccagcttgggaactacatc cccttaccaagtgtagatgataatagggttgcagttgtggaagctcctcacactccatac tcgtcggatcactccagaaccccgacccatgtggacccacccaaccctccctacaacgat ccacgatacctccctgattccaggcagaacttcgattcccggtacccttcgcggacgaat cccagctatccgatttctgcagatgaacgcttgtcataccaccaacacaacggcagaaga gcgcttcacgtagttgccctcaacacacctcaaaccggaagcatgcgcggcctcattggc gtcgacgccatgtgctacaagcaggcccaggccataaagttgaaggggacgtttcgggcc tttttatcctcaacacttcaggatctctacagcatcgtccacagcgctcaaagaagcggc gtacccatcgtcaatctgaaggatgaggttctctttgatagttggaccgacatgtttaaa gatcgcagaatgaacgaaaacgtctccatctactcgttcgacggcaaggatgttctcaga gacgacacatggcgggagaagatggtgtggcacgggtcgactcgcgaggggcagcgtgac gtgaaccacatgtgcgagtcgtggcgcgtcagcgatcaggcagtgacgggcatggcggcc tcacttctgcgaggcagcttcacgcagcaaagccccagcagctgctccagctcctacgcg gtgctgtgcatcgagaacagcgtcacagaatactga

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