Oryzias melastigma (Indian medaka): 112156678
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Entry
112156678 CDS
T07439
Symbol
ahr1b
Name
(RefSeq) aryl hydrocarbon receptor 1b
KO
K09093
aryl hydrocarbon receptor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112156678 (ahr1b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112156678 (ahr1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
112156678
NCBI-ProteinID:
XP_024144724
Ensembl:
ENSOMEG00000019719
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All DBs
Position
LG2:complement(17549810..17585380)
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AA seq
831 aa
AA seq
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MYAGRKRRKPAQKGAKPPPAEGAKSNPSKRHRDRLNSELDRLASLLPFPEDVISSLDKLS
ILRLSVSYLRTKSFFSVALKNQPPNGVNHQDGGFKAAAAADSQIPEGELLLQALNGFVLV
VTSEGIIFFCSHTILDYLGFHQTDVMHQSVFELIHTEDQQEFRRNLHWALNPPVSAGPPI
DPAGGDLASSSSPCPVSYNPEQLPPENSSFLERAFVCRFRCLLDNSSGFLPLNIQGRLKF
LHGQSRQPSDSERGSPPQLALFAIATPLLPPAILEIRTKNMIFRTKHKLDFTPMACDAKG
KIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTKENRWKWVQ
ANARLVYKSGKPDYIIATQRPLAEEEGGEHLRKRSMHLPFTFATGEALLYQTAHPLLGFP
DPCQDKAKGGKPKKSKVGGGSSSSEELNPKSLLEVLMSQDESVYVCQPDPEPKTSISALC
GSSDGLDGLLSSSWNAAPNGEAAAACDGKPCFDPLLATLDSLSLDGREACSNSELFSALE
NLGLNAEDLELLLLDERMIQVELDPAHIPTLTDFLSNDEILSYIQDCLENSGPGEGQESR
GGSAPQQPAAAPPIMQLSQQMQQHMKAPPGDPVGVPHAAWLENHHHHGNHIHQLNGQQPP
LHPLLEPAQHWSLHPGAGTAQLGFQNPLQLPVNGSCVPNGHAVFPPNVELVHPDYSAADS
FTAPDPCGHQNPAAWNYQLQDQNRSPAAELEQLLALADPQLGLPPAETYGTFDATPHRKV
ENGCLHGAANGAYVRTCLLPNANGAAPCDLGVSCSDPRPALHDPQKSGFFL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgggcgcaaacgcaggaaacccgcgcagaaaggggccaaaccccctcctgcc
gaaggcgccaagtccaacccgtccaaacgccaccgcgaccgcctcaactctgagctggac
cggctggccagcttgctgcccttccctgaggatgtcatctccagcctggacaagctgtcc
atcctgaggctcagcgtcagctacctgcgcaccaagagcttcttctcagtggcgctgaag
aaccagccccctaacggcgtcaaccatcaggacgggggctttaaggcggcggcggctgca
gacagtcaaatccctgagggggagctgctgctgcaggctctcaacggcttcgtcctggtg
gtgacgtctgaaggcatcatcttcttctgctcccacaccattctggactacctgggcttc
catcagactgatgtgatgcaccagagtgtgtttgagctgatccacactgaagaccagcag
gagttcaggaggaacttgcactgggccctcaaccccccggtcagcgcgggaccccccatc
gacccggcaggcggagacttggcgtccagcagctccccctgccccgtgagctacaacccc
gagcagctgcccccggaaaactcctccttcctggaaagagccttcgtctgccgcttccgc
tgtctgctggacaactcgtccggcttcctgccactgaacatccagggcagactcaagttc
ctccacggtcagagccgccagccaagcgacagcgagaggggctcgccgccgcagctcgcc
ctgttcgccatcgccacgcccctgctgcctccggccatcctggagatccgcaccaagaac
atgatcttcaggaccaagcacaaactagacttcacccccatggcctgtgacgcaaagggt
aaaatcgtcctgggctacaccgaggcggagctgagggtgcgaggctccggatatcagttc
atccatgccgccgacatgctttactgcgccgaaaaccacgtccggatgatcaagacgggc
gagagcggcctcaccgtcttccggctcctcaccaaggagaacagatggaagtgggtccag
gccaacgcgcggctcgtctacaagagcgggaagccagactacatcatcgccacccagagg
cctttggcggaggaggagggaggcgagcatctgaggaagaggtccatgcacctgcccttc
accttcgccacgggggaggcgctgctctaccagacggctcacccgctgctcggctttccc
gacccctgccaggacaaggccaaaggcgggaagcccaagaagagcaaagtgggcggcggc
tcctcctcctccgaggagctgaacccaaagtcgctgctggaggttctgatgagtcaggac
gagtcggtgtacgtctgccagccggatccggagcccaagacgtccatcagcgccctctgc
ggcagttcggacggacttgacggtttgttaagcagcagctggaacgcggctcccaacggg
gaagcggcggcggcgtgcgacggtaagccgtgcttcgacccgcttctggccacgctggac
tctctgtctctggacgggagggaggcgtgctccaacagcgagctgttcagcgccctggag
aacctgggcctgaacgccgaggacctggagctgctgctgctggacgagaggatgatccag
gtggagctggaccccgcccacatccccaccctcactgacttcctcagcaacgacgagatc
ctctcctacatccaggactgcctggagaacagcggcccgggggaggggcaggagagccgg
ggcgggtcggcgccacagcagcccgccgccgccccgcccatcatgcagctgtcgcagcag
atgcagcagcacatgaaggctccacccggcgacccggttggggttcctcacgccgcctgg
ctggagaaccaccatcaccatggaaaccacatccaccagctgaacggacagcagccgccc
ctccaccctctgctggagcccgctcagcactggagcctccatcccggcgccggaaccgcg
cagctgggcttccagaacccgctccagctgcccgtgaacgggtcctgcgtccccaacggg
cacgccgttttcccgccaaacgtggagctcgtccacccggattacagcgccgccgattcc
ttcacggcgccggacccctgcggccaccagaaccccgccgcctggaactaccagctgcag
gaccagaaccgcagcccggctgccgagctggagcagctgctggctctggcggatccacag
ctcggcctgccgcccgccgagacctacggcaccttcgacgccacgccacaccgcaaggtg
gagaacggctgcctccacggcgctgcgaacggcgcctacgtcaggacctgtttgctaccc
aacgccaacggcgcggcgccgtgcgacctcggggtctcctgctctgacccgcggccggct
cttcatgacccccagaaatccggattctttctttga
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