Oryzias melastigma (Indian medaka): 112156684
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Entry
112156684 CDS
T07439
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112156684 (hmg20b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
112156684 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
PI3K_P85_iSH2
MlaC
DUF4164
Motif
Other DBs
NCBI-GeneID:
112156684
NCBI-ProteinID:
XP_024144729
Ensembl:
ENSOMEG00000013474
UniProt:
A0A3B3DJL3
LinkDB
All DBs
Position
LG2:complement(12168785..12172742)
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AA seq
292 aa
AA seq
DB search
MGGIKQEHADASQQVRAPHAPDQAQEEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREQMRARHPDLPFPEITKRLGAEWTQLAPNDKQRYLDEAEREKVQYAQELKEYQQTEAF
QISSAKIHDKKIKKEDPPVGFGGPGSSLVKAADIPSRFDIPIFTEEFLDQNKAREAELRR
LRKANIEFEEQNAVLQRHIKDMNSAKERLEAELGQDEKQTQALHQHLLAIKHSLVSSLSA
VPLPDTGETASLGNLDSYLSRLSGVLEGNPHKHRALVNQLTEVLSHIDSEKL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaatcaagcaggagcacgcggacgcttcccagcaggtccgggctccgcacgcg
ccggaccaagcccaggaggagcccaagaagagaggctggccaaaggggaagaagaggaaa
aaggttcttcccaacggtccgaaggcgcccgtaaccggatacgtccgcttcctgaatgag
cggcgggaacagatgcgggctcggcaccccgacttaccgttcccagaaatcaccaagagg
ctgggagccgagtggacgcagctggctccgaacgacaaacagcgttacctggatgaagcg
gagcgggagaaggtgcagtacgcccaggagctgaaggagtatcagcagaccgaagccttt
cagatcagcagcgccaaaatacacgacaagaagatcaagaaagaagaccctccggtcggc
ttcggtggcccaggatcctctttggtgaaggctgccgacatcccgagccggtttgacatc
ccgatcttcacagaggagttccttgatcagaacaaagcgcgagaggcggagctccggcgg
ctccgaaaagccaacatcgagtttgaagagcagaacgcggttctgcagcgacacatcaag
gacatgaacagcgccaaggagcgcctggaagctgaactgggtcaggacgagaagcagacc
caggcgctccaccagcacctgctggccatcaaacactcgctggtcagcagcctttcggcg
gtgccgctaccagacacgggcgagacggcgtctctgggtaacctggactcgtacctgagt
cgtctgagcggcgttctggagggaaacccgcacaaacaccgcgccctggtcaaccagctg
actgaagtgctctcgcacatcgacagtgagaagttatga
DBGET
integrated database retrieval system
