Oryzias melastigma (Indian medaka): 112156690
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Entry
112156690 CDS
T07439
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a isoform X2
KO
K20211
prospero homeobox 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112156690 (prox1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
112156690 (prox1a)
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Gene cluster
GFIT
Motif
Pfam:
HPD
AATF-Che1
NifQ
Motif
Other DBs
NCBI-GeneID:
112156690
NCBI-ProteinID:
XP_024144740
Ensembl:
ENSOMEG00000014454
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Position
LG2:11234561..11284985
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AA seq
861 aa
AA seq
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MPDHDNATLLARQTKRRRVDIGVKRTVGSVIFTRARETLLDRMNPTHCSDQDGDCPLVGH
GHGSANGDGEKSNVLRKLLKRANSYEDAIMPFSGATIISQLLKSSIGKNGGSDSGFQGSG
ALSSGGSEIQNEDACSNSSRDQDSPSDCLSPGPHHPPPSSSSFGRPQPTSNHSSSQTLSL
STFDLDRLSDEHLRAKRARVENIIRGMSHSPLVRTSAGDQDGLRESENGHRGDGGGHNAN
PSSLLSSPGSRGGVVGVAEVYRENKRKQRLPQQQHSFTQLVCSRQEQRQEERRQLKLQLE
DMQKQLRQLQEKFYQIYDSETEEEEENGEGREGERGGEREEDGNLSEDSIRSDGLEERHR
DRGRHGHDDLSDLDPGLFLDRARALLREQALIDGDLEEDTDSRGEEERSGDRGMKRRAAA
GGGRQLAETLKQELNCAVSQVVDTVVKGFSSPKQAAAHHGCHSSTPAAPSSSSNSSSSCP
PPFGPLPPLTPDSRFGGGTMGLNLNGDGSPTPNYHSNQRLHCFGDVIVPSPLDSFGGLSG
RLSGVPTPNDQTEALPLVVRKNGPDNTSHTLPPPPPPHHPSLHPSPLTASLGFSPPSFRH
PFPLPLMGYPFQNPLGSHGYPPGPKDHHQSSPDSMDITREAVSLRTKMASLGGGHMGHHH
HRQSSPNQHGSESLSLSLIKSECGDLQDMADISPYSGSTIQEGLSPNHLKKAKLMFFYTR
YPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGAEELTVG
RDAELFRALNMHYNKANDFEVPDRFLEVAQVTLREFFNAIVAGKDADPSWKKAIYKVICK
LDSEVPEVFKSPNCLQELLRD
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcatgacaacgccaccctcctagcaagacaaaccaagcgccgacgcgtggac
atcggggtgaagaggaccgtggggagcgtgattttcacccgcgcgagggagacccttctg
gacaggatgaacccgacgcactgctccgaccaggacggagactgcccattggtgggccac
ggccacgggagcgccaacggggacggagagaagtccaacgtcctgaggaagctgctgaag
agggccaactcgtatgaggacgccattatgcccttctccggcgccacaatcatctcccag
ctgttgaagagcagcatcgggaagaacggagggagcgactcgggcttccagggaagtgga
gctctgtccagcggaggctccgaaatccagaatgaggacgcctgcagcaactcctcccgc
gaccaggacagtccctccgactgcctctccccgggacctcatcatcctcctccgtcgtcg
tcctccttcgggaggccgcagccaacgtccaaccactcctcctcccagactctctccctg
tccaccttcgacttggaccgcctgtcggacgagcacctccgcgccaagcgagcccgggtg
gagaacatcatccgcggcatgagccactcgccgctggtccggaccagcgctggcgaccag
gacggcctccgcgaaagtgaaaacggacacagaggagacggtggcggccacaacgccaac
ccctcgtcccttctgagctcgccggggtcgcggggcggcgtggtgggtgtcgcggaggtg
taccgggagaataagaggaagcagcggctgccgcagcagcagcacagcttcacccagctg
gtgtgctccaggcaggagcagaggcaggaggagaggcggcagctcaaactccaacttgaa
gacatgcagaaacagttgcgccaacttcaggagaagttctaccagatctacgactcagag
acagaagaagaggaggaaaacggcgagggcagagagggtgagcgaggaggagaaagagag
gaggacgggaacttgtcagaggacagtatccggtccgacggtctggaggagaggcacagg
gaccgggggaggcacggccacgacgacctgtcggacctggacccgggtctgttcctggac
cgagcccgagctctcctgcgtgagcaggccctgatagacggcgacttggaggaggacaca
gacagtagaggagaagaggagaggagcggcgaccgggggatgaagaggcgggcagcggca
ggaggaggacgacagttggccgagactctcaagcaggagctgaactgtgccgtgtcgcag
gtcgttgacactgtcgtgaagggcttctcctcgccgaagcaggccgccgcccaccacgga
tgccacagcagcacgccggccgcgccctcttcctcctccaactcgtcttcttcctgcccg
ccgccgtttggcccgctgccccctctcacgcccgactcgcgtttcggaggcggcaccatg
gggctcaatctgaacggcgatggcagccccacccccaattaccactccaaccagcggctg
cactgcttcggggacgtcattgtaccgagtccgttagattcttttgggggtctcagcggc
agactgagtggcgtccccacccctaacgaccaaaccgaggccctgccgctggtggtgcgc
aagaatggtccggacaacaccagccacactctgcctcctccgccgccccctcaccacccc
tcccttcacccgtcccccctcacggcttcactcgggtttagcccgccatcatttcgacac
ccgttcccccttcctctgatgggttaccctttccagaaccccttggggtcgcatggctac
cccccagggcccaaagaccaccatcaatcctcccccgattccatggacataacccgggaa
gctgtcagcctaagaaccaaaatggcatctctgggagggggccacatgggtcaccatcac
cacagacagagctccccgaaccagcacgggtccgagagtttgtcgctgtccctgatcaag
tctgagtgcggggacctgcaagacatggccgacatctcgccctactcgggtagcaccatt
caggaaggcttgtctccaaaccatctgaagaaagccaagctgatgttcttctacactcgc
tatccttcctccaacatgctgaagatgtttttttctgatgtaaagttcaaccgttgcatc
acttcccagctgatcaagtggttcagcaactttcgggagttctactacatccagatggag
aagtttgctcggcaggccatcaacgacggggtgaccggcgccgaggagctgacggtgggc
cgggacgccgaactcttcagggccctcaacatgcactacaacaaagccaatgactttgag
gttcccgatcgatttctcgaggtagcccaggttactcttcgagagtttttcaacgccatc
gtagccgggaaggacgccgacccgtcctggaagaaggccatctacaaagtgatttgcaaa
ctggacagcgaggttcccgaggtcttcaagtcccccaactgtcttcaagagctcctacgt
gactga
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