Oryzias melastigma (Indian medaka): 112156744
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Entry
112156744 CDS
T07439
Symbol
agap1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112156744 (agap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112156744 (agap1)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112156744 (agap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank_5
Ank_4
Ank
Roc
PH_6
PH_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
112156744
NCBI-ProteinID:
XP_024144833
Ensembl:
ENSOMEG00000017185
LinkDB
All DBs
Position
LG2:complement(15683572..15824748)
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AA seq
1129 aa
AA seq
DB search
MYLLDSMERGSPQRRTVYRISLTLVKKESMDEDQPQQAGDATPGGFGREGSMEVQRGGQL
EELREVEDEAEEFSPSRGFLRSFRTFSTGQLELGKLKSCKKLLKARSPLAEQKKEMPGPG
PDGEGSGPAQNGSSSKRKRLLKAKSVEDKRSEPPVNGDGPACPGTPPLKPAPLHRSFSFR
HWSGSELLRALSRDKQHSSSGSIAPRPPDPAREKSRTLEVGAVLNRTESLTELSREAKNR
TLDNSDLLLLKDADGRGGFLRGGGGRSSERRLVRFFSGIFRREGAASPAGSPGTGRSLRR
SRRTPLTQSSSESMNGTDDAFVNSQEWTLSRTVPELKVGIVGNLASGKSALVHRYLTGTY
VQEESPEADVDAGGRFKKEIVVDGQSHLLLIRDEGGPPEAQFALWVDAVIFVFSLEDEIS
FQTVYHYYNRLANFRNTTELPLVLVGTQDAISSTNPRVIDDSRARKLSNELKRCTYYETC
ATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCTTQVSAVHVSQTSNG
GGSLSDYSSSVPSTPSTSQKELRIDVPPATNTPTPVRKQSKRRSNLFTSRKANEPDKEKK
GLEARADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHDYMQNV
HGKEINLLRTTVKVPGKRPPRAISTCAAVPSPNTNGLTKEMSGLQLGQTPGSVSSSASVS
QMPSGVSLVSFSSRGVEGMHQRSFSVSSADQWADATVIANSGVSTDTGLGDSVCSSPSIS
STSPKMEPPPSPHANRKKHRRKKSTSNFKADGLSGTAEEQEENFEFIIVSLTGQTWHFEA
TSYEERDAWVQVIESQILASLQSCESSKIKSRLSSQTEALALQSIRSIRGNGRCADCDTQ
NPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPLELIKVMSAIGNEVANSVWE
ANAQGRMKPGPDATREERERWIRAKYEQRLFLAPLPSTDLSLGQQLLRATAEEDQRSVVL
LLAHGSRQQVNETCGDGDGRNALHLASLKGNVILAQLLIWYGVDLMARDACGNSAMAYAR
QANCQECVDILAQYGCTDERHPLVATPNLSRRNTNRNNSCSSTGSTALI
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgctggacagcatggagaggggttctcctcagaggaggactgtctaccggatc
tccctgactttggtgaagaaggagagcatggatgaagaccagcctcagcaggcaggtgac
gccacacctgggggttttgggagggagggctccatggaggtccagaggggcgggcagctg
gaggagctgagggaggtggaggacgaggccgaggagttcagcccgtcccgcggctttctg
aggagcttcaggacgttcagcaccggacagctggagctggggaagctgaagagctgcaag
aagctgctgaaggcccggagcccgctggccgagcagaagaaggagatgcccggtcccggt
ccggacggcgaggggtcaggcccggctcagaacggcagctcgtccaagaggaagaggctg
ctgaaggcgaagagcgtggaggacaagcggtccgagcctcctgtgaacggagacgggccg
gcgtgtcccgggaccccccctctgaagccggcgcccctccaccgcagcttcagcttccgg
cactggagcggcagcgagctgctgcgggccctctccagggacaagcagcacagcagctcc
ggctccatcgccccgcgtccgcccgaccccgccagggagaagagcaggacgctggaggtg
ggcgccgtcctcaaccggaccgagtccctgacggagctgagccgggaggccaagaaccgc
acgctggacaacagcgacctgctgctgctgaaggacgccgacggcaggggcggcttcctg
agagggggcgggggccgctccagcgagaggcggctggtccgtttcttcagcgggatcttc
aggagggagggggcggcgtcgccagccggcagcccgggcacgggccggtccctgaggcgc
agcaggaggacgccgctgacccagtccagctctgagagcatgaacggcaccgacgacgcg
ttcgtcaacagtcaagagtggacgctgagccgaacggttcccgagctcaaagtgggcatt
gtgggaaacctggccagcgggaagtcggcgctggtgcaccggtacctgacgggaacgtac
gtgcaggaggagtcgcctgaagctgacgtggacgcaggcggcaggttcaagaaggagatc
gtggtggacggtcagagtcacctgctgctcatcagggatgaagggggacccccggaggct
cagttcgcgctgtgggtggacgccgtcatcttcgtcttcagcctggaggacgagatcagc
ttccagaccgtctaccactactacaaccggctggccaacttcaggaacaccaccgagctg
ccgctggtgctggtcggcacacaagacgccatcagctcgaccaacccgcgggtcatcgac
gacagccgggcccgaaagctctccaacgagctgaagcgctgcacctactacgaaacctgc
gccacctacggcctcaacgtggagcgagtcttccaggacgttgctcagaagatcgtggcc
accaggaagaagcagcagctgtccatcgggccgtgcaagtcgctccccaactcgccgagc
cactcctctgtgtgcacgactcaggtgtcagcagtgcacgtgagccagacgagtaacggc
ggcggcagtttaagcgactactcatcgtcggtgccgtccacgcccagcaccagccagaag
gagctgcgtatcgacgtcccgcccgccaccaacactcccacgccggtccggaagcagtcc
aaacgccgctccaacctcttcacgtcgaggaaggccaacgagccggacaaggaaaagaaa
ggcctggaagctcgagccgacagcatcggcagcgggcgagccatccccatcaaacagggc
atgctgctgaagagaagcggaaaatccctgaacaaggagtggaagaagaagtacgtgacg
ctgtgcgacaacggagttctcacctaccaccccagcctgcatgactacatgcagaacgtc
cacgggaaggagatcaacctgctcaggacgacggtgaaagtgccgggaaagaggccgccc
cgcgccatctccacctgcgccgccgtgccgagcccaaacaccaacggcctgaccaaggag
atgagcggtttacagctgggtcagaccccaggctcggtgtccagcagcgcgtcggtgtct
cagatgccgagcggcgtcagcctggtgtccttcagcagccgcggcgtggaggggatgcac
cagcgctccttctccgtgtccagcgccgaccagtgggccgacgccaccgtcatcgccaac
tcgggcgtcagcacagacactggccttggcgactccgtctgctccagtcccagcatctcc
agtacaagtcccaagatggagccaccaccgtcgccgcacgccaaccgtaagaagcaccgc
aggaagaagagcaccagcaacttcaaggccgacggcctctccggtaccgcagaagaacaa
gaggagaactttgagttcataatcgtgtcgctgacggggcagacgtggcactttgaggcc
acttcgtacgaggagcgcgacgcctgggtgcaggtcatcgagagccagatcctggccagc
ctgcagtcttgcgagagcagcaagatcaagtctcgtctgagcagccagacggaggcgctg
gcgctgcagtccatccggagtatcagaggaaacggtcgctgtgccgactgcgatacgcaa
aacccagactgggccagtctcaacctcggggctctgatttgcatcgagtgctcaggtatc
caccggaacctgggtacacatctgtcccgggtccgctctctcgatttggacgattggccg
ctggagctcatcaaagtgatgtctgctatcggcaacgaggtggctaacagtgtgtgggag
gctaacgctcagggacgcatgaagcctgggccagacgccaccagggaggagcgagagcgc
tggatccgagcgaagtacgagcagcggctcttcctggcgccactacccagcaccgacctc
tctcttggccagcagttgctacgggcaacggcggaggaggaccagcgctccgtcgtcctg
ctgctggcccacggctcccgacagcaggtcaacgaaacctgcggggacggcgacgggcgc
aacgcactacacttggcgagcctgaaaggcaacgtcatcctcgctcagctgctcatctgg
tacggcgtggacctgatggcgagggacgcctgtgggaacagcgccatggcgtacgcccgc
caggccaactgccaggagtgcgtggacattctggctcagtacggctgcacggacgagcgg
cacccgctcgtggccacgcccaacctgtcgcgccgcaacaccaaccgcaacaacagctgc
agcagcaccggcagcaccgcacttatatga
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integrated database retrieval system
