Oryzias melastigma (Indian medaka): 112156841
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Entry
112156841 CDS
T07439
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oml04054
]
112156841
Pattern recognition receptors [BR:
oml04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112156841
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
SPRY
LRR_6
AFG1_ATPase
LRR_4
AAA_16
Motif
Other DBs
NCBI-GeneID:
112156841
NCBI-ProteinID:
XP_024145001
LinkDB
All DBs
Position
LG2:14814800..14845913
Genome browser
AA seq
1064 aa
AA seq
DB search
MDQCEDTQEGAPPPESTLCGEDESQSKAQRNQPGPGVEPSCVSFRSDRSKGLDVDFKGNS
SGVEQVDQQSSETPSDPSVHQNQTQLDSIFLLLEDDIVTFVKKELKKIQRILIQREDEEL
EDEDEDQRSSRESLIKITENFLRRMKQEELADRLQNRSSFEVCQHKIQSGLKKKFQCVFE
GMAIAGNPTLLNEIYTELYITEGGTGELNEEHEVRQIEAASRKADRAETSIRQEELFQLP
AGRQEPIRTVMTKGVAGIGKTVLTQKFTLDWAEGKANQNIHFIFPFTFRELNVLKEEKFS
LVELVHHFFPETKEAGICSFEDFQIIFIFDGLDECRLPLDFHKTQILTEPRKSTSVGDLL
TNLIRGNLLPSARLWITTRPAAANQIPAECVDMVTEVRGFNDPQKEEYFWKRFRNKKEVR
RIISHIKRSRSLHIMCHIPVFCWITATVLEDLLKSREGGELPKSLTEMYIHFLVVQAKVK
KVKYDGGAETDPHWSPESRKMMESLGKLAFEQLQKGNLIFYESDLTECDIDIRAASVYSG
VFTQIFREERGLYQDKMFCFIHLSVQEFLAALHVHLTFITSGVNLMEEEQKESLIQFYQS
AVNKALQSPNGHLDLFLRFLLGLSLQTNQSLLQGLLTQTGSSSQTNQETVQYIKEKISEN
LSTEKSINLFHCLNELNDGSLVEEIQQFLSSGRLSTDELSPAQWSALVFILLSSEEDLEV
FDLQKYSASEEALLRLLPVIKASNKALLSGCKLSERSCVALSSVLSSQSSSLRDLDLSNN
NLLDSGVKLLSSGLESPHCELETLSLSGCLITEEGCASLASALKFNPSHLRELDLSYNHP
GEGGMKPLLAQLENPHWRLNTVKAEPAGVQWLTPGLRKYSCRLTIDTNTVNRNLKLSDNN
RKVTFETEPLSYPDHPDRFDMCHQLLCRDGLTGRCYWEVEWTDLVYISVSYRGVSRKGSG
NDCMFGWNNQSWSLICSHVRGYSVCHNNNEIYISSSLSSSSSPFSPSSTFRVAVYVDCPA
GTLSFFKVSSDSLIHIYTFNTTFTEPLYPGFGFRFLTCSSVALC
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacacacaggagggagcccctccccctgaaagcactctgtgtggg
gaagatgagagccagagcaaagctcagaggaaccaacctggacctggagttgaacccagc
tgtgtgtccttcaggagtgacaggtcaaagggtcttgatgttgacttcaaaggcaacagt
tcaggagtggaacaagtggaccagcagagctcagagactcccagtgatccatctgtccat
cagaatcaaacacagctggactccatatttctgctgctggaggacgacattgttactttt
gtgaagaaggagctgaagaagatccagagaattctgattcagagggaggatgaggaactg
gaggatgaagatgaagatcagaggagcagcagagagtcactaataaagatcacagagaac
ttcctgaggagaatgaagcaggaggagctggctgatcgactgcagaacagatcttctttt
gaagtttgtcaacataaaatccaatctggtctgaagaagaagttccagtgtgtatttgaa
ggaatggctatagcgggaaacccaacccttctgaatgagatctacacagagctctacatc
acagagggaggaactggagagctgaatgaagaacatgaggtcagacagattgaagcagca
tccaggaaagcagacagagcagaaacaagcatcagacaagaagagctctttcaactccca
gctggaagacaagaaccaatcagaaccgtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaaggcaaagccaaccagaacatc
cacttcatatttccattcactttcagagagctgaatgtgctgaaagaggagaagttcagc
ttggtggaacttgttcatcacttcttccctgaaaccaaagaagcaggaatctgcagcttt
gaagacttccagatcatcttcatctttgatggtctggatgagtgtcgacttcctctggac
ttccacaagactcagatcctaactgagcctagaaagtccacctcagtgggtgatctgctg
acaaacctcatcagggggaacctgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctgctgagtgtgttgacatggtgacagaggtcagggggttc
aatgacccacagaaggaggagtacttctggaagagattcagaaataaaaaggaggtcaga
aggatcatctcccatatcaagagatcccgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacagttctggaggatctgctgaagagcagagagggaggagag
ctgcccaagagcctgactgagatgtacatccacttcctggtggttcaggccaaagtcaag
aaggtcaagtatgatggaggagctgagacagatcctcactggagtccggagagcaggaag
atgatggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttc
tatgaatccgacctgacagagtgtgacattgatatcagagcagcctcagtgtactcagga
gtgttcacacagatctttagagaggagagaggcctgtaccaggacaagatgttctgcttc
atccatctgagtgttcaggagtttctggctgctcttcatgtccacctgaccttcatcacc
tctggagtcaacctcatggaggaagaacaaaaggagtccttgatccagttctaccagagt
gctgtgaacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctc
ctgggtctttcactgcagaccaatcagagtctactacaaggtctgctgacacagacagga
agtagctcacagaccaatcaggaaacagtccagtacatcaaggagaagatcagtgagaat
ctgtctacagagaaaagcatcaacctgttccactgtctgaatgaactgaatgatggttct
ctagtggaggagatccaacagttcctgagttcaggacgtctctccacagatgaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggaagtg
tttgacctgcagaaatactctgcttcagaggaggctcttctgaggctgctgccagtgatc
aaagcctccaacaaagctctactgagtggttgtaagctttcagagagaagctgtgtagct
ctgtcttcagttctcagctctcagtcatccagtctcagagatctggacctgagtaacaac
aacctgctggattcaggtgtgaaactgctttcttctggactagagagcccacactgtgaa
ctggaaactctcagcctgtcaggttgtctgatcacagaagaaggatgtgcttctctggct
tcagctctgaagttcaacccctcccatctgagagagctggacctgagctacaatcatcca
ggagagggtggaatgaagccactgttggcacagctggaaaatccacactggagactgaac
actgtcaaggcggagcctgctggagtccaatggttgaccccaggtctgaggaagtattcc
tgtcgcctcacaatcgacacaaacacagtgaacagaaacctcaaactgtctgacaacaac
aggaaggtgacctttgagacggaacctctgtcatatcctgatcatccagacagattcgac
atgtgtcatcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgag
tggacagatttggtttatatatctgtgagttacagaggagtcagtagaaaaggaagcggt
aatgactgtatgtttggatggaacaatcagtcctggagtctgatctgctctcatgttcgt
ggctactctgtgtgccacaataacaatgaaatatacatctcttcctccctctcttcttcc
tcctcccccttttccccctcttccacttttagagtagcagtgtatgtggactgtcctgct
ggtactctgtccttcttcaaagtgtcctctgactcactgatccacatctacacctttaac
accacattcactgaacctctttaccctggatttgggttcagattcttgacttgctcctca
gtggctctgtgttga
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