Oryzias melastigma (Indian medaka): 112157020
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Entry
112157020 CDS
T07439
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112157020
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
112157020
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112157020
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112157020
NCBI-ProteinID:
XP_024145218
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Position
LG1:27575313..27595980
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AA seq
389 aa
AA seq
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MQTMAVCPMGGGATRLYSTLTQSLGSNSSPRPYLDPHHLDVTNLDPDFHQQQNGSSVRPP
DPEELLRQCEEALRDRPPRLHRQFVHLNNDNGAPNSPVRVMQWNILAQALGEGVDNFVRC
PLDALCWSQRKCLLLEEILTYRPHILCLQEVDHYYDTFEPVLAGLGYSGHFCPKPYSPCL
DVEGNNGPDGCALFYDRSRFELLDSTSTRLYAIMIPTNQVAVVTTLRCRITGNFVCVAVT
HLKARSGWEWLRSAQGSDLLWQLQNLTNKLSAGLGDDNIPLLICGDFNAVPTEDVYRHFA
VSPLGLDSAYKKLSQDGSTEPKYTSWKIRATGECCSTLDYIWYTKDTLRVNAVLDMPTEE
QIGPDRLPSYSYPSDHLSLVCDFTFREKE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagactatggcagtgtgtccgatgggtggaggggccaccaggctgtacagcaccctg
actcagagcctgggcagcaacagctccccccgcccttacctggacccccaccatttggac
gtcacaaacctggatccagatttccatcagcagcagaacggctcctccgtccgtcctccc
gatccagaggagctgctgcgtcagtgcgaggaggcgctcagggaccggccccctcgcctc
cacaggcagttcgttcacctcaataatgacaacggcgcccccaacagccccgtcagggtg
atgcagtggaacatcctggcacaagctctgggagaaggcgtggataacttcgtccggtgt
cccctggacgccctctgctggtcccagagaaaatgtctcctcctggaggagatcctcacc
taccgacctcacatcctgtgtctgcaggaagtcgaccactactacgacacctttgaaccc
gtcctggcaggtttggggtacagcggtcacttctgccccaagccctactccccgtgtctg
gatgtggagggcaacaacggccccgacggctgcgcgctcttttatgaccgctccagattt
gagctgctggacagcacgagcacgcggctctacgccatcatgatccccactaaccaggtt
gctgtagtgaccactctgcgttgccgcatcacgggaaacttcgtgtgtgtcgccgtgacg
cacctgaaggctcgttccgggtgggagtggcttcgcagcgctcaaggatccgacctcctt
tggcagctccagaatctgaccaacaagctctccgccgggctcggcgacgacaacatacct
ctgctcatctgcggagacttcaacgccgtcccaacggaggacgtctaccgccacttcgcc
gtttctcctctcggtttggactccgcctacaaaaaactcagccaagacggctcaacagaa
ccaaagtacacatcctggaagatccgggccacgggggaatgctgctccactctggactac
atctggtacacaaaagacaccctgagagtgaacgcggttctggacatgcccaccgaggag
cagatcggaccggaccggcttccatcctacagctacccatccgaccacctctctctggtt
tgtgactttacatttagggagaaggaatga
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