Oryzias melastigma (Indian medaka): 112157023
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Entry
112157023 CDS
T07439
Name
(RefSeq) caspase-6-like isoform X1
KO
K04396
caspase 6 [EC:
3.4.22.59
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112157023
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112157023
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.59 caspase-6
112157023
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C14: caspase family
112157023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
112157023
NCBI-ProteinID:
XP_036068295
Ensembl:
ENSOMEG00000005821
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All DBs
Position
LG1:16808453..16819966
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AA seq
320 aa
AA seq
DB search
MATCRGSVENDSRPITKDAENPCETDSSNEFDLNPLEEYKMNHKRRGLALIFNQENFFFR
LKLSKRTGTNADCDNLEKRYLSPTLLLSVLMNMSVFLKVTFYFATTHFCLSYRLEELNFE
VKTYDDEGQKEVLNAIHEAAEEDHSDADCFLLVFLSHGKDNCVYTNDGMINIQDIIHAFR
GDNCPSLVGKPKIFIFQACRGDKPDTPVVASGATDHQEVINKVVIDASALNTLPAAADFI
MCFSVAEGFFSLRDTNNGSWYIQDLCELLEKYGHQLEFTEILTLVNRKVSMRSVRMRKHP
KAVKQVPCFASMLTKKLYFR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctacctgcagaggaagtgttgaaaacgacagcagaccaattactaaagatgcggag
aacccgtgtgagactgactcttccaacgaatttgatttgaacccacttgaggagtacaag
atgaaccacaaacggcgaggtctggctctcattttcaaccaggagaattttttctttcgg
ctgaagttgagtaaaaggactggaacaaatgctgactgcgacaacttggagaaacggtat
ctctctcccactctactgctgagtgtcttgatgaatatgtctgtttttttaaaagtaact
ttttattttgcaacaacccacttttgtttatcatatagactcgaggagttaaattttgaa
gtcaaaacttatgatgatgaaggccagaaggaggtcctgaatgcaatccatgaagctgct
gaggaggatcactctgatgccgactgctttctactggtcttcctgagccacggcaaggac
aactgcgtttacaccaacgatggcatgatcaacatccaggacatcatacatgcattcaga
ggagacaactgcccaagcctcgtaggaaagccgaagatcttcatttttcaggcgtgtcgt
ggagacaaacctgatactccagtggttgcatctggggctactgaccatcaggaggtgatt
aataaggtggtgattgatgccagtgcactaaacactcttcctgcagcagctgatttcatc
atgtgcttttctgtggctgaaggtttcttttccctccgagataccaacaatggctcctgg
tacatccaggatttgtgcgagctacttgagaagtacggacatcagcttgagttcaccgag
atactcaccctggtcaacagaaaagtgtcaatgagaagtgtgaggatgcgtaagcaccca
aaggctgttaaacaggttccttgttttgcttccatgttaaccaagaagctctacttccgg
taa
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