Oryzias melastigma (Indian medaka): 112157024
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Entry
112157024 CDS
T07439
Name
(RefSeq) LOW QUALITY PROTEIN: caspase-6
KO
K04396
caspase 6 [EC:
3.4.22.59
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112157024
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112157024
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.59 caspase-6
112157024
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C14: caspase family
112157024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
DUF2812
Motif
Other DBs
NCBI-GeneID:
112157024
NCBI-ProteinID:
XP_036068320
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Position
LG1:16821898..16825076
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AA seq
291 aa
AA seq
DB search
MATCGGSVETDSQTETNQMENQCEIDSFNKLCITDLNPAEEYKMNHKRRGLALIFNHENF
YYWRNLNDRNTCXDRNSLKRRLQELNFEVRNYDNAKQTDVLDRIHEAAGEDHADADCFLL
VFLSHGKDNCVYTHDGMVNIQEITAAFRGDNCPSLVGKPKIFIFQACRGEKHDTAVVATD
AVDHREETMEEVVVDASALNTLPAAADFIMCYSVAEGFFSHRHIKEGSWYIQDLCELLEK
FGNSLEFTELLTLVNRKVAMRGVKMLRDSDEKKQVPCFASMLTKKLYFRKK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctacctgtggaggaagtgttgaaacagacagccaaacagaaactaatcagatggag
aaccagtgtgagatcgactcgtttaacaaattatgcataaccgatttgaacccagctgaa
gaatacaagatgaaccacaaacggcgaggcctggccctcattttcaaccatgagaatttt
tactattggcggaatttgaatgataggaacacatgtnntgaccgcaacagcttaaagaga
cgactccaggagttaaattttgaagtccggaattatgacaatgcaaagcagacagatgtc
ctggatagaatccatgaagctgctggggaggatcacgctgatgccgactgctttctgctg
gtctttctgagccacggcaaggacaactgcgtttacacccacgatggcatggtcaacatc
caagagatcacagccgcattcagaggagacaactgcccgagccttgtaggaaagccgaag
atcttcatttttcaggcgtgtcgtggagaaaaacatgatacagcagtggtcgccaccgat
gctgttgaccacagggaggagactatggaggaggtggtggttgatgccagtgcactaaat
actctacctgctgcagctgatttcatcatgtgctattctgtggctgaaggtttcttttcc
caccgacatataaaagagggctcctggtacatccaggatttgtgcgagctccttgaaaag
tttggaaattcccttgagttcactgagttactcaccttggtgaacagaaaagtggcaatg
agaggtgtgaagatgctcagggactctgacgagaaaaaacaggttccatgttttgcttcc
atgttaaccaagaagctctacttccggaaaaagtaa
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