Oryzias melastigma (Indian medaka): 112157039
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Entry
112157039 CDS
T07439
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-D isoform X1
KO
K05718
integrin alpha L
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112157039 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112157039 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112157039 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
oml04515
]
112157039 (zmp:0000001082)
04090 CD molecules [BR:
oml04090
]
112157039 (zmp:0000001082)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112157039 (zmp:0000001082)
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin alpha subunits
112157039 (zmp:0000001082)
CD molecules [BR:
oml04090
]
Proteins
112157039 (zmp:0000001082)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
ITGAX-like_Ig_3
FG-GAP_3
vWA_SIBA-E
FG-GAP_2
Integrin_A_Ig_3
YEATS
Cathelicidins
Motif
Other DBs
NCBI-GeneID:
112157039
NCBI-ProteinID:
XP_024145253
LinkDB
All DBs
Position
LG1:complement(28980171..29001847)
Genome browser
AA seq
1222 aa
AA seq
DB search
MRGICLICCIWAAAAVIPSSLAFNIGTTDVKVLSGEKKDFFGYKVFQFTSADKTGIIVTA
PLSLNGSGEICKYRHEEKPRCQTSQDFPDANSTKIKHLGMSIAAKPTGSEFTVCSPNVVH
ECLGNSYLNSWCLSMKDNVSRSFKPGFQECTKNKVDLVFLFDGSGSMTEEEFKKNKDFIK
SIMDSLSNTTIKFAAVQFSRRPRIVFDFNDHVAGRALEKLIKEEHMKSLTNTYRALQFIL
DNLFGKESAGATPGATQVLVLITDGDPSDTQKDGVLTKYDQKNIIRFVIGVKIDSMEKIK
PIASEPKDKNVFKIEDYKGLDGILKNFQNKIFVVEGSKVALAGNLTNEMSQTGFSAAYYK
DTLVLGSVGSNSWRGSLEQRENEDEEQHEDQILDPDMEMDSYMGFSLSTGERNGVPLYFS
GAPRFQHTGQVVIFSSTGKHWTVQQRLEGTKVGSYFGAEICTVDIDSDDSTDFLLVGAPM
FYQPLQKTEGKVYVYALTNKKQLEMRLSLTAPSMGRFGTTISSLADMNGDGLRDVAVGAP
LEDDNHGAVYIYLGDRNSGIRHTFSQRINGKSFQPEMRFFGLAVDGHGDLGNDGLPDVVV
GSQGAAVVLRSKPVYNVAANLSFHPEVISIENIDCVNNPHEVLPMVNLTTCFQLQETTKS
KTEKANLTLGILYTLSVDLMRQTHRGFFSPTDKKTKSLHIHYNLTTQATCFNHSVFMPKC
VKDTLSPISIKFNFSQPDNENAIAVLNTDCKKEAIFEIPFEKKCRKNDTCVAELEVDFDF
TTPTLLVSEQSYFNISILLANKGDDSYNTSLTVLHSPGLSFSNVNVTKATRQTLYECYDL
KEVRDRTQCGISRPVYRSGSMATFHSSFHVIKDIDWNDTMTMTVFGQSDNTNSSRIGSVT
KTIKVQYEIRMVTAVKEDSVTYLNFTTGDNKPQKMVITYQIDNTGFKDFPVNVSLYFPKQ
VQENFELINYQVFVQKNKTQCSSTLDKKSEDCTQEKECIVTQCNSFSLKKHSSAAFTLQA
DVHFRDIHRYVKEFSPFTGGRTEIRFKSLIRVDTDRSRYVLASYNEKSSNIKLLKNGQVT
ENDQTTKWVQKHPNGHREYREQLFTTCILCPKQSEVRVEIIVPPNQWVIIGTGAGAGLLL
LIIITIILYKLGCFKRKKMPVDEEEVTFSCPVEQATNGLTDETVGKSDDGDKSDQVLEEQ
QSLQKSNGDLQSEDEPKDQDSA
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcatctgcctgatctgctgcatttgggctgcagctgcagtcatcccgagttct
ttggctttcaacattggaacaacggatgtcaaagtcttatctggagaaaagaaagatttc
tttggatataaagtgtttcagttcacatcagctgacaagacggggatcattgtcacagca
cctttgagcttaaatggatctggggaaatatgcaagtacagacatgaagaaaagccacgt
tgccagacttctcaggattttccggacgcaaactcaacaaaaatcaagcatttgggtatg
tcaatagctgcaaaaccaactggatccgagttcacggtgtgcagtccaaacgttgtccat
gaatgcttagggaactcctacctcaacagttggtgtctcagcatgaaagataatgtttca
cgctcttttaaaccaggcttccaagagtgcaccaaaaacaaagtagacctggtctttctg
tttgatggatcaggcagcatgactgaagaagaatttaaaaaaaacaaagatttcattaag
agcatcatggacagtttatccaacacaacaatcaagtttgcagcggttcagttctcccgc
agacccagaatagtttttgacttcaatgaccacgttgcaggaagagctttggagaaactg
atcaaagaagagcatatgaagtcactcacaaacacatatagagcccttcagtttatctta
gacaacctgtttggaaaagagtcagcgggcgccactcctggtgcaactcaagttctggtt
ctcataacggacggagatcccagtgatactcaaaaggacggagttcttacaaaatatgac
caaaagaacatcattcggtttgtcatcggggttaaaattgatagcatggaaaaaattaaa
cccatcgcctcagagccgaaggacaaaaatgtttttaaaattgaggactataaagggctt
gatgggattttaaaaaacttccaaaataagatcttcgttgtggaagggtccaaagtggct
ctggcaggaaacttaactaatgaaatgtctcagactggattcagtgctgcctattacaag
gacactctggttctgggctcggtgggatcaaacagctggcgtggttctctggagcagcgt
gaaaatgaagatgaagaacaacatgaagatcagattttggatccagacatggagatggat
tcctacatgggattttccttatccaccggggagaggaatggagttcctctatatttctcg
ggcgctccccggtttcaacacactggacaagttgtaattttctctagtactggaaaacac
tggactgtacagcagagactagaggggaccaaggtcggttcctattttggcgcggagatc
tgcactgtcgatattgattcagatgatagcactgacttcctgttggtgggagctccaatg
ttttaccagcctctacaaaagacagaaggcaaagtctatgtctacgcactgaccaataag
aagcaactggaaatgaggctgagcctgacggctccatctatggggagatttggcaccacc
atatccagccttgctgatatgaatggagatggactccgagatgtagcagtcggcgcccct
ctggaggacgataaccatggagctgtgtacatttatctcggagacagaaatagtgggata
cgccacaccttcagccagagaatcaatggaaagagttttcaacctgaaatgaggtttttt
ggtctagctgttgatggacatggagatcttggaaatgatgggcttccagatgttgtggtt
ggatcacagggcgctgctgttgttttaaggtccaagccagtctataatgttgcagctaac
ttgtcgttccatcctgaagtaataagtatcgaaaacatcgactgcgtaaacaatccccat
gaagttctgcccatggttaacctaacaacatgttttcagttgcaagagacaacaaagagc
aaaacagaaaaagctaatctcacactgggaatcctgtacacgctcagtgtggatttaatg
agacaaacccatcgaggattcttcagtccaactgataagaaaaccaagagtcttcacatc
cactataacctcaccacacaagcgacgtgtttcaatcattcagtcttcatgccgaaatgt
gtgaaggacacgttatcccccatcagcattaagtttaacttttcccaacctgacaatgag
aacgcaattgccgtcctaaacacggactgtaagaaggaggccatttttgagattccattc
gagaaaaaatgcagaaagaacgacacctgcgttgctgaactggaagtagatttcgacttc
acgacgccaacgctgttggtgtctgagcagagttacttcaacatttccatattactggca
aataaaggtgacgactcgtacaacaccagcctgactgtgctccactctcccggcctttcc
ttttccaatgtgaatgtcacaaaggccacaagacaaactctgtatgagtgctatgatctg
aaagaagtacgagacagaactcagtgtggcatcagccgtcccgtgtaccgaagtggctcc
atggcaacattccactcctctttccatgtcattaaggatattgattggaatgacacaatg
actatgaccgtatttggacaaagtgacaacacaaactccagcaggattggttctgtgacc
aaaaccataaaggtacaatatgaaatcaggatggtaactgcagtgaaagaggacagtgtc
acctatctgaactttacaacaggggataacaaaccccaaaaaatggtcatcacttaccag
atagataatactggtttcaaggattttccggtcaatgtgtcgctatatttcccaaaacaa
gttcaagaaaactttgaattaatcaactatcaagttttcgttcaaaagaacaaaacccag
tgctctagcactcttgataaaaaatctgaggactgcacacaggaaaaggaatgcatcgtc
acacagtgcaacagtttcagtctgaaaaaacactcttctgctgccttcacgctacaggca
gatgtgcattttagagacattcatcgttatgtcaaggaattttctccctttactggagga
agaacagagatcagattcaagagtttgatacgcgtcgataccgacagaagccgatatgtg
ctagcttcctacaatgagaaaagctcgaacatcaaacttttgaagaatggtcaagtcact
gaaaatgatcaaacgacgaaatgggtacaaaaacatccaaacggacacagagaatacaga
gaacaattgttcacaacttgcattttatgtcccaaacagagcgaagttagagttgagatc
atcgttccccccaaccagtgggtgatcattggaactggagctggagcaggattgctgctt
ctcatcataataacgataatcttgtataaactgggctgcttcaagaggaaaaaaatgcca
gtggacgaggaagaagtaaccttttcttgccccgtggaacaagccaccaatggcctgact
gatgaaacagttggtaaatcagacgatggagacaaatctgatcaagttctcgaggaacaa
cagtctcttcagaagagcaacggagaccttcaatcagaagacgagccgaaggaccaggat
tcagcttaa
DBGET
integrated database retrieval system
