KEGG   Oryzias melastigma (Indian medaka): 112157058
Entry
112157058         CDS       T07439                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112157058 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112157058 (polr1e)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     112157058 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49 Rax2
Other DBs
NCBI-GeneID: 112157058
NCBI-ProteinID: XP_024145289
Ensembl: ENSOMEG00000013264
UniProt: A0A3B3C269
LinkDB
Position
LG1:20615426..20619947
AA seq 424 aa
MSRITTTIMAASCKVVCCEEERESDKAILVRFSNGFTDNAQRLDFATFKNTDENNPRKKI
RRIVVAESERLSYVGQNFGEDLMKCNNLCRYYVGVLNKETMQMEMHSAQLFNMQPVIPGE
GTQDAMSQDATVSYREKVDSLIEAFGTNKQKRALSSRRLNQVGSDALHHAVAEAASSVID
NKGLEALQQEVAETESQGSLSLHLPPCNPDADKQENVYPFEELLSSVEFAALEASGQKMA
ALSQEELQKLKNQRGNLCVVKHLENMPSADDSREKTARCAFYLSLLIKLSHQKIVTRKFW
TEEGCPRVIQNKMLRTFTVETYNNARVQSTVSTSMRTKIAAHSLALLLHLGDMTVDLSLL
HRDLEITEPRMLEIAKSMGLTLSKPARGKGDDTELQDEHRYASLILPLIKHDKFVERRKR
KKMH
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgagcaggatcacaacaacaatcatggctgcctcgtgcaaggtggtgtgctgcgaggag
gaaagagagtctgacaaggctatcttagttcgattttcgaatggtttcaccgacaatgcg
cagagactggattttgccacattcaagaacacagatgaaaataatccgaggaaaaagata
agacggatagtggttgctgaatcagaacggttgtcctacgttggacagaattttggagaa
gatttaatgaaatgcaataatctgtgcagatattatgttggagtgttaaataaagagacc
atgcagatggagatgcacagtgctcagctgttcaacatgcagcctgtcataccaggagag
ggaactcaggatgcaatgtctcaggacgccactgtgtcctacagggaaaaggttgactct
ttgattgaggcgtttggcaccaataaacagaagcgagctctgagctctcgcaggctcaac
caggtgggcagtgatgctctgcatcatgcagtggctgaagctgccagctctgtgatcgat
aacaagggtctggaagctctacaacaggaagtagcagaaacagagtctcaaggatccctg
tccttacaccttcctccctgcaatccagatgcagacaaacaagaaaacgtctaccccttt
gaggagctcctgagttcagtagaatttgccgctttggaggcgagtggtcaaaagatggcg
gcactaagccaagaggagctgcaaaagttgaaaaaccaaagagggaacctgtgtgtggtg
aagcacctggagaacatgccgtctgcagatgattctagagagaaaacggctcgctgtgcc
ttctacctgtctctgctcatcaaactttcacatcagaagattgtcactcgcaaattttgg
acggaggaaggttgtcctcgtgtcattcagaataaaatgctcagaacgttcactgtggag
acgtacaataatgccagggtccagagcactgtgtcgacatcaatgcgtaccaaaatagca
gctcacagtctggctttgttgctgcatttgggggacatgactgttgacctgtcgctgctt
caccgggatctggaaatcactgagcctaggatgctagagatcgcaaagtcaatggggtta
accttgagcaagccggcccgcggtaaaggagatgacaccgaactacaggacgaacacaga
tacgcatcacttatcctgcctctaatcaaacacgacaagtttgtcgagagacggaagcgc
aagaaaatgcactaa

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