Oryzias melastigma (Indian medaka): 112157101
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Entry
112157101 CDS
T07439
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2 isoform X2
KO
K13339
peroxin-6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112157101 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112157101 (pex6)
Membrane trafficking [BR:
oml04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112157101 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
DUF815
AAA_33
AAA_22
RuvB_N
AAA_5
AAA_19
nSTAND3
Vps4_C
TsaE
TIP49
AAA_7
NPHP3_N
RNA_helicase
PEX6_4th
Parvo_NS1
Mg_chelatase
AAA_28
AAA_18
AAA_25
IstB_IS21
AAA_24
AAA_14
AAA_17
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
112157101
NCBI-ProteinID:
XP_024145407
Ensembl:
ENSOMEG00000000896
UniProt:
A0A3B3CGK5
LinkDB
All DBs
Position
LG1:complement(24307119..24316081)
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AA seq
1048 aa
AA seq
DB search
MALEVQLCSLEEFPSHLSPLEVLLLQTHLDSVFQNASDSPTVLFAAQQPQLSGRTGILLR
VHGTTEEEVSGCGGASLPAGSGETTLRLFTSRFFLRHHRLKGTGFIRPMEPVSLDRVVIG
ARSKQSLCWAGAKQFSAGLTELCRGEEWLLARQGDPLLLPLHPLLGEDPEQVRQLLMELQ
VLDCSPVTQGRITANTALVLTDFWDPADPPAPPGPCRPLGLCVSDFARYADSLGGGGSLL
DSWRASSGLSDAVRVLEFRLDVRVVDTRRWWGADLDGCVFLSKHVLLRLGLFNHEWVKLG
RPGGASAEDGETVACRERLASAVVVDLSLCPELQPHADGAFISATLWFNMTEGEELPVNG
FTLTMKRWSPSPAEPDLHRSDSSCRRASPPVAVELHIQPVVSPAYKKPSCCDELLAEHFS
TPRVVSEGDILTVPTENHPELLENGSEGIYRSPALFFRVQKVKPPSNEGQGGGGGGGGGA
YLADRTHTSLFMGASTNSAVPCLSADASSLWSSLSPPGLHRTVELLSSIILPHLQHRESL
PRCTVLLHGSAGSGKMTVVRAASCRLHLHLLKVDCVTMCADTPAASEAKLASAFQRAEAL
QPCVLLLRNLQLLVRPRGAEEDGRVQAALCHLLNSAPTRVAVVATVCRARDLSAGVMAAF
VHRVELESLTEEQRHAILISLSRHLHLGRDVSLERLSKLTAGFVLGDLNALIVEAGRAAC
RRMMQNCGSREQEDLCSSGVTVQNLDFTSALEVLQDAQSKAVGAPKIPNVRWEDIGGLQH
VKREILDTVQLPLQHPELLSLGLNRTGVLLYGPPGTGKTLLAKAVATECSMTFLSVKGPE
LINMYVGQSEENIREVFHRARSAAPCVVFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAE
LDGLNSSAGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRVSQLQVLQAILRRFQL
DPAVNLQEVVDRCPALMTGADLYALCSDAMTAAIKRKILLIEGGLDSEESPVLLSAEDFS
SALETFKPSVSEQELHRYQNIQKKLTAT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaagttcagctgtgtagtttggaggagttcccctcacacctgagtcctctg
gaggttttgctccttcaaactcacttggattcagtttttcagaatgcctcagactctccg
acggtcctcttcgcggcgcagcagcctcagctcagcgggcgaacgggcattctcctgcgc
gttcacggcaccaccgaggaggaggtgtcgggctgtggtggagcgagccttccagcgggc
agcggagaaacgaccctccggctgttcaccagccgcttcttcctgcggcaccaccgactc
aaaggaaccggctttattcgacccatggagcccgttagcctggaccgagtggtgataggc
gcccgcagcaagcagagcctatgctgggctggagccaagcagttctccgccgggctgacg
gagctctgccgcggggaagagtggctgcttgcacggcagggagacccgctgctgctccct
ctacacccgctgctcggagaagacccggagcaggtgcgtcagctgctgatggagctgcag
gtgttggactgcagtcccgtcactcaggggaggatcacagccaacaccgctctggtcctg
acagatttctgggacccagcggaccccccggcgccccccggcccctgcagacccctcggc
ctgtgcgtgtcagactttgcccgttacgcagacagcctgggaggaggcggttctctcctg
gacagctggagggcgagctcgggcttatcggacgccgtgcgggtgctggagttccggctg
gacgttcgggtggtggacactcggcggtggtggggggctgatctggacggctgtgttttc
ctgagcaagcatgtgctgctgcgactcggtttgtttaaccacgagtgggtgaagctgggg
aggccgggcggagcctccgcggaggatggagaaacggtcgcctgcagagagcggctggcg
tctgcggtggtggtggatctgtcgctctgcccggagctgcagcctcacgcagatggagcc
ttcatctctgcaactctgtggttcaacatgacggagggagaggagcttcctgtgaacggc
ttcacgctaacgatgaagaggtggagtccgtcgcctgcagaacccgaccttcatcgctca
gacagctcctgccgccgagcttctccacccgttgcggttgagcttcacattcagcccgtc
gtctctccggcgtacaaaaagccgagctgctgtgacgagctgctggccgaacacttcagc
actcccagagtggtttcagagggagacatcctgacggttcctaccgaaaaccatccggag
ctgctggaaaacggctcggaggggatctacaggagtccggcgcttttcttcagagtgcag
aaagtgaagcctccttcaaacgaaggacaaggaggaggaggaggaggaggaggaggcgca
tacctggcagacagaacgcacacctccctctttatgggggcgtccaccaacagcgcggtg
ccgtgtctctctgcagacgcttcctctctttggagcagcttatctccaccgggactccac
agaaccgtggagctgctcagcagcatcatcctgcctcatctgcagcacagggagtcttta
ccccggtgcaccgtcctgctccacggctctgcaggcagcgggaagatgacggtggtccga
gcggcgagctgcaggctccacctacacctgctgaaggtggattgtgtgacgatgtgcgcc
gacactccggctgcctcggaggccaagctggcgtcggcgtttcagcgggctgaggccctg
cagccgtgtgtcctgctgctcaggaacctgcagctgctggttcgaccgcgtggagccgag
gaggacggcagggtccaggccgcgctgtgccatctgctcaacagcgcccccaccagggtg
gctgtggtggcgacggtctgcagagctcgagatctctctgctggtgtcatggctgcgttt
gtgcaccgggtggagctggagagtctcacagaggagcagcggcacgccattctgatcagc
ctgagccgacatctccacctggggagagacgtgagcctggagaggctctccaaactcacc
gctggtttcgttttgggggacctgaacgcgctcatagtggaggctggcagagcggcctgc
aggagaatgatgcagaactgtggctcccgggagcaggaagatctgtgctccagtggagtg
accgtccagaacctggacttcacctctgctctggaggtgctgcaggatgctcagtctaaa
gccgtcggagccccaaagatcccgaacgtgcgctgggaggatatcggaggcctgcagcac
gtgaagagggagatcttggacacggttcagcttccgctgcagcatccggagcttctgtct
ttgggcctgaaccggaccggggtcctgctgtacggaccgcccgggacagggaagaccctg
ctggccaaagctgtggccacagagtgctccatgaccttcctcagtgtcaaagggccagag
ctcatcaacatgtatgtgggtcagagtgaggaaaacatcagagaagtgttccacagagca
cgctcagcagctccatgcgtcgtcttctttgatgaactggactctctggctcccagcagg
gggcgcagtggagactcaggaggggtgatggacagagtcgtgtcgcagctgctggccgag
ctcgacggcctgaactcgtccgctggagtctttgtgatcggagccacaaaccgaccggac
cttctggaccagtctctgctcaggcccggcaggtttgacaagctggtttatgtaggaatc
aatgaggatcgtgtctcccagctgcaggttcttcaggccatcctcagaaggttccagttg
gatccggctgtgaacctccaggaagtggtggatcgatgcccggctctaatgaccggtgcc
gatctttatgctctctgttcagacgccatgactgccgccatcaaaaggaaaattttgctc
atcgagggcggtctggactctgaggagtctcccgtgctcctctccgccgaggatttctcc
tcagcgctggaaaccttcaagccgtctgtttctgagcaggagctgcatcgataccagaac
atccagaagaaactgacagcaacgtag
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