Oryzias melastigma (Indian medaka): 112157119
Help
Entry
112157119 CDS
T07439
Symbol
rbm47
Name
(RefSeq) RNA-binding protein 47 isoform X1
KO
K25083
RNA-binding protein 47
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112157119 (rbm47)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
RRM domain-containing proteins
112157119 (rbm47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RBD_RDR6
RRM_5
RRM_occluded
RRM_fung
ERp29
xRRM
Motif
Other DBs
NCBI-GeneID:
112157119
NCBI-ProteinID:
XP_024145438
Ensembl:
ENSOMEG00000010730
LinkDB
All DBs
Position
LG1:complement(19715738..19750414)
Genome browser
AA seq
611 aa
AA seq
DB search
MTAEDPAASSTMSNNAAHAKPSAASHHSLHGHMNIPEGVAGASNEAALVALMERTGYSMV
QENGQRKYGPPPGWNSPSPPRGCEIFVGKIPRDVYEDELVPVFESVGRIYEMRLMMDFDG
KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEIL
EEVSKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAV
DWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHF
TSRDDAVQAMDNLNGTEIEGSCIEVTLAKPVDKEQYSRQKASKGAVPATPETTQQNYVYQ
CDPYTLAYYGYPYSTLIGPNRDYFVKGTPMIQNNAGTVRGRGRAAAGNRTPGPRGSYLGG
YSAGRGIYSRYHEGKTKQPEKPYELVNSLELAASVNPVGIKPGTMALPALGAQYPVFSAT
PAPKLIEDGKVHTVEHLINPLTIQHPEHTTATAAATVLPAVSTPPPFQGRPITPVYAMAH
NVQRIPTAAGLYGPGYVPITNYTANTAALAALQKNAAMTAAAYGSYAGYAVPQPFPAAAF
QLPIHDVYQTY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagatcctgctgcttcttcaacaatgagcaataacgctgcccacgctaaa
ccctccgctgcctcccaccattctctccatggacacatgaacatcccagagggggttgca
ggagcctccaatgaagctgcactggtggccttgatggagcgcactggctacagtatggta
caggaaaatggtcaacgcaaatatggcccccctccaggctggaacagcccatctcctcct
cgaggatgtgaaatctttgttgggaaaatcccaagagacgtttatgaggacgagttagtc
ccagtgtttgagtcagtaggccgcatctacgaaatgcgtctcatgatggacttcgatggc
aaaaaccgagggtatgcatttgtgatgtacacagagaaacatgaggccaaaagagctgtg
cgggagctaaataactatgaggtgcggcctggtcgtctgctgggggtctgttcttctgtg
gataactgccgtcttttcattggtggcattcccaagacaaagaagcgtgaagagatcctg
gaggaagtctccaaagtgacagaaggggtattagatgtgatagtttatgccagtgctgca
gacaagatgaagaaccgaggctttgcctttgtagagtacgagtcgcatcgtgcagctgct
atggctcgcaggaagttgatgcctggccgtattcagctgtggggccaccagatcgctgtg
gactgggctgaaccagaaattgatgtagatgaagatgtgatggagaccgtcaagatcctc
tatgttagaaatctaatgatggagacaaatgaagagacaatcagacagatcttcagccag
tggaaccctggatgtgttgagcgcgtaaaaaagatccgtgactatgcttttgtccacttc
acatcacgggacgatgctgtgcaggcaatggacaacctgaatggcacagagatcgagggg
tcctgcatcgaggtgacgctcgccaaaccggtagataaagagcagtactcccgccagaag
gcgtccaagggggcggttcctgccactccagaaaccacgcagcagaactacgtttaccag
tgtgacccctacacattggcctactatggttatccctacagcaccctcattggacccaac
agggactactttgtgaaaggaaccccaatgatacagaacaatgcaggtactgtgagaggt
cgtggccgtgccgctgcaggtaatcgtacccctggaccgcgagggtcataccttgggggt
tactctgccggtcgtggcatctacagccgctatcacgagggcaagaccaagcagcccgaa
aagccctatgagctggtgaacagtctggagcttgctgcctccgtcaacccagttggcatc
aaacctggcacaatggctttgccagctctgggtgcacagtacccagtgttcagcgccact
cctgcgcccaaactgattgaggacgggaaggtgcacacagtggagcatctcatcaaccct
ttgaccatccaacaccccgaacacaccactgccaccgctgccgccacagtcctgcctgca
gtgtccactcctcctccattccagggtcgtcccatcactcctgtctatgccatggcccac
aatgttcagcgcatccccacggctgccggcctgtacggaccgggctacgtccccatcaca
aactacacggccaacacggctgctctggctgccctgcagaaaaacgcagccatgaccgcc
gctgcatacggaagttacgccggctacgccgtgccgcagcccttccccgcggccgccttt
cagctgcccatccacgacgtctaccagacatactga
DBGET
integrated database retrieval system
