Oryzias melastigma (Indian medaka): 112157131
Help
Entry
112157131 CDS
T07439
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112157131
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
FERM domain-containing proteins
112157131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_f0
FERM_C_FAK1
PDZ_2
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
112157131
NCBI-ProteinID:
XP_024145465
Ensembl:
ENSOMEG00000022070
UniProt:
A0A3B3CSY9
LinkDB
All DBs
Position
LG1:complement(27913900..27965961)
Genome browser
AA seq
1951 aa
AA seq
DB search
MEVQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSHSLSRDRAAADGKPAGSSGCDHRNY
PFRFNVQIQRDPNLNSHGFTLSSQTPILVEEVTPGGPADGRLVPSDQLVKINNVAVDDLT
PEQAAEIIRECQETMSVTVLRIMLGPKSSFITPEKRAKLRSNPVKVHFAEEVEVNGHSQG
NSLLFLPNVLKVYLENGQTKAFKFEPSTTVKDIVMTLKEKLSLSRIEHFSLVLEQQYSSN
KLQLLHEDERIQQVVQRKEVHDYRCLFRVCFMPKDLRKMLQEDPTAFEYLYQQGVNDVLQ
ERYAVEMRCNTALRLAALHIQERLVSCGQSPKVNLKTITKTWGIENFVSSTLLRNMREKD
LRKAVGYHMKKSQSQYDPKQKGLTADQARINYLEELSDLKCFGGKSFGATLMLQDRESMV
TLLVGARYGVSQVVNHKLNILTTLTEFSCITRVELLPESEKVSLVKIYLQDIKPITLLLE
AAAAKDMSCLIAGYCRVFIDPNLNVFPWTDDKKHKVSAEEGYVSRCASDSDDSSDLDTEP
LLSLGLQDQRPCPRVRSSSDPDGRKRKNRGRMRSRDGKEKGSKPWEDNKRKDLKNITAEV
ETPPPEVGLIQITQTDSEGLGGVKGRSGEEQPSVSEASDSVTTDSRVLTSPSSDSLDALE
EDDLISCSSSSVHPNALTSSHVCVHAPLQLHSDRHAQPHLLIPPPAHSHPFLHLSRDGGC
RRSGGGTDPQLPAHQACSGKCSDDGSLCFAELSRRTDILPSPPEASEEDEEEELRKRAKM
QKVEITVRKASEGEGGPAERPLSPSPVSSNTDFVFNFDQSDARCYYNLCSNITPDSARSL
PRPSSHSPAEPRAEVNPTDLEPIPILQPPPGFGDSSSDEEFFDARDGFNSPEDPTSGSAP
RETKPDSLSLTDIRVSVDGEAEAEKTGEPHKEGDGETVFLLRKRSRKRRSFMETDFTSRV
TYPALDSESKHNPASNRLLKALLTEASNAHLLTSDPEPSEQTQNPSPTVSSLTHSEGEPS
ELESKPIPSKLDPHGLASLSSFEPNRNLNSPSRTRKQEMEMEPDTMESKSVTDLVPASSI
TVIRWRVDPDGKESADRKCDGKEEEGEEKRETDATENGPFTRHMFLPKTIEEEEEEKKEE
QRGVSSSLKRPLIGFEMPKEGIAVPTCSNKRTIEGFSDSNFIFLNLNTLIDECSPPSYSP
PPPPPSSPLPPVPTEHKIKNDCLLKERRSLLNQITPLNHKEQSVFFSSESRRLKESTNSD
EVTDSTNSDVFEEDFIRADTPERSSSDLSDAAMKEETPTPTELRPDLEDRAGMCSGNVEC
IAALKSIEAKLGATTAGSPEVKGHAVPQIVFFQTTEKQDGDATVRLQSPSPMAAKASTIH
DLSKDQPSSPHFLFQAGSPSIMGRLSASTLRGKIQNLPLYLSRSQDGLNRAGDGGSVQSP
ADSIKDVDETPVSDPAAAAESPESDDSDATLTGSEVDEEFSAETVTTRCSEVEDVGSQLP
VQTEPKVQSHSETVCAGLHQNTPGPVTEPPASIGNPFDRHSKTDTPGPVKDSPKPNPNVS
IPEDDGRPFDKDPSSFAPPPIVVTTQNLNGPSFRSQRVTGTSSDRPLMGFCRPEQNSDSV
KPLSNECKLFTICEAAKAQTEVGSGPVFKPGSACASVLASGCESVVEGMQVPLDACGCPT
IYTSCFSGEDAFDEELTVYEFSCRTQSSGLSQMSGVLRPVMTSPPVPMFLSASSIHSPSL
PQSVLFSSELSPLLSPLSDTSDSYVPQPHKDTINHLGRQRYPEPPAGFQVLRLEVDKLLS
NLEGNGPDRSFTGHGGRHPRETCPVHFTENKRVLQVEARRLMSGCQRVVGIGQSPEEMLH
ALADSFRTLVGLTTICLWFSGCDRCDRRNAEAVAGLADVARSFRDFCLAAERASSKRSCQ
DLSTKLLAKQCTALTASVFCLTQLFRTLTAL
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcaggatcggagccgctccccctcccgcaggaccagccgggtggagcaggtg
gtgggacgatggctgagacgctctcgagatttgggcagcaggtcccactctctgagcaga
gatcgagccgcggctgatgggaagccagcagggtccagcggctgtgatcacaggaactac
ccgttccgcttcaacgttcagatccaaagagacccaaacctgaactctcatggcttcaca
ctctcctctcagacccccatcctggtggaggaggtcaccccaggtggtcctgcagatggt
cggctcgtcccaagtgaccagttggtgaagatcaataatgtagcagtcgatgacctgacc
ccagagcaagccgctgaaataatcagggagtgtcaggagaccatgagtgtgacggtactc
agaataatgctgggcccaaagtcctctttcatcacaccagagaagagggcgaagctcagg
tccaaccctgtgaaggtccacttcgctgaggaggtggaggtcaacggacactctcagggg
aactcgctgctcttcctgcccaacgtgttgaaggtgtatctagagaacgggcagactaag
gccttcaaatttgagcccagcaccacagtgaaggacatcgtgatgacgctgaaggaaaag
ctttccttgagccgcattgagcatttctctttggtgctggagcaacagtacagcagcaat
aaactgcagctgcttcacgaagacgagaggatccagcaggtggtgcagaggaaagaggtc
cacgactacaggtgtctgttccgtgtttgcttcatgcccaaagacctccggaagatgctg
caggaggacccaaccgcctttgagtacctctaccagcagggcgtgaacgacgtgctacag
gagcgctacgccgtggagatgaggtgtaacacggccctgcggctcgctgctctgcacatc
caggagaggctggtgagctgtggacagtccccgaaagtcaacctgaagaccatcacgaag
acgtggggcatcgagaactttgtgtcgtccactttactgaggaacatgcgagagaaagac
ctcaggaaggccgtgggataccacatgaagaagagccagtcgcagtacgaccccaaacag
aaaggcctgacggcggatcaagctcggatcaactacctggaggagctgagcgacctcaag
tgttttggagggaaatcttttggcgccaccttgatgcttcaggaccgggagtccatggtg
accctgttggtgggagctcgctacggggtgagtcaggtggtcaaccacaagctgaacatc
ctgaccaccctcaccgagttctcctgcatcactcgcgtcgagctgctacccgagtctgag
aaggtcagcctggtcaaaatatacctgcaggacatcaagcccatcacgctgctgttggag
gccgctgcagccaaagacatgtcctgtttgatcgctggctactgccgcgtctttattgac
cccaacctcaacgtctttccctggacggatgacaagaagcacaaagtttcagctgaagaa
ggttacgtgtcccgatgtgcgagcgactcggacgactcctcggacctggacacggagccg
ctgctcagcctggggcttcaggaccagaggccctgccctcgtgtccggtcctcatccgac
ccagatggaaggaaaagaaaaaacagagggaggatgaggagcagggatggaaaagaaaag
gggagcaaaccgtgggaggataacaagcggaaagatctgaagaacatcactgcagaggtg
gagacgcctccaccagaggtcggactgatccagatcacccaaacagactcggagggactc
ggcggggtgaaagggaggagtggagaggagcagccgtctgtgtcggaagcgtcggattca
gttacgaccgactcccgtgtcctcaccagcccctccagcgactctctggatgctctggaa
gaagacgacttgatttcatgctcgtcttcctccgtccatcccaacgcactcacgagttct
cacgtttgtgtccacgctcccctccagctgcactccgaccggcacgctcagccacacctc
ctcatacctccaccggctcactcccatcccttcctccacctcagcagagacggaggctgc
aggaggtcgggcggcggcaccgacccccagctccccgcccaccaggcgtgctcggggaag
tgctcagacgacggctcgctgtgcttcgccgagctctcccgccgcaccgacatcctgccc
agtcctcctgaggccagcgaagaagacgaggaggaggagctgaggaagagggccaagatg
cagaaggtggagatcacggtgagaaaggcgagtgaaggagagggggggccggccgagcgt
ccgctctctccgtctcccgtttcctccaacacggactttgtctttaacttcgaccaaagc
gacgctcgctgctactacaacctctgctccaacatcacccccgacagcgcccgcagcctc
ccacgcccgtccagccactcccccgcagaacccagggcggaggtgaaccccacagacctg
gagccgatccccatcctccagccgccccccggcttcggggacagcagctccgacgaagag
ttcttcgacgccagagacggcttcaactcccctgaagaccccacctcaggatctgcgccc
agagagacaaagccggactccctcagcctcacagacatcagggtttctgtggacggagaa
gcagaagcagaaaaaacgggagaacctcacaaagaaggagacggcgaaaccgttttcctc
ctcaggaagagatcccggaagcgccgctccttcatggagacggattttacctcgagagtg
acgtacccggcgctggactctgaatcaaagcacaacccggcctccaacagactcctgaaa
gcccttctgacggaagccagtaacgctcacctgctcacttccgaccccgagccctcagaa
caaacccagaatccaagtcccaccgtctcctcgctcactcactccgaaggagaacccagc
gaactggagtccaagcccatcccgtccaaactcgaccctcacggactcgcctctctttct
tcctttgagccgaacagaaacctaaactctccatccagaaccaggaagcaggaaatggag
atggaacccgacacgatggagtccaaatccgtgacggatctggttccggcttctagcatc
acagtcatccgctggagggttgatccggacgggaaggagagcgccgatcggaagtgcgac
gggaaagaggaggagggagaggagaaaagggagacggacgccacggaaaacggaccgttc
actcgtcacatgtttttacccaaaacaatcgaggaggaggaggaggagaagaaggaggag
cagagaggagtctcctctagcttaaagagacctttgattggttttgaaatgccaaaagaa
ggcatcgccgtgccgacgtgttctaacaaacgaaccatcgagggcttttcggactctaac
ttcatctttcttaatctaaacacacttatcgatgaatgttctcctccttcttattctcct
ccgcctcctccgccgtcctccccgctgccccccgtccctacagagcacaagatcaaaaac
gactgtttgctgaaggagaggcggagcttattaaaccaaatcactcctttaaaccacaag
gagcaaagtgtgtttttcagctcagagagtcgtcgcctcaaagaatccacaaacagcgat
gaagttaccgacagcacaaactcagacgtcttcgaggaagacttcatcagggccgacacg
ccggagcggagcagcagtgatctgtcagacgccgccatgaaggaggagacgccaaccccc
accgagctccgcccagacttagaggatcgggcaggaatgtgttcgggtaatgtcgaatgt
atcgctgctttaaagtctatcgaggcgaagctgggagcgacgacggctgggagtccagag
gtgaaaggtcacgccgtaccgcagattgttttctttcaaaccacggagaaacaagatggc
gacgccaccgtgcgtctgcagagtccgagcccgatggcggctaaagccagcacaatccac
gatctctccaaagaccagccatcctcgcctcacttcctgttccaggcgggctccccgagc
atcatgggaaggttgtcggcgtcaacgctcagagggaagatccagaatctgcccctgtac
ttgtcacgctcccaggacggcttgaaccgcgccggagacgggggttcggtccagagtccg
gctgacagcatcaaagatgtggacgaaaccccggtgtcagatcctgcggcagcagccgag
tcgcccgagtctgacgattcggacgcgactctcactgggtcggaggtggacgaggagttt
tcggcagaaaccgtaacgacgaggtgttcagaggtggaagatgtcggctctcagctgccg
gtccagaccgagcctaaagtccagagtcacagcgagactgtgtgtgccggactccaccag
aacaccccaggtccggtaacagaaccaccagcctccattggaaacccctttgacagacac
tcgaagacagacactcctgggccggtgaaagattccccaaaaccaaaccccaacgtcagc
attccagaggacgacggtcggccttttgataaagatccgtcttcttttgctccgcctcca
atagtggtgacgactcagaacctaaacggaccttcttttcggtctcaaagagtaacgggg
acgagcagcgacaggcctttgatgggtttttgtcgacctgagcagaactcggactccgtc
aaacctctttccaatgagtgtaaactgtttacaatctgtgaggctgccaaggcccagacg
gaggttgggtccggtccggtcttcaagcccggctcggcctgtgcttctgttctagcatct
ggctgcgagtcagtcgtggagggcatgcaggtgcctctggacgcctgcggctgtcccacg
atctacacgagctgcttcagcggagaggacgccttcgacgaggagctcacggtctacgag
ttctcctgccgcactcagagcagcggactcagccagatgtccggagtcctccgtccggtc
atgacgtctcctccggttcccatgtttctctccgcctcctccatccattctccctcttta
ccccaatccgtccttttctcctccgagctgagccccctgctgtctccgctgtcggacacc
tccgactcatacgtaccccaaccgcacaaagacacaatcaatcacttaggtcggcagcgg
tacccggaaccacccgccggcttccaagtcctccgcctggaggtggacaagctgctgtct
aacttggagggtaacggccccgaccggtcttttacgggtcatggaggccgccacccgagg
gaaacctgccccgtgcactttacagagaacaagagggtgcttcaggtggaggcgcggcgg
ctcatgtccggctgtcagagggtggtggggatcgggcagagcccggaggagatgcttcac
gccttggcggacagctttcggaccctggtggggctgaccaccatctgcctgtggttctcc
ggctgcgacaggtgtgaccgaaggaacgcggaggcggtggcgggcctggcggacgtggcc
cgctccttcagggacttctgcctggcggcggagcgagccagcagcaaacgcagctgccaa
gacctgagcaccaagctgctggccaagcagtgcacggcgctcaccgcctccgtcttctgc
ctcactcagctgttccgcaccctaaccgctctatga
DBGET
integrated database retrieval system
