Oryzias melastigma (Indian medaka): 112157189
Help
Entry
112157189 CDS
T07439
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112157189
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112157189
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112157189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112157189
NCBI-ProteinID:
XP_024145566
Ensembl:
ENSOMEG00000010444
LinkDB
All DBs
Position
LG1:31015451..31023457
Genome browser
AA seq
427 aa
AA seq
DB search
MAENDVDTELLDYEEDEEPQGLPESGTPASKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGMAIKNNEDTLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEVDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgacgttgacactgaacttttggactatgaggaggacgaggagcctcaa
ggactcccagaaagcggcactcctgcgagcaagaaggaggtgaagggttcctacgtgtcc
atccacagctcgggcttcagagacttcctcctcaaaccagagctgctccgtgccatcgtt
gactgtgggtttgagcacccctcagaagttcaacacgagtgcattcctcaagcgatcctg
ggcatggacatcctgtgtcaggccaagtctgggatggggaagacggctgtgttcgttctg
gccacgctgcagcagatcgagccagtggatggacaggtgtccgttctggtgatgtgccac
actcgggagctggccttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtgaaggtttccgtgttcttcggggggatggccatcaagaacaacgaggacaccctg
aagaagaactgccctcacattgttgtggggactccggggcgcaccttggccctcattcgg
aacaagaccctcagcgtgaagaacatcaagcactttgtgctggacgagtgcgacaagatg
ttggaacagttggacatgcggcgtgacgtgcaggagatcttcagattgacgccccacgag
aagcaagtcatgatgttcagtgcgactctgagcaaggagatccgtccggtgtgtcgcaag
ttcatgcaggatccgatggaagtgttcgtggacgatgagaccaagctgactctccacggc
ctacagcagtactactgcaagctgaaggacagcgagaagaacaggaagctgttcgacctt
ctggatgtgctggagttcaaccaggtggtgatctttgtgaagtcggtgaaccgctgcgtc
gctctgtcgcagctgctggtggagcagaacttccccgctatcgcgatccacagaggcatg
gcgcaggaggagaggttatctcggtaccagcagttcaaagacttccagcggcggatcctg
gtggccaccaacctgtttggacgaggcatggacatcgagcgcgtcaacatcgtcttcaac
tacgacatgccggaggattccgacacgtacctccacagggtagcacgtgccggcagattc
gggaccaaaggtctggccatcaccttcgtgtcggacgaggtcgacgcaaagactctgaac
gaggtccaagatcgctttgaggtcaacgtagccgagctgcccgacgagatcgacatctcc
tcgtacattgaacagtccagatga
DBGET
integrated database retrieval system
