Oryzias melastigma (Indian medaka): 112157214
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Entry
112157214 CDS
T07439
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112157214 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112157214 (utp6)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112157214 (utp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
112157214
NCBI-ProteinID:
XP_024145592
Ensembl:
ENSOMEG00000017487
UniProt:
A0A3B3DRZ1
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Position
LG1:complement(23363873..23375022)
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AA seq
595 aa
AA seq
DB search
MAEIVQQRIEDRIPELEQLERVGLFTKKEVKSVVKRATALEYKLHRMIVNKEDFIAYIQY
EINVLELIKKRRAHINYNFKREEIEFPIIHRINSIFRRATKKWKDDVQLWLSHVAFCKKW
ATKGQLSKVYSAMLAIHPDKPALWIMAAKSELEDRESSESARHLFLRALRFHPNNKKVYQ
EYFRMELLHAEKLRKQKAELEKAEIDLGEYEFSPEILSGRLAEIVYKDATGKIKEAEFVI
SLLNIAAIFDFTKELQDSILQDLQTNYAADGLMWDFMARRELEAPGVGEELHSAKARASD
INRKEERCCLIYEEGLKVASTEPMWSCYLDFCMERRKRKTNVEELMEKRQERLLGVLQRA
HDASLLKEDYYKSWLQILLSSGDAEGAASVAMAATERYRQSVTMWSLSLQTLMEVGSGDM
ARFFQEALTHVNPKESLPLWQLQLQWSMATQTPEETEAIFKRGLQSAVPAIAMEMKDGFL
NWSYSTGGYKKARKTFKSLQEIRPLSKAFFTRMIEIEKEQETPKMNYLREYYERALQEFG
TSDDDLWLQYIQEELSPLGQPENCGKIHWRAMKFLEGESVERFISKYTLFQTGHL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatcgtgcagcagcggatcgaggaccggatcccggagctggagcagctcgag
agagtgggtctgttcaccaaaaaagaagtcaagtccgttgtaaagagggcaacagctcta
gaatacaagcttcacaggatgatagtgaacaaggaggatttcattgcatacattcagtat
gaaatcaatgttttagaactgataaagaagaggagagcacatataaactacaacttcaaa
cgagaggagatcgagttcccaatcatccacagaataaacagtatcttcagaagagccaca
aagaagtggaaggatgatgtccagctttggctttcccatgttgccttctgtaagaaatgg
gccaccaaaggacagctcagcaaggtgtactcagctatgctcgctatccaccctgacaaa
ccagcgctgtggatcatggctgccaagagcgagctggaggaccgagagtcctctgaaagc
gctcggcacctcttcctgcgagcgctgcgttttcacccaaacaacaagaaagtctaccag
gagtatttccggatggagctgctgcacgctgagaaactgaggaagcaaaaggcggagctg
gagaaggcggagattgacttgggtgaatatgagttttctcctgagatcctgagcggcaga
ctggcggaaatagtgtataaagatgctacagggaaaatcaaagaagcagagttcgtcatc
tcgttgctgaacatagccgccatctttgacttcaccaaggagctccaggactccatcctg
caagatttacagaccaactacgcagcagacggcttaatgtgggacttcatggccaggagg
gagttggaggcgccgggggtgggggaggagctgcacagcgccaaagctcgggcgtcggac
atcaaccgcaaagaggagcgctgctgcctgatttatgaggaaggcctcaaggtcgccagc
acggaacccatgtggagctgctacctggatttctgcatggaaaggaggaagagaaagacc
aacgtcgaagagctgatggaaaagaggcaggaaaggctgctgggagtcctgcagcgcgcc
catgatgcctcgctgctgaaggaggattattacaagagctggctgcagatcctgctttca
tctggggatgctgagggagccgccagcgttgccatggcagccacagagcgctaccgccag
tcggtcacaatgtggagtttgagtctgcaaacactaatggaggtgggaagtggagacatg
gccaggtttttccaggaggctctcacacatgtcaaccccaaggaaagcctgcctctgtgg
cagctgcagcttcagtggagcatggcaacccaaactccagaagaaactgaagctatcttc
aagagaggtctgcagtctgcagtccccgctatcgccatggagatgaaagacggctttctc
aattggtcatactccactggaggatacaagaaagccaggaagacatttaagagcttgcaa
gaaatccgccccttgtccaaggccttcttcaccagaatgattgagattgagaaggaacaa
gagactcctaagatgaactatctgagggaatactacgagagagcgctgcaggagtttggc
acctcggatgatgatctgtggctgcagtacatccaggaggagctgagccctcttggccag
ccggagaactgcgggaagatccactggagggccatgaagttcctggaaggcgaaagcgtg
gagagattcatttccaaatacaccctgtttcagaccggacacttgtga
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