Oryzias melastigma (Indian medaka): 112157238
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Entry
112157238 CDS
T07439
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112157238 (sorcs3)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Others
Others
112157238 (sorcs3)
Endosome - Lysosome transport
112157238 (sorcs3)
Endosome - Golgi transport
112157238 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
112157238
NCBI-ProteinID:
XP_024145642
Ensembl:
ENSOMEG00000020906
LinkDB
All DBs
Position
LG1:25676149..25963513
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AA seq
1184 aa
AA seq
DB search
MEARAGARPDWHLSLGIWVMIAALQHAEAGITCARCPSPVRLQQEDLQLTEESLRSVQLE
FRAEDGSLEEVAPQDAALGSGRDRGSGAAGSADSALLRAKRSAPELAEFGGADVGAPGER
GPALDGHRGGRPELRWSREDGGASNPLSSSTFALTGDSAHNHAVVYWSGRNSSVILILTK
LYDFHIGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKIMVLTDPEFES
SVLISTDEGASFQKFRLSFFVLSLLFHPTEEDWALAYSHDQKLYSSLDFGRKWQLIHEHV
TPNRFYWSVAGLDKEPDLVHLEAHTPDGNVQYITCRAQMCTEGNRNYPFPGFIDISSLIV
QDDYIFIQVPTSGRATYYVSYRRDSFIEIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQN
DTYNLYLSDTRGIFFTWAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDSQVKTYI
TYNKGRDWRLLQAPPTDLDGNEIHCILPFCSLHLQLQTSENPYISGTISTKSSSPGIIVA
TGNIGAELSYNNVGMFVSSDAGNTWRQIFEEEHNIWFLDRGGALVAVKQPSVPTRNLWVS
FDEGRQWSQYTFSSVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYRAIFSRKC
TEEDYQTWHLHNQGEPCVMGQKQIYMKRRPGNHCMLGVDYSTVLSAESCICRAHDFECDY
GYERRSDGNCRPSFWFNPYTVSRSCSQGQNFFNSTGYRKVVLNNCTKGVKEIYTARKQQC
PNRPPKGLVLTTKDGKLTANRGSNVTFLVHFDEGDSMRTNIQLDFGDGTAVSYSNLSWTE
EGIKHAYKSAGIFRVTALAENTLGYDSTTLFLHVTCPVEHVQLLAPFVVIRNKEVNITAV
VLPIQPRTVTYFWWLGNNTEPLITLDGSISYTFRSEGMHTITVQVSAANTILQDTKTIAV
KEFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVCDFPGEQLLVAVFPGVPTAA
ELFLLPNKNQSEGRKKSEDALEQTSSTIVNALNQNLVEFELKPGVRVIVYNTQLTLAPLV
DSSPRHNSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQSDS
TPKITLSEFTASKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcgggctggcgcgcgcccagactggcacttatctctgggcatctgggtgatg
atcgccgcgttgcagcacgcagaggcggggatcacttgtgcccgttgcccgtctccggtt
cggctgcagcaggaggatttacagctgacagaggagagcctgaggagcgtccaactggag
ttcagagccgaggacggcagtttggaggaagttgctccacaggatgctgccctcgggtcc
ggcagggatcggggatcgggggcggcggggagcgcggacagtgcgctcctgagagccaag
aggagcgctccggagttggcagagttcggtggcgcggatgtgggcgcgccgggggagcgg
ggccccgcgctggacgggcacagagggggcagacccgagctccgctggagcagggaggac
ggcggagcgagtaacccgctaagcagcagcactttcgcgctgacgggggactctgcgcac
aaccacgccgtggtgtactggtcaggacgcaacagcagcgtgatcctgatcctcacaaag
ctctatgactttcacattggcagcgtcacggagagcacgctttggagatccactgactat
ggctccacgtatgagaggatgaacgacaaagttggatccaagaccgtcctcagctaccta
tacgtctgtccgtccaacaagaggaagattatggtgttgaccgatccggagttcgagagc
agcgtcctcatcagtaccgacgaaggagccagcttccagaagttccgcctctccttcttc
gtcctgagccttttgttccaccccacagaggaggactgggctttggcttacagccatgac
cagaagttgtacagctcactagactttggaaggaagtggcagctcatccatgaacacgtc
accccaaacaggttctactggtcggttgcaggtctggataaggagccagatctggtgcac
ttggaggctcacactccagatggaaatgtgcagtacatcacatgcagagctcagatgtgc
acggagggtaacaggaactatccttttcccggattcattgacatcagctccctgatagtt
caagatgactacattttcatacaggttcctacatcaggacgagccacctactatgtgtcc
tacaggagagactccttcatagaaatcaaacttcccaaatattccctgcctaaggattta
cacatcgtcagcacggatgagaagcaggtgtttgcggcggtgcaggagtggaaccagaac
gacacctacaacctctacctgtccgacacacgggggattttcttcacttgggccatggaa
aatgtcaaaaccaccaggggcattggcgggaaccaaatgctggacctctatgaggtggct
ggaataaaaggcatgctgatcgcaaacaagagacaggacagccaggtgaagacctacatc
acctacaataaaggcagagactggaggctgctgcaggctccgcccacagacctggatggg
aatgaaatccattgcatactgcctttctgctcccttcatctgcaactccaaacgtcagag
aacccgtatatatcaggaaccatctctaccaagagttcttcaccgggaatcatcgtcgcc
acaggaaatatcggagccgagctgtcttacaacaacgtgggcatgtttgtttcatcagac
gctgggaacacctggagacagatatttgaagaggaacacaatatttggttcctggacaga
ggaggggctctggttgctgtgaaacagccatcggttccaaccagaaacttgtgggtcagc
tttgacgaggggcgacagtggagccagtacacgttctcctcggtgccattgttcgtggat
ggggtcttggtggaggccggtgctgagaaccaaattatgactttctttggccacttcagc
catcgctccgagtggcagctcatcaagatagactacagggccatcttcagcaggaagtgc
acggaggaggactatcagacgtggcacctgcacaaccagggtgagccatgcgtgatggga
caaaagcagatttacatgaaacgccggcctggaaaccactgcatgctgggagtcgactac
tccaccgtcctgtcagccgagtcgtgcatttgccgagctcatgatttcgaatgtgattat
ggatatgaacggcgcagcgacggaaactgccggccctccttctggttcaatccctacacc
gtttccaggagctgcagccaaggtcagaacttcttcaacagcacagggtatcgtaaagtg
gtgctaaacaactgtaccaaaggagtcaaagagatttacacagccagaaagcagcagtgc
cccaacagacctcctaaaggacttgtgctgaccacaaaagacggcaagctcaccgccaac
cgtggcagcaacgtcaccttcctggtgcactttgacgagggcgactccatgcggaccaac
atccagctggattttggcgatggcacagccgtttcttactccaacttgagctggactgag
gaggggatcaagcacgcatacaagtcagcgggaatctttcgggtcacagcgcttgcagaa
aatactctcggttatgactcgacaacgctgttcctgcatgtcacttgtccggtggagcac
gtccagcttctcgccccatttgtggtcatcagaaacaaggaggtgaacatcacagcggtg
gttcttcctatccagccgcgcaccgtcacctacttctggtggctcggcaacaacacggag
cccctgataacgctggatgggagtatctcctacaccttcaggagtgaaggaatgcatacc
atcactgtccaagtatctgcagccaacaccatcctgcaggacaccaagaccatagcagtc
aaagaattcttcaaatctctacttttatctttctccccgaatctggacgagtttaacccc
gacatccctgagtggaggcaggatgtggggagagtaattaagaaggctctgctccaagtt
tgtgactttccgggggagcagctcttggttgccgtgtttccaggagttcctacagctgca
gagctcttcctgttacccaacaagaaccaatcagagggcaggaagaagagcgaggacgcc
ctagagcagacgtccagcaccatcgtgaatgccctgaaccaaaatctggtagagtttgag
ctgaagcctggagtacgagtgattgtgtacaacacgcagttaacactggcgcccttggtg
gactccagcccccggcacaacagctctgcgatgctcatgctcctgtcggtggtgttcctc
ggcctggccgtctttctcatctacaagtttaagagaaaaataccttggatcaacatatac
gctgaggtgaaccaagagaaggagcaggagatgatcggctcagtgggtcagagcgacagc
acgccaaaaatcaccctgagcgagttcaccgcatcgaaagaactcatggagaaggagctg
gacgctcgggtcaagagaggagtcgggaacgcctgcgagagcacaagggagattccaaac
tgtaccagtgtgtga
DBGET
integrated database retrieval system
