Oryzias melastigma (Indian medaka): 112157364
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Entry
112157364 CDS
T07439
Name
(RefSeq) protein jagged-1a
KO
K06052
jagged-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
oml04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112157364
04371 Apelin signaling pathway
112157364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112157364
CD molecules [BR:
oml04090
]
Proteins
112157364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
EGF_CA
JAG1-like_EGF2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
112157364
NCBI-ProteinID:
XP_024145831
Ensembl:
ENSOMEG00000008569
LinkDB
All DBs
Position
LG1:complement(29907404..29955204)
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AA seq
1222 aa
AA seq
DB search
MSLSRSPAHRSTARALQLLLLSACFQVSAASGHFELRILSLQNKNGLLQSGACCEGSPDV
LSGRCTGGQCQTYFRVCLKEYQLKVSPTGPCSFGTASTPVLGGNTFSFVNLKNSRSRILL
PFSFAWPRSYTLILEALDFNDSSSSGSVGGTLIEKATHSGMITPSPQWQKLEHNGAVAQF
HFQVRVRCDEHYFGFGCNKFCRPRDDFFGHYTCDQNGIKTCLEGWSGPDCNAAICKQGCI
HGSCDVPGECKCLYGWQGEHCDRCILHPGCVHGSCMAPWQCICDTNYGGQLCEKDLNTCG
TQQPCLNGGTCSNTGPDKYHCSCPEGFSGVNCQIAEHACLSGPCLNGGSCSENSQSFQCL
CAPGWTGPLCSTDVDECLENPCGHGGTCQDLVGGFRCICPPQWTGKTCLIDANECDDNPC
IHAKSCRNLIGGYFCQCLPGWRGQTCNINIDDCHGQCQNGATCKDLVNGYKCECAPGFGG
EHCERDLDDCASGPCLNGGSCHDRVNGFHCLCPSGFSGRQCQMDIDYCLDSPCLNGGRCF
NSVDDYICECPEDYEGKNCSLLKDHCLTAPCKVIDSCTVAVASNSTPSGVRLISTSVCSP
HGQCQSHANGQFSCKCEEGFSGTYCHENINDCEMAPCLNGGTCIDEVSRYRCLCPRGWEG
PTCESNIDDCSSAPCQNRGVCQDLTTDFYCKCSNGWKGKTCSSRESQCDEMTCNNGGTCY
DEGDAFKCLCTAEWEGSTCNIAKNSSCLPNPCENGGTCVVDGDSFSCICREGFEGTTCTQ
NANDCRPHPCYNSGTCIDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCMDEING
YRCVCPPGRTDPLCQEATDRPCVHGGVVAPHGSRWSDDCNSCRCVNGRVGCTKLWCGPKP
CSLHSADCPPGQSCLAVQDEHCFVKPCVDQGQCWGHAHRATPPSGCHPDAGCSNVTFTFN
KDIMSKGVTVEQICHELRSLFAIKNLSSDSSVSVACEPSPGANNEIHVTVIIDDQQRGLT
FIKDVTDRIMDVVGKRSTNSTIIQAITEVRVQRRPSQDSSGYLLPLLVSMVILVWSLAVG
SALLWCLKRRKPSSHAGVSAPPSSPSGPAAEDNNALHNSVSAAREHLNHIKNPIEKKPPN
HHHLLHHHLCEDKNSLNFKTCKPESSGSQSDEDEAEKKLQKSRFPLAPPAYPSHHTRSKP
PPWTNKQDNRQLQSNQRGGYVV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctctcggagccccgctcaccggagcaccgcgcgcgcgctgcagctgctgctg
ctgtccgcgtgcttccaggtttctgcagcttcaggacattttgagcttcggattttgtcg
ttgcagaacaaaaacgggctgctgcaaagtggagcctgctgcgaaggatcccccgatgtg
ctgagcggccgctgcaccggcggccagtgccaaacctactttcgggtctgtttgaaggag
taccagctgaaggtttccccgacggggccgtgcagctttgggacggcgtccacgcctgtg
ctaggagggaataccttttcttttgtaaatctcaagaacagtagatccaggattttgttg
ccgttcagctttgcgtggccgagatcatacactttgatcttggaggctctggactttaat
gacagctcctcgtctggcagtgttggcgggacgctgattgagaaggccacccactccggc
atgatcacccccagtccccaatggcagaagctggagcacaacggcgccgtggctcagttc
cacttccaggtgcgcgtgcggtgcgacgagcattactttggcttcggctgcaacaagttc
tgccggccgcgagacgatttctttggccactacacgtgtgaccagaacggtatcaagacg
tgcctggagggctggtcggggccggactgcaatgctgccatctgcaagcagggctgcata
cacggttcctgcgacgtccccggagaatgcaagtgtctgtatggctggcagggggaacac
tgtgaccgttgtatcctccatcctggttgcgtccatggcagctgtatggcgccctggcag
tgcatctgtgacaccaactatggaggacagctgtgtgagaaagacctaaacacatgtgga
acgcagcagccatgtttgaacggaggaacctgcagcaacacggggccagacaaataccac
tgctcctgccccgagggcttttctggggtcaactgtcagatagcggagcacgcctgtctg
tccggaccctgtttgaacggaggaagctgctcagaaaacagtcagagcttccaatgcctc
tgtgcccccggatggaccggaccgctctgctccaccgatgtggacgagtgcctggagaac
ccctgcggtcatggaggaacctgccaggacctggtcggtggttttaggtgcatctgcccc
cctcagtggaccgggaaaacctgcctcatcgatgccaatgagtgtgacgacaacccctgc
attcatgccaaatcatgccggaatctgattgggggatatttctgccagtgtcttcccggt
tggagaggccagacctgcaacatcaatatcgatgactgccatggccagtgccagaatgga
gcgacgtgcaaggatttggtgaacggttacaaatgtgagtgcgctcctggtttcggaggg
gagcactgtgagagggatttggacgactgcgccagcgggccgtgcctcaacggcggcagc
tgccacgaccgagtgaatggatttcactgcctctgtccgtctggtttctctggacgacaa
tgtcagatggatatcgattactgcctcgacagtccgtgtctgaacgggggtcggtgtttc
aactctgtggacgattacatctgtgaatgtcctgaagactacgagggcaagaactgctca
ctcctgaaggaccactgcctcacagcgccctgcaaagtgattgacagctgcacggtggcg
gtggcgtccaacagcacgccatctggagtccggttgatctccaccagcgtgtgcagccct
cacggccagtgtcaaagtcacgccaacggacagttcagctgcaaatgtgaagaagggttt
tctgggacctactgtcatgagaacataaatgactgtgagatggccccctgtctgaacgga
ggaacatgcatcgacgaagtcagtcgctatcgctgtctctgtcccagaggctgggagggg
cccacgtgtgagagcaacatcgatgactgcagctccgccccctgtcagaaccgcggcgtc
tgtcaagacctcaccaccgacttctactgcaaatgcagcaacggctggaagggaaagacc
tgcagctcaagagagagtcagtgtgacgagatgacctgcaacaatggaggaacctgctat
gatgagggggatgccttcaagtgtttatgcacagcggagtgggaggggtccacctgcaac
attgcaaagaacagcagctgtctgccaaacccctgtgagaacggagggacctgtgtggtt
gatggagattctttcagctgcatctgcagggaggggtttgagggaaccacctgtacccag
aatgcaaacgattgtcgacctcatccctgttacaatagcggtacctgtattgatggggac
aactggtaccggtgtgaatgcgccgctgggttcgccggtccagactgcagaatcaacatc
aatgagtgccagtcctccccctgcgccttcggttcaacctgcatggatgaaatcaacggt
taccgctgcgtctgtcctcctggaaggaccgaccccctctgccaggaagcgacagaccgg
ccctgcgtgcacggcggcgtggtggctccgcacggaagcagatggagcgacgactgcaac
agctgccgctgtgtcaacgggagagtcggctgcacgaagctctggtgtggacccaaaccc
tgcagcctgcacagtgcagactgtccgcctggtcagtcttgtctcgctgtacaggatgaa
cactgcttcgtgaagccctgcgtcgaccaagggcagtgctggggccacgcccaccgagcc
acacccccatccgggtgtcacccagacgccggctgctccaacgtgactttcaccttcaac
aaggacatcatgtcaaagggcgtgacggtggagcagatctgtcatgagctcagaagcctc
ttcgccatcaagaacctgtcctcggattcttccgtctcggtggcgtgtgagccgtcgcca
ggagccaacaacgagatccacgtcaccgtcataatagacgaccagcagagaggtctgacc
ttcattaaggacgtcacagaccggatcatggatgtggtcggcaaacggagcaccaacagc
accatcatccaggccatcacagaggtccgcgtgcagagacggccgagccaggactccagc
ggttacctcttgcctctgctggtttccatggtgattctcgtctggagtttggcggtgggc
tcggcgttgctgtggtgcctaaagcgcaggaagcccagcagccacgcgggggtcagcgcc
ccgccctcctccccgtcagggccggcagcagaagacaacaacgccctccacaacagcgtg
agcgcggcccgcgagcacctcaaccacatcaagaaccccattgaaaagaagcccccgaac
caccaccacctcctccaccaccacctgtgtgaggacaagaactcgctcaacttcaaaacc
tgtaaacccgagtcttccgggagccagtcggacgaagacgaggcggagaagaagctgcag
aagagcaggttccccctggcgccgccagcgtatccttcccaccacaccaggagcaaaccc
cccccctggactaacaagcaggacaaccggcagctgcagagcaaccagcggggggggtac
gtcgtataa
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