KEGG   Oryzias melastigma (Indian medaka): 112157449
Entry
112157449         CDS       T07439                                 
Name
(RefSeq) transcription factor Sox-10
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112157449
Transcription factors [BR:oml03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    112157449
SSDB
Motif
Pfam: Sox_N HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 112157449
NCBI-ProteinID: XP_024145944
LinkDB
Position
LG1:22563637..22567121
AA seq 498 aa
MSGEEHSLSEAELSPGGSDDGHSLSPPQPGAAAGHDSPLSGPPQQLTALCVADGGADDAS
RGRAKSEDEDDRFPIGIREAVSQVLDGYDWTLVPMPVRVSNGNKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRKQHKKDYPEYKYQP
RRRKNGKLMPSSESDSQGEGEASHSQSHYKTLHLDHNVGAGSPLGDLHHHHHHHHHPGGH
SPPTPPTTPKTELQSGKLSDAKREGGAGAAGGSGGSRGALGVGADGASGGPSSSSKPHID
FGTMDIGEISHEVMSNIEPFDVNEFDQYLPPNGHPQSGAGAASVGSSASSYAYALAAASG
HSAWISKQQQQQPQASPSSSDPSKAQIKSESASASHYSDASSSPSSGTHVTYTPLSLPHY
GSAFPSLASRAQFDYGEHQAPGAYYAHSSQAPGLYSAFSYMGPTQRPLYTTIGDPSSVAP
SHSPTHWEQPVYTTLTRP
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgtccggtgaggagcacagcctgtccgaggcggagctgagccccggcgggtcagatgac
ggtcactcgctctcaccgcctcagcccggagcggccgccggtcatgactcccccctgagc
gggcctccgcagcagctgaccgcgctgtgcgtggcggacggcggcgcagacgacgcgagc
agagggcgcgccaagtcggaggatgaggacgacaggttcccgatcgggatcagggaggcg
gtcagtcaggtgctggacggctacgactggacgctcgtgcccatgccggtgcgcgtgagc
aacggaaacaaagccaagccacacgtgaagaggcccatgaacgcgttcatggtgtgggcg
caagccgccaggagaaagctggccgaccagtacccccacctgcataacgcggagctcagc
aagactctggggaaactctggaggctgctgaacgagaacgacaagaggccattcatcgag
gaggcggagaggctgaggaagcagcacaagaaggactatcccgagtacaagtaccagcct
cggaggcgcaaaaacggcaagctgatgccctccagcgagtccgacagccagggtgagggt
gaggccagccactcccagtcccactacaagaccctgcacctggatcacaatgtgggtgca
gggtctcccctgggtgacctgcaccaccaccaccaccatcaccaccaccctggaggtcac
agccctcctacgccccccacgaccccaaagacagagctccagtctgggaagttatcagat
gctaaaagggaggggggagcaggggcggccggaggatcaggggggtccaggggtgccctc
ggggtgggagcggacggggcctctggtggcccctcatcgtcctccaagccccacatcgac
tttggcaccatggacatcggagaaatcagccacgaggtgatgtccaacatcgagccgttt
gacgtcaacgagttcgaccaatacctccctccaaacggccatcctcagagcggagctggg
gccgcctctgtcggctcctccgcctcctcgtatgcctacgccctggcagcggcgagcggc
cactcagcctggatctccaaacagcagcagcagcagccccaggcctcgccgtcttcctcc
gatccctccaaggctcagatcaaaagcgagtcggcgtcggccagccattactccgacgcc
tcgtcctcgccctcgtcaggcacccacgtcacctacacccctctcagcctgcctcactac
ggctctgccttcccctcgctggcctccagagctcagtttgactacggagagcaccaggcc
cctggggcatactacgcccactccagccaagctccggggctgtattcagctttctcctac
atgggcccgacacagaggcctctgtacaccaccataggagacccctccagcgtggccccc
tcccacagccccacacactgggagcagcctgtttacaccaccctcacaagaccttga

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