Oryzias melastigma (Indian medaka): 112157521
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Entry
112157521 CDS
T07439
Symbol
rbpja
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region a
KO
K06053
recombining binding protein suppressor of hairless
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112157521 (rbpja)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112157521 (rbpja)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Other transcription factors
Others
112157521 (rbpja)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
112157521
NCBI-ProteinID:
XP_024146067
Ensembl:
ENSOMEG00000014525
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All DBs
Position
LG1:complement(21239576..21246321)
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AA seq
474 aa
AA seq
DB search
MAPVVTGKFDERNPSQHLTREAMRNYLKEKEDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGAGWKKKLEKMENEGCTEQEAQPFAFIGIGNSVQDMQQLHLEGKHFCMAKTLYISDS
DKRKHFMLSVKMLYGNSSNIGLFLSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFCASSQQWGAFYIHLLEDDESEGEEFAVRDGYIHYGKTVKLVCS
ITGMALPRLIIRKVDKQAALLNADDPVSQLHKCAFYLKDTDRMYLCLSQERIIQFQAAPC
SKEANKEMVSDGASWTIISTDKAEYTFCEGMGPVPTPVTPVPVVESLQLNGGGDVAMLEL
TGHNFTPTLRVWFGDVEADTMYRCGESILCVVPDISSFREGWRWVRQPVQVPVTLVRNDG
IIYSTALTFTYTPEPGPQPHCSAAGAILRSHSTSSSSPSSLLRWPQGGSRALKQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgttgttacggggaaatttgatgagcgaaatccatctcagcatctaacaagg
gaagccatgaggaactacttgaaggaaaaagaagatcaaaccgtgctcatacttcatgca
aaagttgcacaaaaatcatacggaaacgaaaaaaggtttttctgtcctccaccctgtgtg
tatctgatgggtgctggctggaagaaaaagttagaaaaaatggaaaatgagggctgcacg
gagcaggaagcacaaccatttgcatttattgggattggcaacagcgttcaagacatgcaa
caacttcatctcgagggaaagcacttctgcatggctaagactctgtacatcagtgactca
gacaaaaggaagcacttcatgctgtcggttaagatgttgtacggaaacagttcaaacatc
ggccttttcctcagcaaacgcatcaaagtcatctccaagccctccaagaagaaacagtct
ttaaaaaacacagacttgtgtatagcatctggaaccaaggtggccttgttcaaccgccta
cgctcacagactgtaagcaccaggtatcttcatgtggaaggggggaacttctgtgccagc
tcccagcagtggggggccttctacattcacctcttggaggacgatgagtcagaaggagag
gagtttgctgtgagggacggatacattcactacggaaagacggtgaagttggtgtgttca
ataactggcatggccctcccacgactgattattcgtaaagtggacaagcaagcagctttg
ttgaatgcagatgacccagtgtcccagcttcacaagtgtgccttctacctaaaagataca
gacagaatgtatctgtgtctttcacaggagcggatcatccaattccaggcggcaccatgt
tccaaagaagctaacaaggagatggtgagcgacggggcctcctggaccatcatcagcacc
gacaaggcggaatacaccttctgcgagggcatgggtccggtaccaacgccagtcacacct
gttcctgtggtggaaagcttgcagttaaacggtggaggagatgtggccatgttggagctg
acgggacacaacttcaccccgactctgagagtgtggtttggagacgtagaggccgacacc
atgtacaggtgtggagaaagcatcttgtgcgtggtgccagacatctcgtctttcagggag
ggctggcgctgggtgcgacagccggttcaggtcccggtcacgctggtccgcaacgacgga
atcatctattccacagccttgaccttcacctacacgcctgagccagggccccagccccac
tgcagcgcagcgggggctattctacgctcacacagcacctcttcatcatcgccttcatct
ctgctgcgctggcctcagggaggctcacgggccctgaagcagtaa
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