Oryzias melastigma (Indian medaka): 112157559
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Entry
112157559 CDS
T07439
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04150
mTOR signaling pathway
oml04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112157559 (lrp6)
04150 mTOR signaling pathway
112157559 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112157559 (lrp6)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112157559 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
112157559
NCBI-ProteinID:
XP_024146138
Ensembl:
ENSOMEG00000021408
UniProt:
A0A3B3CP17
LinkDB
All DBs
Position
LG23:complement(22636175..22663741)
Genome browser
AA seq
1622 aa
AA seq
DB search
MGVALRSFLLLSFSFVIRVAGEPLLLYANRRDLRLVDAAHEKANDSLVVGGLEDAAAVDY
VYAKGLIYWSDVSEEAIKRTFFNQSGAGPVQTVVQGLASPDGLACDWLGSKLYWTDSETN
RIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEVPKIERAGMDGTNRSMII
HKEIYWPNGLTLDYSQQKLYWADAKFSFIHRSNLDGSHREVVVEDELPHPFALTLFESTL
FWTDWNTHSIHSCTKETGRGQRTVHSNIFSPMDIHVFSPRRQSVSVNTPCSLDNGGCSHL
CLLAPSSPFFRCACPTGVQLLEDGRTCRDGATQMLLLARRTDLRQISLDTPDFTDVVLQV
EDIRHAIAIDYDPVEGYLYWTDDDVKAIRRSRLDGSDAQFIVTSQVSHPDGIAVDWIARN
LYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADL
DGMERVVMVNTSLGWPNGLALDYDERKIYWGDAKTDKIEVMNMNGTGRRVLVENKLPHIF
GFTLLGEHIYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLKATFVHQAFGWNPCADGN
GGCSHLCLHKPGGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAI
PLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG
KNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRA
AMDGTGRMTLVGNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLDREVIADDLPHPF
GLTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACAAT
NGHCSHLCLAVPVSSFVCGCPAHFSLNDDNKTCSAPTSFLLFSQKSAINRMVIDEQQSPD
IILPIHNLKSVRAIDYDPLDKHLYWIDSKQNLIRRAQENGNQCTTVVSSSLIGPGQVLQL
YDLSIDIYSRFIYWTNEATNVINVTRMDGSRVGVVLSGEQDRPRAIVVNPERGYMYFTNL
QERSPKIERAALDGTEREVLFFRGLGKPVALAIDNEAGKLFWVDSDLRRIESSDLSGANR
IVIADSNILQPVGLTVFGDHLYWIDKQQQMIERIDKTTRDGRTKVQARVSYLSDIHAVHE
LDMRDYGKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCAPDQFAC
TSGEVDCIPQTWRCDGYSECDDSSDEEDCPVCSDDEFQCDSRQCIDLSLRCNGEVNCQDR
SDENKCDVPPRCPADQFSCSNGQCIGKHKKCDHNMDCSDNSDEIGCYPTEEPPPPTNNTI
NSIVGVVMALFVVGAIYFVCQRVLCPQMKDDGETVTTNDFVVHGPSSMPLGYVPHPSSLS
SSLPGMSRGKSVIDSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPAT
VRSQYTLEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSGS
VAKGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTD
SS
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcgctgcggagcttcttgttgttgagtttttcttttgtcatacgagttgca
ggcgagccgctgctcctgtatgcgaaccgccgggacctccgcctggtggacgccgcccac
gagaaggccaacgactcgttggtggtgggggggctggaggacgccgctgctgtggattac
gtttacgccaagggcctcatctactggagcgacgtgagcgaggaggccatcaaacgcacg
ttcttcaaccagtccggcgccggcccggtccagacggtggtgcagggcttggcctccccg
gacggcctggcttgtgattggctggggagcaaactttactggacagactcagaaaccaat
cggatcgaggtggcggagctggacgggtctctgaggaaggttctgttctggcaggagctg
gaccagcccagagccatagccctggatccggagcgagggtttatgtactggacagactgg
ggggaggtcccgaagatcgagcgggccgggatggacggcaccaaccgctccatgatcatc
cataaggagatctactggcccaacgggctgaccctggactacagccagcagaagctctac
tgggccgatgccaagttcagcttcatccaccgctccaacctggacgggtcccacagggag
gtggtggttgaagacgagcttcctcaccccttcgcactcacgctgttcgagtctacgctc
ttctggaccgactggaacacccactccatccactcctgcaccaaggagacggggaggggc
cagcgcactgtgcactccaacattttctcccccatggacatccacgtgttcagcccccgg
agacagtctgtctcggtcaacaccccctgttccctggacaacggcggatgttcccacctg
tgcctgctggcgccgtccagccccttctttcggtgcgcctgtcccaccggcgtgcagctg
ctggaggacggcaggacctgcagagacggtgcgacccagatgctgctgctggctcggcgg
accgacctgcggcagatctctctggacacgccggactttacggacgtggtgctgcaggtg
gaggacatccgtcacgccatcgccatcgactacgacccggtggagggttacctgtactgg
acggacgacgacgtgaaggcgatccgccgctcgcggctggacggcagcgacgcccagttc
atcgtcacgtctcaggttagccaccccgacggcatcgccgtggactggatcgcccggaac
ctgtattggaccgacaccggcacagaccggatcgaggtgacgcgcctcaacggcaccatg
aggaagatcctgatctctgaggacctggacgagcccagagccatcgtcctggaccctgtg
gcgggatacatgtactggaccgactggggggaggttccgaagatcgagcgggctgacctg
gacgggatggagcgggtggtgatggtgaacacctccctgggctggcccaacgggctcgcc
ctcgactacgacgaacgcaagatctactggggggacgccaagacggacaagatcgaggtg
atgaacatgaacgggacgggccggcgggttctggtggagaacaagctccctcacatcttc
ggcttcacgctgctgggcgagcacatctactggacggactggcagcgccgcagcatcgag
cgcgtccacaaacgcagcgccgagcgcgaggtcatcatcgaccagctgcccgacctcatg
ggcctgaaggccaccttcgtgcaccaggccttcggctggaacccgtgcgccgacggcaac
ggcggctgcagccacctgtgcctgcacaagccgggcggcgtgcagtgcggctgccccatc
gggctggagctgatcgcggacatgcgcacctgcatcgtccccgaggccttcctgctgttc
tccagacacacggacatccgccgcatctcgctggagaccaacaacaacaacgtggccatc
ccgctcaccggcgtcaaggaggcctccgcgctcgacttcgacgtcaccgacaaccgcatc
tactggaccgacatcacgctgaagaccatcagccgggccttcatgaacggcagcgctctg
gagcacgtggtggagttcgggctggactaccctgagggcatggcggtggactggctcggg
aagaacctctactgggccgacaccggtaccaaccgcatcgaggtggccaaactggacggg
cagcaccggcaggttctggtctggaaggacctggacagcccgcgggcccttgctctggat
ccggccgaggggtacatgtactggaccgaatggggcgggaagccaaagatcgacagagct
gccatggacggaaccggtcgcatgactctggtgggaaacgtgggccgggccaacgggctg
accatcgactacgctgagcgccggctgtactggaccgacctggacaccacgctcatcgag
tcctccaacatgctgggtctggaccgggaggtgatcgcagacgacctcccgcacccgttc
gggctgacccagtaccaggactacatctactggacggactggagccagcgcagcatcgag
cgggccaacaagaccagcgggcagaaccgcaccctgatccagggccacctggactacgtc
atggacatcctggtgttccactcgtcccggcagggcggctggaacgcctgcgccgccacc
aacggccactgctcccacctgtgcctcgccgtgccggtcagcagcttcgtctgcggatgc
cccgcccacttctcgctcaacgatgacaacaagacctgcagcgcccccacctccttcctg
ctgttcagccagaagtcggccatcaaccggatggtgatcgacgagcagcagagtccggac
atcatcctgcccatccacaacctgaagagcgtccgcgccatcgactacgacccgctcgac
aagcacctgtactggatcgactccaagcagaacctcatccgccgcgcgcaggagaacggc
aaccagtgcacgacggtggtgtccagctccctgatcgggccgggtcaggttctgcagctg
tacgacctgagcatcgacatctacagccgcttcatctactggaccaacgaggccaccaac
gtcatcaacgtgacccgcatggacggcagccgggtgggcgtggtcctgagcggcgagcag
gaccggccgcgggccatcgtggttaacccggagagggggtacatgtacttcaccaacctg
caggagcgctcccccaagatcgagcgggcggcgctggacggcaccgagcgcgaggttctg
ttcttccgcgggctggggaagcctgtggcgctggccatcgacaacgaggcgggaaaactg
ttctgggtcgactcagacctgcggcgcatcgagagcagcgacctctccggagccaatcgg
atcgtgatcgcagactccaacatcctgcagccggtcggcctcaccgtgttcggagaccac
ctgtactggatcgacaagcagcagcagatgatcgagcgcatcgacaagaccacgcgggac
ggccgcaccaaggtgcaggcgcgcgtgtcctacctgagcgacatccacgccgtgcacgag
ctggacatgagggactacggcaaacacccgtgcacgtgggacaacggcggctgctcgcac
atctgcatcgtgaagggcgacggcacgacgcgctgctcctgccccgtccacctggtgctg
ctgcaggacgagctctcctgtggagagccgcccacctgtgcgccggaccagttcgcctgc
acgtccggcgaggtggactgcatcccgcagacgtggcgctgcgacggctactcggagtgc
gacgacagcagcgacgaggaggactgtccggtctgctccgacgacgagttccagtgcgac
agccgccagtgcatcgacctgagcctgcgctgcaacggcgaggtcaactgccaggaccgc
tcggacgagaacaagtgtgacgtcccgccccgctgtcccgccgaccagttctcctgctcc
aacggtcagtgcatcggcaagcacaagaagtgcgaccacaacatggactgcagcgacaac
tccgacgagatcggctgctacccgacagaggagccgccgcctccaactaacaacactatc
aactccattgtgggcgtggtcatggccttgttcgtggtgggcgccatctatttcgtgtgc
cagcgcgtcttgtgtcctcagatgaaggatgacggcgagaccgtcaccaccaacgacttc
gtggtccacgggccgtcgtcgatgccgctgggatacgttcctcatcccagctcgctgtcc
agctcgctgcccggtatgtccagagggaagtctgtgattgattccctgagcatcatgggc
gggagcagcgggccgccgtacgaccgggcccacgtcaccggggcctcgtccagcagctcg
tccagcaccaaggggacctacttccctccgatcctgaacccgcccccctcccccgccacg
gtccggtcccagtacacgctggagttcggatactcctccaacagcccgtccacgcaccgg
tcctacagttaccggccgtacacctaccgccactttgccccgcccaccaccccgtgcagc
acggacgtctgcgacagcgactacacgccgggccgccgggcgccgctcaagtccggcagc
gtcgcgaagggctacaccagcgacctcaactacgactcggagcctttcccgccgccgccg
acgccccgcagccagtacctgtcggcggaggagaactgcgagagctgcccgccgtcgcct
tacaccgagcgcagctactcccaccacctgtacccgccgccgccctccccctgcacggac
tcctcgtga
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