KEGG   Oryzias melastigma (Indian medaka): 112157600
Entry
112157600         CDS       T07439                                 
Symbol
nrxn3b
Name
(RefSeq) neurexin 3b isoform X1
  KO
K07377  neurexin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112157600 (nrxn3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112157600 (nrxn3b)
Membrane trafficking [BR:oml04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    112157600 (nrxn3b)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 112157600
NCBI-ProteinID: XP_024146185
Ensembl: ENSOMEG00000021431
LinkDB
Position
LG24:3226070..3578997
AA seq 1722 aa
MNPNSLFRRVVMLLSTMLGLSASLEFPGSKGQWARYQRWDASSTSDLTFQFKTSASEGLL
LYFDDGGYCDFLLLTLSEGKLQLHVSIDCAETTITSAKMVNDSRWHFAAINRENLRTGLA
VDGQIKTGEVRPQRHFMKIVSDLFLGGLPEDIRISAITLPSVCELPAFRGVISDLSYGSK
LPTLINSQKVRLEMIGLCTENPCENGGICSLADGETYCDCSRTGYVGRYCTEAVPRKPGL
AHLKAEQGRNKVREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDIKVTRNLRQQSGIGHAM
VNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLR
EVVYKNNDIRLELSRLARIDDPKMKLQGDIVFKCENVPTLDPINFETPDSFLALPKWNTK
RVGSISFDFRTTEPNGLILFTQGRPQDRRDAKGQKNNKVDFFAVELLDGALFLLLDMGSG
TIKVKATQTKVNDEAWHHVDIQRDGRSGIISVNSHRTPFTASGENEILDLEGDLYLGGLP
YNRAGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQIAQSQNITDIKFSCSKVSGKH
CDSSPCKNNGACREGWNRFVCDCTGTGFWDSTCERESSILSFDGTMYMKVVMPNVMHTEA
EDVSLRFMSQRAFGLLMAASSRESADTLRLELDGGRVKLTVNLDCVRINCNTSKGPEVLY
AGEKLNDNEWHSVRVVRRGKNFKLIVDEDMAEGQMAGDHTRLEFNNVETGILTEKRFVSS
APSPFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKASYLGLAT
LQAYTTMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSD
SPLNDNQWHNVVITRDASNTHTLKVDSKSVNQNVNGAKNLDLKGDLFIGGLGPNMYQNLP
KLVVSREGFQGCLATVDLNGRLPDLISDALFRSGQIERGCEVAFTKADLQGPSTTCQEDS
CANMGVCIQQWENFTCDCSMTSYTGTYCNDPGTTYIFGKGGGLITYTWPNNERPSTRADR
LAVGFSTTITDGILVRIDSAPRLADYIMLHIEQGKVGVTFNIGTVDISVKETSTLVNDGK
YHLVRFTRNGGNATLQVDNWPINEHFPSGNSDFERFQMANKKIPFKYTRPVEDWLQEKGR
QLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHPNIKVTGSVRLVGDVP
PSRGATRTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDL
EECDSGHTVDETDGGELVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTIIETTKESLA
MATEAGVPCLSDRGSDDCDGGDGGDDGDDGDDDDGMVISGFGSGEAFDSSLPPTDDEDFY
TTFSLVTDKILTTSAYEGGYKALAPKWEAKDLRPSKASESGRTTPTLAQPNIRGTPPAAV
PSDTPPKLPAGKMNNREVKPPQPDMVLVPLPTSFDMDGTKPRGPFITSPMLRTVPAPLPT
VPGVVRRVPSGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDET
RNYISNSAQTNGAVVKDKAPSSNAKGNASSKRPKDKDKEYYV
NT seq 5169 nt   +upstreamnt  +downstreamnt
atgaatcccaacagcctgttcaggcgtgttgtcatgctgctaagtacgatgctgggtctg
agcgcaagcttagagtttcccggctcaaaaggtcagtgggctcgctaccagcgttgggac
gccagctccacgagtgacctgaccttccagttcaagacctcagcgtcggagggcctgctg
ctgtacttcgacgacggcggatactgtgacttcctccttctcaccctgtccgaggggaag
cttcagcttcacgtgagcatcgactgcgccgagaccaccatcacctcggccaaaatggtg
aacgacagccgctggcacttcgccgccatcaacagggaaaacttgcggactggcttggcc
gtggacggccagatcaagacgggagaggtgcggcctcagcggcactttatgaaaatcgtc
agcgacctcttcctgggagggcttcccgaggacatccgcatttctgccatcaccctcccg
tctgtctgtgagctaccagcgttcagaggagttatctcagacctcagttatgggagtaaa
ctgcccacgttaatcaacagtcagaaggtacgcttggagatgattggcctttgcacggag
aacccctgtgagaacggcgggatctgctctctggcagatggagaaacctactgtgactgc
tccagaactggatatgtaggtcgatactgcaccgaagcagtcccaagaaaaccaggcctg
gcgcacctgaaggcagaacaaggtagaaacaaagtgagagaagaaaatgtggccacgttc
cgcggctccgagtacttctgctacgacttgtcccagaaccccatccagagcagcagtgac
gaaatcacgctgtcattcaagacctggcaacggaacggcctgctcctccacacgggaaaa
tctgctgactatgtcaacctggcgctgaaagatggggcagtttcccttgtcatcaatctg
ggctctggggcttttgaggccatcgttgagccagtcaacggaaaattcaatgacaactcc
tggcacgacatcaaagtgacacgcaacttgagacagcaatcaggcattggacacgctatg
gtaaacaaactacattgtctggtgacaatctccgtcgatgggatcctcaccacaactggc
tacacccaggaagactacaccatgctgggctctgatgatttcttctatgtgggcgggagc
ccgagcactgcagacctgccgggatctccagtcagcaacaatttcatgggctgcctgcga
gaggtggtgtataagaacaacgacatcaggcttgagctctcccggctcgcccgcatcgac
gacccgaagatgaagcttcaaggcgacattgtcttcaagtgtgaaaacgttcccactctg
gaccccatcaactttgagacgcccgattccttcctggctctgcccaagtggaacaccaaa
cgcgtgggctccatctctttcgacttccgcaccaccgaacccaacgggctgatcctcttc
acccaaggccggcctcaggaccggcgggacgccaaaggccagaagaacaacaaggtggac
ttctttgccgtggagctgctggacggagcgctttttctgctgctggatatgggatctgga
accattaaagtcaaagccacgcagactaaagtcaatgatgaggcgtggcaccatgtggac
atccagagagacggacgctcaggcatcatctcagtaaacagccatcggaccccctttact
gcaagcggagaaaatgagatcttggaccttgaaggagacctttatttgggcggtctgccg
tacaaccgggcgggtttggtgctccccacagagctctggacggctatgctcaactacggt
tatgtgggctgcatccgggatcttttcatcgacggacggagcaagaacatccggcagatc
gctcagtcgcaaaacataactgacatcaagttttcctgtagcaaggtatcgggaaagcat
tgtgacagcagcccctgcaagaacaacggagcgtgtagggagggatggaaccggttcgtg
tgtgattgcactgggacgggcttctgggacagcacctgcgagagagagtcgtccatcctg
tccttcgatggcaccatgtacatgaaggtggtgatgcccaacgtgatgcacactgaggcc
gaggacgtatccttgcggttcatgtcgcagcgggcgttcggcctcctcatggccgcctca
tctcgtgagtcggcagatacgctgcggctggagctggacggcgggcgggtcaagctgacg
gtcaaccttgattgtgtcaggataaactgtaacaccagcaaaggccctgaggttctttat
gcgggagaaaagctcaacgacaatgagtggcactcagtgcgagtggtccgtcgcggtaaa
aacttcaagctcattgtggatgaagacatggctgaaggtcagatggcgggcgatcacacc
cgtctcgagttcaacaacgtggaaacgggcatcttgactgagaaacgttttgtttcttca
gcaccttcaccgtttattggtcaccttcagagcctcaaattcaacggcatgcagtacatt
gacatgtgcaaaaacggggacatcgatttctgcgagctgaacgcccgcttcggcatgcgc
ttcatcatcgcagaccccgtcacctttaagacgaaggccagctacctgggcctggccacg
ctgcaggcgtacaccaccatgcacctgttcttccagttcaaaaccacctcgcccgacggc
ttcatcctcttcaacagcggagacgggaacgacttcatcgccgtggagctggtcaaaggg
ttcattcactatgtgttcgacttggggaacgggcccagtctgctgaaagggaacagcgac
agtcctctgaacgacaaccagtggcacaatgttgtcatcacaagagatgcttccaacaca
cacacactcaaagtggattccaagtcagtcaaccaaaatgtcaacggagccaagaacctg
gacctcaaaggtgacctgttcattggaggtttgggacccaacatgtatcagaatctcccc
aagctggtggtttctcgagaaggcttccagggctgcttggccactgtggatctgaacggc
cgcctgcccgacctgatcagcgacgcccttttccgcagcgggcagatcgagcgtggctgt
gaagtggctttcaccaaagccgacctgcaaggtccgagcaccacctgccaggaggactcg
tgtgccaacatgggcgtgtgcattcagcagtgggagaacttcacctgcgactgctccatg
acctcctacacggggacctactgcaatgaccctggcaccacctacatcttcggcaaagga
gggggtctgatcacgtacacgtggcccaacaacgagaggccgagcaccagggcggaccgg
ctggcggtgggcttcagcaccaccatcaccgacggcatcctggttcgcatcgacagtgcc
ccacgcctggcggattacatcatgctccacatcgaacaaggaaaggtgggcgtgacgttc
aacatcgggacggtggacatcagcgtcaaggagacgtccactctggtcaacgatggcaaa
taccatttagtgagattcaccaggaatggaggcaacgccaccttgcaagtggacaactgg
ccaatcaacgagcacttcccctcaggcaacagcgactttgagcgctttcaaatggcaaat
aagaaaatcccgttcaaatatacccggccagtagaggattggcttcaggagaaaggacgg
cagctgacaatcttcaacacccaggccaccatctccatcggtggaaacgaccggaagcgg
ccctaccagggccagctctccggcctctactataacggcctgaaggtcctcaacatggcg
gccgagggccaccccaacatcaaggtgaccggcagcgtgcggctggtgggcgacgtgccg
cccagccggggcgccacgcgcaccaccacgtccgtgccgccggagatgtccaccaccttc
attgagaccacgaccaccctgtctacgacgaccacgcggaaacagagatcgccacctact
attcagacaacagatgacattgtttcctcagcagagtgttccagcgacgacgaggacctg
gaggagtgcgactccggacacacagttgacgaaacggatggaggggaactagtcatcccc
gtgctagtcgaggaccccatagacatcccttctgtctccacccgttcacccttcatcccc
ctccccccaaccctccgccctgtcctcaccattattgagaccaccaaagaatccttggcc
atggccactgaggcgggggtaccttgcttgtcggaccgaggcagcgatgattgtgatggt
ggtgatggtggtgatgatggtgatgatggtgatgatgatgatggcatggtgatttcgggg
tttggctctggcgaagctttcgactctagcctgcccccgactgacgatgaagatttttac
accaccttctccctggtaacagataaaatcttgaccacatcggcctatgaaggcggctac
aaagctctcgcacccaagtgggaggccaaggacttgaggcctagcaaagcctcagagtca
ggtaggactacacccaccttggctcagcccaacatccgaggtacgcccccagcggcagtc
ccatcagacacgccacccaagctgcccgcagggaaaatgaataaccgcgaggtaaagccc
ccacagccagacatggtcctggtgcccttgcccacgtcctttgatatggacggcaccaag
ccccggggccccttcatcacctcgcctatgctgcgtaccgtgcctgctcccttgcccacc
gtgcctggcgtggtgcggcgagtgccctcgggggcctcggaggtgatccgggagtccagc
agcaccacgggcatggtggtaggcatcgtctcagctgccgccctttgcattctcattctc
ctctatgccatgtacaagtacaggaacagggatgagggttcctatcaggtggacgaaacg
cgcaattacatcagcaactcggcgcaaaccaatggcgctgtggtgaaagataaagcgccc
agcagcaacgccaaaggcaatgccagtagcaagagaccgaaagacaaggacaaggaatat
tatgtatag

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