Oryzias melastigma (Indian medaka): 112157600
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Entry
112157600 CDS
T07439
Symbol
nrxn3b
Name
(RefSeq) neurexin 3b isoform X1
KO
K07377
neurexin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112157600 (nrxn3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112157600 (nrxn3b)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112157600 (nrxn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
112157600
NCBI-ProteinID:
XP_024146185
Ensembl:
ENSOMEG00000021431
LinkDB
All DBs
Position
LG24:3226070..3578997
Genome browser
AA seq
1722 aa
AA seq
DB search
MNPNSLFRRVVMLLSTMLGLSASLEFPGSKGQWARYQRWDASSTSDLTFQFKTSASEGLL
LYFDDGGYCDFLLLTLSEGKLQLHVSIDCAETTITSAKMVNDSRWHFAAINRENLRTGLA
VDGQIKTGEVRPQRHFMKIVSDLFLGGLPEDIRISAITLPSVCELPAFRGVISDLSYGSK
LPTLINSQKVRLEMIGLCTENPCENGGICSLADGETYCDCSRTGYVGRYCTEAVPRKPGL
AHLKAEQGRNKVREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDIKVTRNLRQQSGIGHAM
VNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLR
EVVYKNNDIRLELSRLARIDDPKMKLQGDIVFKCENVPTLDPINFETPDSFLALPKWNTK
RVGSISFDFRTTEPNGLILFTQGRPQDRRDAKGQKNNKVDFFAVELLDGALFLLLDMGSG
TIKVKATQTKVNDEAWHHVDIQRDGRSGIISVNSHRTPFTASGENEILDLEGDLYLGGLP
YNRAGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQIAQSQNITDIKFSCSKVSGKH
CDSSPCKNNGACREGWNRFVCDCTGTGFWDSTCERESSILSFDGTMYMKVVMPNVMHTEA
EDVSLRFMSQRAFGLLMAASSRESADTLRLELDGGRVKLTVNLDCVRINCNTSKGPEVLY
AGEKLNDNEWHSVRVVRRGKNFKLIVDEDMAEGQMAGDHTRLEFNNVETGILTEKRFVSS
APSPFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKASYLGLAT
LQAYTTMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSD
SPLNDNQWHNVVITRDASNTHTLKVDSKSVNQNVNGAKNLDLKGDLFIGGLGPNMYQNLP
KLVVSREGFQGCLATVDLNGRLPDLISDALFRSGQIERGCEVAFTKADLQGPSTTCQEDS
CANMGVCIQQWENFTCDCSMTSYTGTYCNDPGTTYIFGKGGGLITYTWPNNERPSTRADR
LAVGFSTTITDGILVRIDSAPRLADYIMLHIEQGKVGVTFNIGTVDISVKETSTLVNDGK
YHLVRFTRNGGNATLQVDNWPINEHFPSGNSDFERFQMANKKIPFKYTRPVEDWLQEKGR
QLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHPNIKVTGSVRLVGDVP
PSRGATRTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDL
EECDSGHTVDETDGGELVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTIIETTKESLA
MATEAGVPCLSDRGSDDCDGGDGGDDGDDGDDDDGMVISGFGSGEAFDSSLPPTDDEDFY
TTFSLVTDKILTTSAYEGGYKALAPKWEAKDLRPSKASESGRTTPTLAQPNIRGTPPAAV
PSDTPPKLPAGKMNNREVKPPQPDMVLVPLPTSFDMDGTKPRGPFITSPMLRTVPAPLPT
VPGVVRRVPSGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDET
RNYISNSAQTNGAVVKDKAPSSNAKGNASSKRPKDKDKEYYV
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaacagcctgttcaggcgtgttgtcatgctgctaagtacgatgctgggtctg
agcgcaagcttagagtttcccggctcaaaaggtcagtgggctcgctaccagcgttgggac
gccagctccacgagtgacctgaccttccagttcaagacctcagcgtcggagggcctgctg
ctgtacttcgacgacggcggatactgtgacttcctccttctcaccctgtccgaggggaag
cttcagcttcacgtgagcatcgactgcgccgagaccaccatcacctcggccaaaatggtg
aacgacagccgctggcacttcgccgccatcaacagggaaaacttgcggactggcttggcc
gtggacggccagatcaagacgggagaggtgcggcctcagcggcactttatgaaaatcgtc
agcgacctcttcctgggagggcttcccgaggacatccgcatttctgccatcaccctcccg
tctgtctgtgagctaccagcgttcagaggagttatctcagacctcagttatgggagtaaa
ctgcccacgttaatcaacagtcagaaggtacgcttggagatgattggcctttgcacggag
aacccctgtgagaacggcgggatctgctctctggcagatggagaaacctactgtgactgc
tccagaactggatatgtaggtcgatactgcaccgaagcagtcccaagaaaaccaggcctg
gcgcacctgaaggcagaacaaggtagaaacaaagtgagagaagaaaatgtggccacgttc
cgcggctccgagtacttctgctacgacttgtcccagaaccccatccagagcagcagtgac
gaaatcacgctgtcattcaagacctggcaacggaacggcctgctcctccacacgggaaaa
tctgctgactatgtcaacctggcgctgaaagatggggcagtttcccttgtcatcaatctg
ggctctggggcttttgaggccatcgttgagccagtcaacggaaaattcaatgacaactcc
tggcacgacatcaaagtgacacgcaacttgagacagcaatcaggcattggacacgctatg
gtaaacaaactacattgtctggtgacaatctccgtcgatgggatcctcaccacaactggc
tacacccaggaagactacaccatgctgggctctgatgatttcttctatgtgggcgggagc
ccgagcactgcagacctgccgggatctccagtcagcaacaatttcatgggctgcctgcga
gaggtggtgtataagaacaacgacatcaggcttgagctctcccggctcgcccgcatcgac
gacccgaagatgaagcttcaaggcgacattgtcttcaagtgtgaaaacgttcccactctg
gaccccatcaactttgagacgcccgattccttcctggctctgcccaagtggaacaccaaa
cgcgtgggctccatctctttcgacttccgcaccaccgaacccaacgggctgatcctcttc
acccaaggccggcctcaggaccggcgggacgccaaaggccagaagaacaacaaggtggac
ttctttgccgtggagctgctggacggagcgctttttctgctgctggatatgggatctgga
accattaaagtcaaagccacgcagactaaagtcaatgatgaggcgtggcaccatgtggac
atccagagagacggacgctcaggcatcatctcagtaaacagccatcggaccccctttact
gcaagcggagaaaatgagatcttggaccttgaaggagacctttatttgggcggtctgccg
tacaaccgggcgggtttggtgctccccacagagctctggacggctatgctcaactacggt
tatgtgggctgcatccgggatcttttcatcgacggacggagcaagaacatccggcagatc
gctcagtcgcaaaacataactgacatcaagttttcctgtagcaaggtatcgggaaagcat
tgtgacagcagcccctgcaagaacaacggagcgtgtagggagggatggaaccggttcgtg
tgtgattgcactgggacgggcttctgggacagcacctgcgagagagagtcgtccatcctg
tccttcgatggcaccatgtacatgaaggtggtgatgcccaacgtgatgcacactgaggcc
gaggacgtatccttgcggttcatgtcgcagcgggcgttcggcctcctcatggccgcctca
tctcgtgagtcggcagatacgctgcggctggagctggacggcgggcgggtcaagctgacg
gtcaaccttgattgtgtcaggataaactgtaacaccagcaaaggccctgaggttctttat
gcgggagaaaagctcaacgacaatgagtggcactcagtgcgagtggtccgtcgcggtaaa
aacttcaagctcattgtggatgaagacatggctgaaggtcagatggcgggcgatcacacc
cgtctcgagttcaacaacgtggaaacgggcatcttgactgagaaacgttttgtttcttca
gcaccttcaccgtttattggtcaccttcagagcctcaaattcaacggcatgcagtacatt
gacatgtgcaaaaacggggacatcgatttctgcgagctgaacgcccgcttcggcatgcgc
ttcatcatcgcagaccccgtcacctttaagacgaaggccagctacctgggcctggccacg
ctgcaggcgtacaccaccatgcacctgttcttccagttcaaaaccacctcgcccgacggc
ttcatcctcttcaacagcggagacgggaacgacttcatcgccgtggagctggtcaaaggg
ttcattcactatgtgttcgacttggggaacgggcccagtctgctgaaagggaacagcgac
agtcctctgaacgacaaccagtggcacaatgttgtcatcacaagagatgcttccaacaca
cacacactcaaagtggattccaagtcagtcaaccaaaatgtcaacggagccaagaacctg
gacctcaaaggtgacctgttcattggaggtttgggacccaacatgtatcagaatctcccc
aagctggtggtttctcgagaaggcttccagggctgcttggccactgtggatctgaacggc
cgcctgcccgacctgatcagcgacgcccttttccgcagcgggcagatcgagcgtggctgt
gaagtggctttcaccaaagccgacctgcaaggtccgagcaccacctgccaggaggactcg
tgtgccaacatgggcgtgtgcattcagcagtgggagaacttcacctgcgactgctccatg
acctcctacacggggacctactgcaatgaccctggcaccacctacatcttcggcaaagga
gggggtctgatcacgtacacgtggcccaacaacgagaggccgagcaccagggcggaccgg
ctggcggtgggcttcagcaccaccatcaccgacggcatcctggttcgcatcgacagtgcc
ccacgcctggcggattacatcatgctccacatcgaacaaggaaaggtgggcgtgacgttc
aacatcgggacggtggacatcagcgtcaaggagacgtccactctggtcaacgatggcaaa
taccatttagtgagattcaccaggaatggaggcaacgccaccttgcaagtggacaactgg
ccaatcaacgagcacttcccctcaggcaacagcgactttgagcgctttcaaatggcaaat
aagaaaatcccgttcaaatatacccggccagtagaggattggcttcaggagaaaggacgg
cagctgacaatcttcaacacccaggccaccatctccatcggtggaaacgaccggaagcgg
ccctaccagggccagctctccggcctctactataacggcctgaaggtcctcaacatggcg
gccgagggccaccccaacatcaaggtgaccggcagcgtgcggctggtgggcgacgtgccg
cccagccggggcgccacgcgcaccaccacgtccgtgccgccggagatgtccaccaccttc
attgagaccacgaccaccctgtctacgacgaccacgcggaaacagagatcgccacctact
attcagacaacagatgacattgtttcctcagcagagtgttccagcgacgacgaggacctg
gaggagtgcgactccggacacacagttgacgaaacggatggaggggaactagtcatcccc
gtgctagtcgaggaccccatagacatcccttctgtctccacccgttcacccttcatcccc
ctccccccaaccctccgccctgtcctcaccattattgagaccaccaaagaatccttggcc
atggccactgaggcgggggtaccttgcttgtcggaccgaggcagcgatgattgtgatggt
ggtgatggtggtgatgatggtgatgatggtgatgatgatgatggcatggtgatttcgggg
tttggctctggcgaagctttcgactctagcctgcccccgactgacgatgaagatttttac
accaccttctccctggtaacagataaaatcttgaccacatcggcctatgaaggcggctac
aaagctctcgcacccaagtgggaggccaaggacttgaggcctagcaaagcctcagagtca
ggtaggactacacccaccttggctcagcccaacatccgaggtacgcccccagcggcagtc
ccatcagacacgccacccaagctgcccgcagggaaaatgaataaccgcgaggtaaagccc
ccacagccagacatggtcctggtgcccttgcccacgtcctttgatatggacggcaccaag
ccccggggccccttcatcacctcgcctatgctgcgtaccgtgcctgctcccttgcccacc
gtgcctggcgtggtgcggcgagtgccctcgggggcctcggaggtgatccgggagtccagc
agcaccacgggcatggtggtaggcatcgtctcagctgccgccctttgcattctcattctc
ctctatgccatgtacaagtacaggaacagggatgagggttcctatcaggtggacgaaacg
cgcaattacatcagcaactcggcgcaaaccaatggcgctgtggtgaaagataaagcgccc
agcagcaacgccaaaggcaatgccagtagcaagagaccgaaagacaaggacaaggaatat
tatgtatag
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integrated database retrieval system