Oryzias melastigma (Indian medaka): 112157642
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Entry
112157642 CDS
T07439
Symbol
gspt1l
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112157642 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112157642 (gspt1l)
03012 Translation factors [BR:
oml03012
]
112157642 (gspt1l)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112157642 (gspt1l)
Translation factors [BR:
oml03012
]
Eukaryotic type
Release factors
112157642 (gspt1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
112157642
NCBI-ProteinID:
XP_024146266
Ensembl:
ENSOMEG00000002739
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All DBs
Position
LG8:complement(23647610..23668198)
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AA seq
573 aa
AA seq
DB search
MEPRDTAPDSWEQEDDEAVMERQLRPGSNTLNVNAKPFVPNVNAAEFVPVSLKTDSGELE
SVVADKLSSLKVSRSSGPVENGEADVTTEETWDEKEVETSEEEPGGGDDGPEEVPTVDDE
PPETLEEEEEISVPKIPPIQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL
EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHKSFV
PNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPT
VNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDLCPWYTGLPFIP
HLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHVVEVLSL
LSDDVETEDAGPGENLKLRLKGIEEEEILPGFILCNGESLCHSGRTFDAQIVIIEHKSII
CPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKMRPRFVKQDQVCIARLRTAGTICLE
TFKEFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgagacactgccccggattcatgggagcaagaagacgacgaggccgtgatg
gagcggcagctccgacccgggtccaacacgctgaacgtcaacgcgaagccgttcgtgccc
aacgtcaacgccgccgagtttgttccagtgtccttgaaaacggattcgggagaactggag
tccgtcgttgctgacaaactttccagcctgaaggtttcacgaagctctgggcctgtggag
aatggtgaagcagacgtgactacagaagagacctgggatgagaaagaagtagaaacgagt
gaagaagagccaggaggcggggacgatggtccggaggaggtaccaacagtggacgacgag
ccaccagaaacccttgaggaggaggaagaaatttcagtgcctaaaatcccccccattcaa
ccagatgctccaaagaaagagcacatcaacgttgtgtttatcggacacgtagatgctgga
aaatccaccatcgggggacagatcatgtacctgacggggatggtggacaaaaggactctg
gagaagtatgaaagagaagcaaaggagaagaaccgagagacctggtatctgtcctgggca
ttagacaccaaccaggaggagagggacaaaggcaaaacggtggaggtggggcgagcctac
ttcgagacggataaaaagcactttactatcctggatgctcctggtcacaaaagctttgtt
cccaacatgattggaggggcatcgcaggcagacctggctgtcctggtaatctctgctaga
aaaggcgagtttgagactggttttgagaaaggtgggcagacacgagagcatgccatgctg
gctaaaacggctggagtcaaacacctgattgttctggtcaacaagatggatgacccaaca
gtcaactggagcttggagaggtatgaagagtgtaaagaaaaactggtgccattcctaaag
aaagtgggcttcaacccaaagaaggacatccacttcatgccatgttctgggctgacgggg
gccaacctgaaggagcccacagacctgtgcccctggtacacaggtctaccattcattcca
cacctggacagtctcccaaacttcaatagatccagtgacggcccggtcagattgcccatt
gtagataaatacaaggacatgggcactgtcattttgggaaagctggagtcaggctcaatc
agcaaagcgcaacagctagtgatgatgccgaaccggcacgttgtagaggtgctgagtctg
ctgtctgatgatgtggaaacggaagatgctgggcctggagagaacctcaagctccgcctg
aagggtatcgaggaggaggagattctacccggcttcatcctatgcaacggggagagcctg
tgccattcgggacgcacttttgatgctcagattgttatcattgagcataaatccatcatc
tgtccagggtacaacgctgttcttcacattcatacctgcattgaggaagtgcagataacg
gccttaatctgcctggtggacaagaagagtggcgagaagagcaagatgaggccacgcttc
gtcaagcaggaccaggtgtgcattgcacgtttgcgcacagcaggaaccatctgcctggag
acctttaaggagtttccacagatggggcggttcaccttacgggatgaaggtaagaccatc
gccatcggcaaagttctgaagctggttgcagagcgggactga
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