KEGG   Oryzias melastigma (Indian medaka): 112157748
Entry
112157748         CDS       T07439                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112157748
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112157748
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_HPS5 McrBC
Other DBs
NCBI-GeneID: 112157748
NCBI-ProteinID: XP_024146477
LinkDB
Position
LG24:2547435..2581309
AA seq 1871 aa
MEAASSWWINSDSYRAATETQHAGSGAALPNNTKMASDSTHIAQLTSELYFLIARFLEAG
PCQKAAETLIREVEEKELLPRRLDWAGQEHPGTYDNLVKLYRHIAADHLLQVCCRVCPLL
EKEVPASVPGLTSLLGAGRQYLLRTSKSCKHVIWKGSALAALHCGRPPEPPVIYGSPPNI
VETSFSRGLNGSYRLRQLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCL
VKIWGTDDGRLLATLRGHAAEISDMTVSYENTMIAAGSCDKTIRVWCLQTCAPLAVLEGH
AASITSLQFSPLCSGSKRYLSSTGADGTICFWQWDARSLKFGQRPSKFTERSRPGVQMIC
SSFSAGGMFLATGSTDHIIRVYYFGSGQPEKISELESHTDKVDSIQFSHCSDRFVSGSRD
GTARIWQLQPQGWKSILLDMQTKLPGKYNPPPLEDKVTKLKVTMVAWDRNDGTVITAANN
LTLKVWNSITGNLVHVLMGHEDEVFVLEPHPFDPRILFSAGHDGNCIVWDLARGAKIRSY
FNMIEGQGHGALFDCKCSPDGQHFAATDSHGHLLIFGFGSSSKYDKIADQMFFHTDYRPL
IRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPPRYQRLVPGREGCRDEQLIPQMGVTS
SGLNQVVSEQAVDGPSPLDTMIQRLQQEQDQRRGMNDASAAASATTNRAGRGSVGSPTEV
HSPPNVGLRRSGQIEGVRQMHSNAPRSQMATEGDLVAWSRRVLVPELEDALIRRQVNWRE
AKGEEEINVYQSERRRRTIHSLPKESRVHPTSECVVDEARRSQGNHGYQTRAAAEETSRQ
SAEAVDDDDSASEVQTVMGDVEVRQVNGHSSEEEKEEEEKEPWPDDHSSSSDYSSDYSDW
TADAGINLEPPKKSVKVKKKSSGSEEDGEKKREGKKEKKKDKTDKDSAIPKKKQPKEKRK
RAELQEQGLTLEEWLPSAWITDTEPRRCPYIPQMGDEVYYFRQGHEAYVEMAKQKKIYSI
NPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFLDPDTGRLTGGSFSMKYHDMP
DVIDFLVLRQQFDNTKRRQWSIGDRFRSVIDDAWWFGTIESQEPYQTQYPDSLFQSYNVC
WDNGDTEKMSPWDMEPIPDDAPPAATFPDELGTSVPLTEEEQKDLLYVPLEGEWGCRTRE
DECERIIKAIDQLCTLDVAAPFAFPVDLQAYPTYCTVVAYITDLSTIRSRLVNRFYRRIS
SLMWEVRYIEHNAQTFNEPGSFIVTTAKFVSDLMLAFIKDQNLTDLMPLYKTMKKATFSD
SEDEDDEDEDEDINTPGTSTRNHKSRGPLQRQLRTRPPSYDPHAWKGRCKELLDLIFQCE
DSEPFREPVDLQEYPDYLQIVDSPMDFGTVLSNLTEGKYKSPIELCKDVRLIFSNSKAYT
PSKKSRIYSMSLRLSALFEEHVSSILDDYKAIHGLTNRLTRQGSDKQRRHAADRQTRHAM
KRRRRRSDSPTSSNASSPERKRRVSSRVNGKREPTPPPPRPPFLRQSVTPKQPPQLVNGK
AEAGTPGRTRSAARHLSHSSPSSENITNSTPNPPESSRLLRAHNSSSASAPTAPEKVAPS
PPAESSSGSTRRKLRTPVRHTPASPSSPPPQSKVHLNGHSSHVTLGVGRRGRKSRTESPV
SPPEIPAPASPSRPRGRPPGKKRGRKSKQELEEMTKGGNRRSSTPDEELNHSTGDEGETS
PARDTPAPSESGATPRRRGRPRAVRTEESAPPAESPEPSPLRRSSRRANEEVTPPQSSNQ
KEPPKEEAGETAVGSMRTRNQGRRSAWYMEEDSEEEQRQLLFEDSSITFGTSSKGRVRKL
TEKAKANLIGW
NT seq 5616 nt   +upstreamnt  +downstreamnt
atggaggcagcctcttcctggtggataaacagtgacagctacagggcagccaccgagacc
cagcacgcaggctccggcgctgccctgccgaacaacaccaaaatggcttcagacagtaca
cacatcgcgcagttgacttctgaactctacttcctaatagcccggtttctagaagctgga
ccgtgtcagaaagcggccgagaccctgatcagggaggtggaggagaaggagctgctgccc
agaaggctggactgggcaggacaggaacaccccggcacctacgacaatttggtgaagctc
tacagacacatcgccgcggatcacctgctgcaggtgtgctgcagagtatgtccgctgctg
gagaaggaggtcccagccagcgtcccgggcctcaccagcctgctgggagccggccgacag
tacctgctccgcaccagcaagagttgcaaacacgtcatatggaagggttcggcgctggcg
gcgctgcactgcggaaggccaccggagccccccgttatttatgggagcccgcctaatatt
gtggagacgagcttcagccgggggctgaacggctcctaccgtctgcggcagctggtgccc
accgccgtgtaccaacacatgaagatgcacaagaggatcctgggacatctgtcgtccgtg
tactgcgtcaccttcgaccggacggggcgccgcatcttcaccggctccgacgactgcctg
gtaaagatctggggaacggacgacggccgtctgctggcgaccctccgcggtcacgcggca
gagatctccgacatgaccgtgagctacgagaacaccatgatcgccgccggctcctgtgac
aaaaccatccgagtgtggtgcctacaaacctgcgcccctctggcggtgttggaaggtcac
gccgcctccatcacgtcgctgcagttttctcctctctgcagcggctccaaacgctacctg
tcctccaccggcgccgacggcaccatctgcttctggcagtgggacgctcgctcgctcaaa
tttggccagaggcccagtaagttcacggagcgctccagacccggcgtccagatgatctgc
tcctccttcagtgcagggggaatgtttctggctaccggaagcaccgaccacatcattcgg
gtttactattttggatcgggtcaaccagagaagatctctgaactggagtcccacaccgac
aaggttgacagcatccagttttcacactgcagcgatcggtttgtgagcggcagcagagac
ggaacggctcggatctggcagctgcagcctcagggctggaagagcatcctgctggacatg
cagaccaaactacccgggaagtacaatcctcctcctctggaagacaaagtcaccaagctg
aaggtcaccatggtggcgtgggatcgcaacgacggcacggtgatcacagcagccaacaac
ctgacgctgaaggtgtggaactccatcaccgggaacctggtccacgtcctgatgggtcac
gaggatgaggtgtttgtcctggagccgcatccttttgatcccaggatcctgttctcagcc
gggcatgatgggaattgcattgtgtgggatctggcccgaggagccaaaatccgctcctat
ttcaacatgatcgagggtcaaggtcacggagctctgttcgactgcaaatgtagtccggac
gggcagcacttcgccgccaccgactcccacggtcacctgctcatcttcggcttcggctcc
agcagcaagtacgataagatagcggaccagatgttcttccacaccgactaccgcccgctt
atccgcgacgccaacaactacgtgctggacgagcagacgcagcaggccccgcacctgatg
ccgccgcccttcctggtggacgtggacgggaacccccacccccccaggtatcagcggctg
gtgcccggcagggagggctgcagggacgagcagctgattcctcagatgggagtcacttcc
tccggtctgaaccaggtggtgagcgagcaggcggtggacggccccagtcctctggacacc
atgatccagcggctgcagcaggagcaggaccagaggcggggcatgaacgacgcgtctgct
gcagcgtctgcaaccaccaaccgggccggcagaggatcagtgggatctcccacggaggtt
cactccccgccaaacgtgggtctgcgccgcagcggtcagatcgagggcgtccggcagatg
cacagcaacgcccctcgcagccagatggccacagagggggacctggtggcctggagccgc
cgggtgctggtccctgagctggaggacgccctgatcaggaggcaggtgaactggcgtgag
gctaaaggggaggaggagatcaatgtttatcagtcggaacggaggagacgcaccatccac
tccctccccaaggagagcagagttcacccgacgtcagagtgcgtcgtggacgaggccaga
aggagccaggggaaccacggctatcagacccgagctgccgccgaggagacgagccgccag
agcgccgaggcggtggacgatgacgacagcgcctcggaggtacagacggtcatgggagac
gtggaggtgcggcaagtcaacggtcactcctcagaggaggagaaggaggaggaggagaag
gagccctggccagacgaccacagcagttcaagcgactactccagcgattactccgactgg
acggcagacgcagggatcaacctggagccgcccaagaagagcgtgaaggtgaagaagaag
agcagcggctccgaggaggatggagagaagaagagggaggggaagaaggagaaaaagaag
gacaaaacagacaaagacagcgccataccaaagaagaagcagccaaaggagaagaggaag
agggcggagcttcaggaacaagggctgactctggaggagtggcttccctccgcttggatc
acagacacggagccgcggaggtgtccgtacatcccccagatgggagatgaggtgtactac
ttccggcagggccacgaggcctacgtggaaatggccaaacagaaaaaaatttacagcatc
aatcctaagaaacaaccgtggcataagatggagctgcgggagcaggagctgatgaagatc
gtcggcatcaaatacgaggtgggtctgcccacgctgtgctgtctgaagttggcgtttctg
gatccggacaccgggaggctcaccggaggatccttctctatgaagtaccacgacatgccc
gatgtcatcgacttcctggtgttgcggcagcagtttgacaacaccaagaggaggcagtgg
agcatcggcgacaggtttcggtcggtgatcgatgacgcctggtggttcgggaccatcgag
agccaggagccttaccagacccagtatccagacagcttgttccagagctacaatgtctgc
tgggataacggagacacggaaaagatgagtccgtgggacatggagcccatccccgatgat
gcaccccctgcagccacgttcccagacgagctgggcaccagcgtcccgctgacggaggag
gagcagaaggacctgctgtacgtcccgctggagggggagtggggctgccggacgcgggaa
gacgagtgcgagcgcatcatcaaggccatcgaccagctctgcactctggacgtggcggca
ccgttcgcttttccagtggacctccaggcgtacccgacctactgcaccgtcgtggcttac
atcaccgacctcagcaccatccgcagtcggctggtcaaccgcttctacagacgaatctcc
tcgctgatgtgggaggtccggtacatagaacacaacgcccagacgttcaacgaaccggga
tcctttatcgtcaccaccgccaagtttgtctcagacctcatgttggcgttcatcaaggac
caaaacctgacggacctcatgcctctgtacaaaaccatgaagaaggccaccttctcagac
tctgaagatgaggacgatgaagatgaggatgaggatatcaatactccaggaacatcgact
agaaatcacaagagccgtggacctttgcagcggcagctgagaacgcgcccgccctcgtac
gaccctcacgcctggaaggggcgctgcaaagagctgctggacctcatttttcagtgtgaa
gactctgaaccgttcagagaaccggtggatctgcaggagtacccggactacctgcaaatc
gtggactcccccatggactttggcaccgttcttagtaatctgacagaggggaagtacaag
tctcccattgaactctgcaaagacgtgcggctcatttttagtaattccaaagcttacact
cccagcaagaagtcccggatttacagcatgagtctgaggctttctgccctgtttgaggag
cacgtcagctccatcctggatgactataaagccattcacggtttgaccaacagactgacc
cgacagggctcggacaaacagaggcgacacgccgcggacagacaaacgcggcacgccatg
aagaggaggaggaggcggagcgactccccaaccagcagcaatgcatccagtccagagagg
aaaagacgtgtatcgtcccgtgtgaatggaaagagagagccgacgccgcctccgccacgg
ccgccgttcctgaggcagagcgtcactcccaaacagccgccccagctggtcaacgggaaa
gcagaggcgggaactccagggcggactcggagcgctgcgcggcatttatcacactcctcg
ccttcatcagaaaacatcacaaacagcaccccgaacccaccagagtcgtctcgtttgctg
cgagctcataactcctcctcagcgtctgcaccaaccgcccccgagaaggtggcgccctcg
ccccccgcagagagcagcagtggcagcacccgtcggaaactgcggacgcccgtgcgacac
acgcccgcatcgcccagcagccccccgcctcaaagcaaggtccatctgaacggccacagc
agccacgtgactcttggcgttggcagaagggggcgcaagtccaggacggagtctcctgtg
agtcctccggagatcccagctccggcgagtccttcgagaccccgcggtcgccccccgggg
aagaagagaggccgaaagagcaagcaggagctagaggagatgacgaagggcggcaaccga
cggagctcgactcctgatgaggagctcaaccattccacgggcgacgaaggagaaacgtcg
cccgcgcgggatacgccagcgccgtcggaaagtggcgcgacgccaagaagacgaggtcgg
ccccgagctgtcagaactgaggaatcggctcctcctgccgaatcgcccgagccgtcaccg
ctgaggagaagcagcaggagagccaacgaggaggtcacgccccctcaaagctccaatcag
aaggagcctccgaaggaggaggcgggagagacggcagtagggtccatgcgcacgcgcaac
cagggacggcggtcggcgtggtacatggaggaggactccgaggaggagcagaggcagctg
ctgttcgaggactcctcgataacctttggcacctcctcaaaggggcgtgtccgcaaactg
acagagaaggccaaagccaaccttataggctggtag

DBGET integrated database retrieval system