Oryzias melastigma (Indian medaka): 112157768
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Entry
112157768 CDS
T07439
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112157768 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112157768 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112157768 (farsa)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
112157768 (farsa)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class II (U)
112157768 (farsa)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112157768 (farsa)
Prokaryotic type
112157768 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
HTH_11
HTH_47
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
112157768
NCBI-ProteinID:
XP_024146526
Ensembl:
ENSOMEG00000017367
LinkDB
All DBs
Position
LG23:complement(4890973..4903638)
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AA seq
548 aa
AA seq
DB search
MPGPIKKSVSLIFVSIIVVSCFPCKKNGSTLQHYKVSGRATSFPFSVKPRIPIMADAGSV
EALLQLVEKADGGVDSLDVASRIGVDHQVIVGAVKSLQSLGDVISAEQRSSKHWELTEEG
TELAEQGSHEARVFSSIPPEGLPQSELMKLSFGKIGFSKAMSNKWIRVDKSHEGGPRIFT
SVESIQDQVREKLLLVQRGAALEEKDKNELKKRKLLAEVTVKSYWITRGSSFSTTLTKQE
TELTAEMIATGSWKDRKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGFSEMPTN
NFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHDFPQDYLERVKRVHSEGGYGSQG
YKYDWKMEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNETLDATHLAE
FHQIEGVVADYGLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVFSYHEGLKKW
VEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYD
SPICRLDS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaccaataaaaaaaagtgtttctttaatttttgtgagcatcatagttgtatcc
tgttttccgtgtaagaagaatggatcaacattgcaacattacaaagtttccgggcgtgct
acgtcatttccgttctctgtcaagccccgcattcccatcatggcggacgccggatcggtg
gaggcgcttctgcagcttgttgagaaggcggacggcggcgtggacagcctggatgtagcg
agcagaatcggggtagaccaccaagtcatcgtcggagccgtgaagagtcttcagtcgctc
ggagacgttatttcagccgagcagcgctcctccaagcactgggagctgaccgaagagggc
acggagttagccgagcagggcagccatgaagcccgggtgttcagctccatccccccggag
ggtctgccgcagagcgagctcatgaaactgtccttcgggaagatcggcttcagcaaggcc
atgtccaacaagtggatccgggtggacaagtcccacgagggggggcccaggatcttcaca
agtgtggagagcattcaggaccaggtgagggagaagctgctgctggtgcagagaggagcg
gcgctggaggagaaggacaagaatgagctgaagaagaggaagctgctcgctgaggtcaca
gtgaagtcttattggatcaccagaggaagctccttcagcaccaccctgaccaaacaggag
acggagctcaccgctgagatgattgccacaggcagctggaaggaccgaaagtttaaaccc
tacaactttgaggccatgggcgtggctccagactgcggtcacctgcacccgctgatgaag
gtgcggacacagttcaggcagatcttcctggagatggggtttagtgagatgcccacaaat
aacttcatagaaagctccttctggaactttgactcgctgttccagccgcagcagcacccc
gcccgagaccagcacgacaccttcttcctgtcagatccggcgctcgcccacgacttcccc
caggactacctggagagggtgaagagggtccactcagaggggggctacgggtctcaaggg
tacaaatatgactggaagatggaagaggctcagaagaacatcctccgcactcacactaca
gctgtcagcgcacgcatgctctataagctcgcacagcaggagaagttcactccggtgaag
tatttctccatcgatcgggtcttcaggaacgagacgttggacgccacccacctggcagag
ttccaccagatcgagggggtggtggccgactacgggctgacgctgggcgacctcatgggc
gtcctgcaccagttcttcaccaaactaggaatcactaagctgcgcttcaaacctgcatat
aatccgtacacagagcccagcatggaggtgttcagctaccatgaagggctgaagaagtgg
gtggaggtgggaaactccggcgtcttcaggccggagatgctgctgcccatggggctgccg
gaggacgtgtcggtgatcgcctggggcttgtctctggagagacccaccatgatcaaatac
ggcatcaacaacatcagggagctggtgggacacaaggtcaacctgcagatggtctatgac
agccccatatgtcggctggactcctga
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