KEGG   Oryzias melastigma (Indian medaka): 112157874
Entry
112157874         CDS       T07439                                 
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112157874 (stxbp5a)
Membrane trafficking [BR:oml04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    112157874 (stxbp5a)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    112157874 (stxbp5a)
SSDB
Motif
Pfam: LLGL WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 ANAPC4_WD40 WD40 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Lgl_C EIF3I Beta-prop_Vps41 Beta-prop_EML Beta-prop_NUP159_NUP214 Synaptobrevin CFAP43_N VPS8_N Beta-prop_VPS8 WD40_like
Other DBs
NCBI-GeneID: 112157874
NCBI-ProteinID: XP_024146708
Ensembl: ENSOMEG00000009194
UniProt: A0A3B3BRW6
LinkDB
Position
LG24:complement(8865951..8996783)
AA seq 1138 aa
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLFHETLQSDHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFSRERITFCHLPFQSKWLYIGTERGNVHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYAHDEAIHSVA
WHHEGKQFICSHSDGTLTTWNVRGQGRPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
TGEPFIIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPVSGGNWGQGTLSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIVYRFSKLEVTTEVVQLLE
VRMQSELNETDSPDGGGEPTSAHHTPGASPHTSGPPSQPSTSSNNSDGGNMPCLKVRSTP
LKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGVAVVDYIQKTVVLNL
GTVELYGSNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSVLMSNTNLHQFY
NGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKEAR
EAISFFHFCETFARKGDSTLTPCLFVGTSLGTVLVLVLTLPPAGEQRQLQPVIISPVGML
VRLKGSVLRMAFLDSSGSLLPPSYDPWYEPNVTTDGEEKVPKRRPVSVSPSTSQELSESQ
YTVVCSEKQAKVISLPSQTCIYKHNITETSFILRADVVQMSQGVCVACFCANGHIKTLSL
PGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQETCENLQEMLGEL
FTPVETPEAPNRGFFKGLFGGGAQSLDREELFGELAAGKASRSLAQHIPGPGGIEGMKGA
ASGVVGDLARARIALDERGQKLGELEERTAAMMASADSFSKHAHEMMLKCKDKKWYQF
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgaagaagtttaacatcaggaaggtgttggacgggctgaaggaggtgtcgtcttccacg
ccgtcggtccaagtggggccacaggagaaccatctgttccacgagacgctccagtccgac
catttccagctctgcaagaccgtccgtcatggcttcccctaccagccttcgtccatggcg
tttgaccctgtgcagaagattctggccatcggcacccagagtggagctctccggctgttt
ggccgtcccggcgtggagtgttactgtcagcacgagagcggcgccgccgtcattcagcta
cagttcctcatcaatgagggggcgctggtgagcgcgttggctgacgacagcgtccacctg
tggaacctgaggcagaagagaccagctatcctccactccctgaagttcagcagagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgaggg
aacgtccacattgtcaacgtggagtccttcatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcttcaaaagctcatcctggaccggttgtccacataagtgataac
cctatggatgaggggaagcttataattggatttgagtctgggatcgtggtcctttgggat
ctgaaatcaaagaaggcagactatcgctacgctcacgatgaggcgatccactcagttgcc
tggcaccatgagggcaaacagttcatctgcagccactctgatggaaccctgaccacgtgg
aacgtgagaggccagggccggcccatacagacaatcacaccgcatggaaaacagcccaag
gatgggaagaagccagagccatgtaaacccattcttaaagtggaatataaaacgactagg
actggggagcccttcataatcttctctggtggtctgtcttatgatactgttggccgacgg
ccttgtctgacagtaatgcacgggaagagcactgcggtcctggagatggactaccccata
gtagacttcctcacactatgtgagacgccgtatcctaatgattttcaggagccttacgct
gtggtggtccttctagaaaaagatttagtggtgatcgaccttgcacaaaatgggtacccc
atatttgaaaacccatatccgctgacgatccacgagtctcctgtgacgtgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgtcggctcgcgacagaaa
cgacagggatacagcaaaaaggaatggcctgttagtggtggaaactggggtcaaggcaca
ctaagttacccagagatcatcataaccgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaggtgctttataagctaaaaacagcgaaggtatttgacagg
aaccgctccaaagaagacaagggcagcaccgaggtgtcagacgaggatccttttgccatt
cagattatggcttggtgtcctgaaagccggatgctttgtgtcgccggggtgtcagccaac
gttatcgtctaccgcttcagcaagctggaagtaaccaccgaggtggtgcagctactagag
gtgcgaatgcagtctgagctgaacgaaacagactctccagatggcggcggcgagccaaca
tcagcacatcatacccctggtgccagccctcacacaagcggcccgccttcacagccttcc
accagcagcaacaactctgatggaggcaacatgccctgcctcaaagtgcgcagcactcct
ttgaagcagtctgcaggttaccaggtagatttggtggtccagttagtgtgggtgagtgga
gagcctcctcaacagatcacaagtctggcgctcaattcctcctacggcctagtggtgttt
ggcaacagcaacggtgtggcagtcgtggattacatccaaaagacggtggtcctcaatttg
ggaacggtcgagctttacggctccaacgacccctaccagagacagcctcggtcgcccaga
aagtcacgacagccttcaggaggtctatgcgatatcaacgagggctctgccacttcagag
gatcgctgcaagtctcctacttcagtgttgatgtcaaacaccaatctacatcagttctac
aatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctactgagctaaag
ccagacttggtcctcctgtccgtatgcccgccgcggggtgccaacccattagaccaccgg
gacaactccttcagccgctcgcgctcctccagcgtcaccagcatcgacaaggaagctcgg
gaggccatcagcttcttccacttctgcgagacatttgcccggaaaggggattccactttg
accccctgtctgtttgtgggcacctccctgggaactgttctggtcctggtgctcacatta
ccacctgctggggagcagcggcaactgcaaccggttatcatttcacctgtaggaatgttg
gtgcggctgaagggaagtgttttacggatggctttcttggattcctctggctctctgctg
cccccttcctatgatccttggtacgaacccaacgttaccacggatggcgaggaaaaggtc
cccaagcgccggcctgtgtccgtgtctccctccacctcccaggaacttagtgagagccag
tatactgtggtgtgctcagaaaaacaggccaaagtcatttccctgccctcccagacgtgc
atctacaaacacaacatcacagagacatccttcatcttacgggcagatgtggtgcagatg
agccaaggagtgtgcgtggcttgtttttgtgccaacggccacatcaagaccctcagtttg
cctggactgagaccactcatggatgtaaactacctaccgctgacagatatgcgaatagcc
agaacattctgcttcaccaacctgggccaggccatgtacctgtgctccccaactgagatc
cagaggatcacctacagtcaggaaacctgtgaaaacctgcaggagatgctgggtgaactt
tttacccccgtggagacaccagaggcaccaaatagaggtttcttcaaaggtctctttgga
ggaggagcacaatcgctggacagagaagaactttttggcgaattagctgctggaaaggca
tctcgaagtctggcccagcacatccctggcccaggtggcatcgagggcatgaagggggct
gcctcgggggtggttggagacctggcacgggcccggatagcgctggatgagaggggccag
aaactgggggaactggaggagaggacggctgccatgatggcaagcgcagactctttttcc
aaacacgcccatgagatgatgctgaagtgcaaagataaaaagtggtaccagttctga

DBGET integrated database retrieval system