Oryzias melastigma (Indian medaka): 112157897
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Entry
112157897 CDS
T07439
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112157897 (med23)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112157897 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DUF7206
Motif
Other DBs
NCBI-GeneID:
112157897
NCBI-ProteinID:
XP_036066385
Ensembl:
ENSOMEG00000019223
LinkDB
All DBs
Position
LG24:complement(16867843..16997192)
Genome browser
AA seq
1541 aa
AA seq
DB search
MLSAEPLLEYGRVFNEWWCCRELQNMVECEHWIDKLVWAFSSNCLEQLWEESDITHLHRA
AFLRLIAASAGSYCPEAAPRDCSAGRHGFPESRELTCAEQPDGLHSKAHTFIKHQVERCK
VLRREGKLRHAEKCFSSRQDALNHKGLHSNKTETIEEAFAGMFMDTPEDERTKLISCLGA
FRQYWGTLPQDSHEQCVQWIVRFIHTQRSPKRISFLYDCLAMAVETSLLPPRMVCVALIS
SDSLEWERTQLWALTFKLIRKIIGGVDYKGVRDLLKGVLDKIQTIPITVSSAILQQLLAA
REVVEYILDRNACLLPAYFAVTEIRKLYPEGQLSHWVLGSLISDFVDSFRPTARINSICG
RCSLLPVVNNSGAICNSWKLDPATLRFPLRGMLPYDKDLFEPQTVLLRYVLEQPYSREMV
CNMLGLNKQTLNIAQQKQRCPVLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLS
SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPV
MKLFDLLYPEKECIPVPDINKPQSTHSFAMTCIWIHLNRKAQSDNSKLQIPIPHSLKLHH
EFLQQSLRNKTLGMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNTSVRTSLPGTNCT
ASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYME
IESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQ
TNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARAT
HVTDFFTGSDSIHGTWCKDILHTIMSFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFN
LKKNVEEEYRKWKSMAIENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIG
ARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHE
GNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENSPEHWLQSDWHSKHMNYHKKYPEKLYFE
GLADQVNPPMQHQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY
KFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWGLSETYMKCGMNA
REDNVWIPDDTYYCKLIGRLVDTMAGKTPGPFPNCDWRFNEFPNPAAHALHVTCVELMAL
AVPGKDVGNALLNVVLKSQPLVPRESITAWMNAIGLVITALPEPYWVVLHDRIVSVISSP
ALTSETDWVGYPFALLDFTACHQSYSEMNCSYVLALAHAVWHHSSIGQLSLTPKFLSEVL
KPIVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQNCQHLSYMDPIC
DFLYHIKYMYTGDSVKEQVEKIIMTLRPAMKLRLRFITHSSMIETSSVAAAAAAAIAAST
SSSSSSSSCGNPQPAPSLSSSSSNNAAASPSTPSQHSHTPM
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgctgagccccttctggaatacggccgtgtgtttaacgaatggtggtgctgt
cgcgagctccaaaacatggtggagtgcgaacactggattgataaacttgtgtgggcattc
agctccaactgtctggaacagttatgggaggaaagtgacattactcacttgcacagagca
gcatttctgcgtttaatagctgcctccgccggctcatactgtcctgaagccgctccgaga
gactgttctgccgggagacacggttttccagagtcccgggagctcacttgtgcggagcag
ccggatggactgcattcgaaagcacacaccttcataaaacaccaggtagagagatgcaaa
gtcctccgccgtgagggtaaactgcgtcacgccgagaagtgcttttcttcacgtcaggac
gctctgaaccataaaggtttacattcaaataaaactgagacgatagaagaagcgtttgct
gggatgttcatggacactccagaggatgagagaactaaactcatcagttgtcttggagcc
ttccgacagtactggggaactctgccacaggattctcatgagcagtgtgttcaatggatt
gtgcgcttcatacacacacagcgcagtcccaaaagaatctccttcttgtatgattgcctg
gctatggcagtggagacgagtctgttaccccccaggatggtgtgtgtggcgctgatcagt
tcagacagcttggagtgggaaagaacgcagttgtgggccttaaccttcaagctcatccgc
aaaataatcggaggggtggactacaagggggtacgcgatctgttgaaaggtgttctggat
aaaattcagacgatccccatcactgtcagctctgctattctccagcagctgctggccgcc
agggaggtggtggagtacatcttggacaggaacgcctgcctcctcccagcatactttgct
gtgacagaaataagaaaactgtacccagaagggcagctctcccattgggttttgggcagt
ttaatatccgactttgtggatagtttcagacctacggcgagaatcaactcaatctgtgga
cgatgcagtttgctgccggttgtaaataacagcggggccatctgtaattcctggaaatta
gacccagccactctgcggttccccctcaggggcatgctgccctacgacaaggacctgttt
gagccgcagaccgtcttgctccgctatgtcctcgaacagccgtactcgagggaaatggtg
tgcaacatgttaggactcaacaaacagactctgaacattgcccagcaaaagcagcgctgc
ccggtgctggaggagcagctggtggacctggtggtgtacgccatggagcgctccgagacg
gaggagcactttgacgccgacgtcgggggaaccagtcagctgctgtggcagcatctctcc
tctcagctcatcttcttcgtgctgtttcagtttgcaagcttccctcacatggtgctgtct
ctgcatcagaagcttgcaggtcgaggtcttatcaaagggagagatcacctgatgtgggtg
ctgctgcagttcatctcagggagcattcagaaaaacgctctggccgacttcctcccagtc
atgaagctttttgacctactttacccagaaaaggagtgcattcctgttcctgacatcaac
aagccccagtcgactcactccttcgccatgacctgcatttggatccacctgaaccgcaaa
gctcagagcgacaactccaagctgcagatccccatcccacactctctgaagctgcaccac
gagtttttgcagcagtcgctgcgtaataagaccctcggcatgtccgattataagatcgcc
ctgctatgcaacgcctacagcaccaactccgagtgcttcaccctccccatgggcgtgctg
gtggaaacgatttatggaaacacgtccgtgaggaccagtctgccgggcaccaactgcacg
gcgtcgggatcggtcactccgctgcccatgaatctgctggactccctgacggtgcacgca
aagatgagtctgatccatagcatcgccacacgcgtgatcaaactggcccacgccaagtcc
agcatcgctctggcgccggctctggtggaaacctacagcagactgctggtctacatggag
atcgagtccctgggcatcaaggggttcatcagccagttgttgcccaacgtgttcaagtct
cacgcgtggggaatccttcacacgctgctggagatgttcagctacaggatgcaccacatc
cagccgcactaccgagttcaactgctgagccacctgcacagcctggccgccgtgccccag
accaaccagaaccagctgcacctgtgtgttgagagcaccgctctgcgcctcatcacagct
ttggggagttcggaggtgcagccgcagttcacccgcttcctcaacgacccgaagacggtc
ctgtcggccgagtccgaggagctgaaccgcgccttgatcctcacgctggccagagccact
cacgtcacggattttttcacgggctccgattccatccacggcacttggtgtaaagacatc
ctgcacaccatcatgtccttcacgcctcacaactgggcgtcgcacaccctgtcctgcttc
cccgctccgctgcaggcgttcttcaagcagaacaacgtcccgcaggagtcccgcttcaac
ctgaagaagaacgtggaggaggagtacaggaagtggaagtccatggccatcgagaatgac
atcatcacccacttctccatgcagggctctcctccgctcttcctctgcctgctgtggaag
atgctgctggagacggaccacataaaccagattggcttcagagtcttggagcgcattgga
gctcgtgcactggtggctcacgtgcgcacgtttgccgacttcctcgtctacgagttctcc
acgtcggcgggcggacagcagctcaacaagtgcatcgagatcctcaacgacatggtctgg
aagtacaacatcgtcactttagacaggctcatcctgtgtctggccatgcgcagccacgag
ggaaacgaggctcaggtctgctacttcataatccagctgcttctgctgaagcccaatgac
ttcaggaacagagtcagtgactttgtgaaggagaactccccggagcactggctgcagagc
gactggcacagcaaacacatgaactaccacaagaaataccctgagaagctgtacttcgag
ggccttgcagaccaagtcaacccccccatgcagcaccagccgcaatacctccccatctac
tttggtaacgtgtgcctgcgcttcctgcccgtctttgacatcgtcattcaccgcttcttg
gagcttctccccgtctccaaatcgctagagacgctgctggatcacctgggcggactctac
aaattccacgaccgccctgtgacgtatctctacaacactctccactactatgagcgccat
ctgagggacaggaccaacctgaagaggaagctggtccacgccatcatgtcctcgctgaag
gacaaccgcactccaggatggggtctcagtgagacctacatgaagtgcggcatgaacgcg
agggaggacaacgtctggatccccgatgacacctactactgcaagctgattggccgcctc
gttgacaccatggcaggaaaaactcccggccccttccccaactgtgactggaggttcaac
gagttccccaacccggcggcacatgctctgcacgtcacctgcgtggagctgatggcgttg
gctgtgccgggaaaagacgtcgggaacgctctgctcaatgtcgtcttgaagagtcaacct
ctggttcccagagagagcatcacagcgtggatgaacgccatcggtttggtgatcaccgcg
cttcctgagccttactgggtcgttctccacgaccgcattgtgtctgtgatcagctcccct
gctctgacatcagagacagattgggtgggttatccctttgctttgctggacttcacagcc
tgtcaccaaagctacagcgagatgaactgcagctacgtgctggcactagcccacgccgtc
tggcatcactcatccatcggacagctgtctctgactcccaaattcctgtcggaggtcctg
aagcccatcgtgcagacggagttccagctcctgtacgtgtaccacctcgtggggccgttc
ctgcagcgcttccagcaagagcggactcgatgcatgctggagatcggtgtagctttctat
gagatgctgcaagccgtcgaccaaaactgccagcatctcagctacatggacccaatctgt
gatttcctgtaccacatcaagtacatgtacactggagacagcgtgaaggagcaggtggag
aaaatcatcatgactctgcgtccggccatgaagctgcgcctgcgcttcatcacccacagc
agcatgatcgagacgtcctcggtggcggcggcggcagcagcagccatcgccgcctccaca
tcctcctcctcttcctcctcctcctgtggcaaccctcagcccgctccctctctctcctcc
tcctcctccaacaacgccgctgcctctccctccaccccctcacagcattctcacacgccg
atgtag
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integrated database retrieval system
