Oryzias melastigma (Indian medaka): 112157918
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Entry
112157918 CDS
T07439
Symbol
hnrnpub
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112157918 (hnrnpub)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112157918 (hnrnpub)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112157918 (hnrnpub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
CPT
AAA_17
AAA_22
Motif
Other DBs
NCBI-GeneID:
112157918
NCBI-ProteinID:
XP_024146795
Ensembl:
ENSOMEG00000014951
UniProt:
A0A3B3DM90
LinkDB
All DBs
Position
LG24:complement(13106883..13114981)
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AA seq
797 aa
AA seq
DB search
MSTINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALVGDSSAAQEGAEEEA
FEQAAEQEVMGEEEEGPVEESMEANEEEQAHGDEGNGVADDEDMGEGEEGDEDDEMLKGD
VDDMEKIDTEDGEPGEPAADGDADKDTNADQKNKKGVKRRREEHGRGYFEFIEENKYSCA
SFKSPVPPLEEEDEQFDDTKVCLDTYNCDLHFKVSRDRYSASSLTMESFAYLWSGGKANY
GVNKGRACFEMKITEKIPVKHISSKNMEIHDVQVGWSLVTGSLLLGEEEFSYAYSGKAKK
TTNCVTEDFGETFEENDVICCLIDFEGDEVVLSFSKNGGEPAVAFQVKKDSLNGQALFPH
VMCHNCAVEFNFGQMETPYFPEVEGYTFLQKIPVSDRVCGLKGPQTKADCEIIVMVGLPG
SGKTTWVKTHVQQNPGKYYILGSDTIVDKMMINSLKRQSKDITKLTAISQRAPLFLGKFI
EIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVCPSDDDYKQRVQKKVESDSKE
VPEHALLKMKGFYALPEEGESFSEVIYAELPKDEASKLLEQYKEESKTALPAEKKPNQGS
TTPKRGGGGQRSGNRGGKNQFGRSGPGQRGGGRGGFQNRGNFRGPPAPRGGFSRPPRGFL
PPPAFRGGFPNRGNFSRGGGPIPSLAVSHRGGSMRGNMGPRGGPMSRGGPMNRGNMGRGG
GGNMNRGGNRGHHSQFQPRGGNRGNFGNKNRDFGNNRNSGGFGNRNGMDKAQAFNQSWQQ
GFWNQKPWSQHYQPGYY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaattaacgtaaaaaagctgaaagtgaacgagctaaaagatgagctgaagaag
cgcaatctctcggacaaggggctgaaggccgagctgatggaccgcctgcaggccgcgcta
gacgaggaggccctggtcggggattcttccgcggcccaggagggagcggaggaggaagcc
ttcgaacaggccgccgaacaggaggtgatgggagaggaggaggaaggcccggtagaagag
agcatggaggccaacgaggaggaacaggcgcatggggatgaaggcaatggcgtagcggat
gacgaagacatgggtgagggggaagaaggggacgaagacgacgagatgctgaagggagat
gtggacgacatggagaaaattgacacggaggacggtgagcccggagagccggctgctgat
ggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgttaagagacgc
cgggaggaacatggaaggggctactttgaatttattgaagagaacaaatacagctgcgct
tctttcaagtctccggttccccctctggaggaagaagacgagcagtttgatgacactaaa
gtctgcttggatacctacaactgcgacctgcactttaaggtgtcgcgagaccgctacagt
gcctcgtcgctcaccatggagagctttgcttacctctggtctgggggcaaagccaactat
ggcgtgaacaaaggcagagcctgttttgagatgaagattacagagaaaattccagtgaag
cacatatccagcaagaacatggagattcatgatgtgcaggttggatggtctctggtcact
ggttcactgctgctaggtgaggaagagttttcctacgcatactctggcaaagccaaaaag
acaacaaactgcgtgacggaagactttggtgaaacattcgaggagaatgacgtcatctgt
tgtctcattgactttgagggtgatgaggtggtgttatccttctccaagaatggtggagaa
ccagctgtggccttccaggtcaaaaaggactctctgaacggccaagcgcttttccctcac
gtcatgtgccacaactgtgctgtggagttcaacttcggccagatggagacgccatacttc
cctgaggtggagggttacaccttcctgcagaagatccccgtcagcgacagagtttgcggg
ctgaagggaccgcagactaaagccgactgcgagatcattgtgatggttggcctgccaggc
tctgggaagaccacatgggtgaagacccacgtccagcagaaccctgggaagtactacatc
ttaggcagcgacactattgtggacaagatgatgatcaacagccttaaacgtcagtcgaag
gacatcacaaagctgactgccatttcccaaagagcgccgcttttcttgggaaagtttatc
gagatcgcagctcgcaagaagaggaactacatcttggatcataccaacctgtctgctcca
ggtcagaagaggaagatgtgtctgttcgccggattccagcgcaaagccgtggtcgtttgt
ccttctgatgacgattacaagcaaagggtccagaagaaagtggaaagtgacagcaaagaa
gtccctgagcacgctttgctaaaaatgaaaggcttctacgctttgccggaggagggcgaa
agcttcagtgaagtgatctacgccgagctgcccaaagacgaggcctccaagctgctggaa
cagtacaaagaagaaagcaagacagctctgcccgccgagaagaagcccaaccagggcagc
accacccccaaacgaggaggtggtggccagcgcagcggcaaccgggggggcaagaaccag
tttggacgcagcggccccggtcagaggggaggtggtcgcggcggcttccagaacaggggg
aacttcagagggcctcccgccccccgaggagggttcagtcggccccctcgcggcttcctg
ccaccaccggctttcaggggcgggttccccaaccgtggaaacttcagccgaggcggtggc
cccattcctagcttagctgtgtcccacagaggcggatccatgagaggaaacatgggcccc
aggggaggccccatgagcagaggaggtcccatgaacagagggaacatgggcagaggagga
ggcggcaacatgaaccgcggggggaaccgcggtcaccacagccagtttcagccgagaggc
ggtaaccgtggcaacttcggcaacaagaacagagacttcggcaacaacaggaacagtggg
ggctttggcaacaggaacgggatggacaaggctcaagccttcaaccagagctggcagcaa
gggttctggaaccagaaaccgtggagccagcattatcagcccggatattactga
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integrated database retrieval system
