Oryzias melastigma (Indian medaka): 112157921
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Entry
112157921 CDS
T07439
Symbol
snx17
Name
(RefSeq) sorting nexin-17
KO
K17929
sorting nexin-17
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112157921 (snx17)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112157921 (snx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNX17_FERM_C
SNX17-27-31_F1_FERM
SNX17-31_F2_FERM
PX
RA
RA_2
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
112157921
NCBI-ProteinID:
XP_024146801
Ensembl:
ENSOMEG00000015744
UniProt:
A0A3B3DNY5
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Position
LG24:13566450..13585272
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AA seq
472 aa
AA seq
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MHFSIPETEVRSGDNGSTYVAYNIHVNGVLHCRVRYSQLLGLHEQIKKEYGSNVVPAFPP
KKIFTLTPAEVEQRREQLEKYMQAVRQHPLLGACDLFNSFLRKAQQETQQIPTEEAALDV
CLCSGPKLSVHILTSDQTEDVLEAVATKLDLPDDLVGYFSLFLVHEGVDGSLTFVRKLQE
FELPYVSITSLQSSEFHIVLRKSYWDMAYDHDVMDNRVGLNLLYAQTVSDIERGWILVNK
DQQRQLKSLQEKGSKKEFIHLAQTLKYYGYIKFDPCITDFPEKGCQVIVSAGNNELNFHV
KLPNEQMKEGSFKVTRMRCWRVTSSQVPVTNGTTNPCGSTKCDVKLELAFEYLMSKDRLQ
WVTITSQQAIMMSICLQSMVDELMVKKSGGSIKKVLKKRHHESVHRSDSQQALKSPPLLE
SPDANREQIVKLSTKLNSVSLRGISTSNSTNDISGNDFHGNYAFEGIGDDDL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctctattcccgagacggaagttcgctcaggggacaatggttctacctatgtg
gcctacaacatccatgtgaacggcgtgctgcattgccgggtccgttacagtcaactcctc
ggcctacacgaacagataaagaaggaatatggcagcaacgtggttcccgccttcccccca
aagaagatcttcacgctgaccccagctgaggtcgaacagaggcgggaacagcttgagaaa
tacatgcaagctgtacgtcagcatcctttgcttggagcctgtgatttgttcaacagcttc
ttaaggaaagcacagcaggagacccaacagattcccacagaggaggcggctctagacgtc
tgcctctgcagcggtccgaagctcagcgtccacatcctgacctcggatcagacggaggat
gttcttgaagctgttgctacaaagctggacctcccggatgatctggtgggatatttcagc
ctcttcttggtccacgaaggagtggatggaagtttgacatttgtgcgaaagctgcaggag
tttgagctgccttacgtttccattaccagcttgcagagctcggaatttcacatagttcta
cgaaaaagttactgggacatggcctatgatcatgacgtcatggacaacagagttggctta
aatttactttatgctcagacagtttctgacattgagcgaggctggatactcgtcaacaag
gaccaacaaaggcagctcaagtcacttcaggaaaaaggctccaaaaaagagttcatccat
ctagcacagactctcaaatactacggctacatcaagtttgacccgtgcatcacggatttc
cccgagaagggatgccaagtcatcgtcagcgccggcaacaacgagctcaatttccacgtc
aagctgcccaacgaacagatgaaggaggggagcttcaaggtcacgcgcatgagatgttgg
cgagtcacgtcttctcaagtcccagtaaccaacggtacaacgaatccctgcggctcgacg
aaatgcgacgtcaaactggagctcgcctttgaatatctgatgagcaaggaccgcctgcag
tgggtcaccatcaccagtcagcaggccatcatgatgagcatatgccttcagtctatggtt
gatgaattaatggtcaagaagtctggcggcagcataaaaaaggttttgaaaaagagacac
catgagtctgtccacagatccgacagccagcaagcgctgaaatccccccctctactggaa
tcccctgatgcaaaccgagaacaaatagttaaactctctaccaagctaaactcagtgtct
ctccgagggatcagcacctccaactccaccaacgacatcagcggcaacgatttccacggc
aactacgctttcgaaggaatcggcgatgacgacctgtaa
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