Oryzias melastigma (Indian medaka): 112158093
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Entry
112158093 CDS
T07439
Symbol
gzf1
Name
(RefSeq) GDNF-inducible zinc finger protein 1
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112158093 (gzf1)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112158093 (gzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_11
zf-C2H2_15
zf-C2H2_ZN142
Zn_ribbon_8
C2CH-3rd_BIRD-IDD
zf-C2H2_PRDM15
zf-C2H2_8
HypA
HVO_2753_ZBP
Zap1_zf1
BTB_KLHL33
DUF7129
Motif
Other DBs
NCBI-GeneID:
112158093
NCBI-ProteinID:
XP_024147055
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Position
LG24:complement(1741031..1748440)
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AA seq
791 aa
AA seq
DB search
MGIKVVQLTSSSHHENLLSSLHDLKQQEHLCDVTVQVDFMGDVQEFRAHQVVLAAISGYF
RTALLTPRPMEDKLQLSNMHSHDFSKFLDFAYTGKVEVARKKIGEVQAMAQFLDCEGLSN
ICSEALSAGVLQKPSRKKSAEALEGDNSEGKEELSPHSPKKTLKKKNRKKNTKRPEGKLK
LKLGGLKVVQKSWYYNANQDEGEQENRTEEEDQPEEEEQNMSVDKAPSDGDDWECEEDVH
EDDPLFFLEEEEKEEEEGQSKEELKKSSKAQFQCNKCQRTFHYERSYLKHISTYHGVRAD
IVHRCDICMQTFANRSNLKIHEKHVHNNERQFACDSCSKTFKRKKDVIRHQRQVHERNLQ
HVCPDCGKTLSSKAALLLHERTHTGSRPYECGDCGARFTQNSALKMHRRTHTGEKPYACD
ECDSRFTQKHMLSYHKRSHTGEKPFMCEACGKSFASKEYLRHHSNIHTGFKPYKCVHCGR
GFAQRNSLNQHLKIHTGERPYSCKDCDKKFTQLNALQRHQRIHTGEKPYMCGLCKRTFTD
KSTFRRHTLVHDTDSPWKTYLVQLEGNLEERKPRSFKGEKAEKGEKKSTARKSPAAPSPA
PASSSTSPASSTDKIQLDSIVVPTEPVTLPSDWTSHGTIALVSHGDLEAITVIHTAVPPG
MQLQQLQQLQPIVTTDGTGGSLISLEGSGLPLPFSIPVSVKHPVSLTSAGPSGPLSVATL
SGPVSEALLQSVSEVQTVSTSDSTHPAPPAEAPGNKLRPGVGGLGSDVQVVIVGDEACGN
EKNLQTEAEEL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggggatcaaagtggtgcagctcacttcaagctcccaccatgaaaacctcctgtcttcc
ctgcacgacctgaagcagcaggagcacctctgtgacgtcaccgtccaggtggacttcatg
ggcgatgtgcaggagtttcgggcccaccaggtggttctggcggccatcagcggctacttc
aggacggctcttctgactccaaggcccatggaagacaaactgcagctgtcaaacatgcac
agccacgatttctccaagtttttggatttcgcttacacaggaaaggttgaggttgccaga
aagaagatcggtgaggtccaagcgatggcccagttcctggactgcgagggtttgtccaac
atttgcagcgaggctttgagcgccggagttttacagaaaccttccagaaaaaagtctgct
gaagctttagaaggtgataattctgaaggaaaggaagaactttctcctcattcaccaaaa
aaaacgctaaagaagaaaaacagaaagaagaacacaaaaaggccagaaggaaagctgaaa
ctgaagctgggcggcctgaaggtggtgcagaagtcttggtattataacgcaaaccaagac
gaaggggagcaggagaacagaacggaagaggaggatcagccggaggaagaagagcagaac
atgtccgtggataaagctccttcagacggagatgattgggaatgtgaggaggacgtgcat
gaggacgatccgttgttcttcctggaagaggaggaaaaagaggaggaagaggggcagtcg
aaggaggagttaaaaaaatcctccaaagctcagttccagtgcaacaagtgccagcgcacc
ttccattacgagaggagttacctgaagcatatcagtacgtaccacggagtgcgagccgac
atcgtccaccgctgcgacatctgcatgcagactttcgccaaccgcagcaacctgaagatc
cacgagaagcacgtccacaacaacgagcggcagttcgcctgcgactcctgctccaagacc
ttcaaacggaagaaggacgtcatccgccaccagagacaggtgcacgagcgcaacctgcag
cacgtgtgtccggactgtgggaagacgctcagctctaaggcggctctgctgttgcacgag
aggacgcacacggggtccaggccctacgagtgcggcgactgcggcgccaggttcacgcag
aactcggccttgaagatgcatcgcaggactcacacaggagagaagccgtacgcctgtgat
gaatgcgactctcgcttcacccagaaacacatgctgtcctaccacaagaggtcgcacaca
ggagagaagcccttcatgtgtgaagcctgcggcaaaagctttgcttccaaagaatacctg
cggcaccattcaaacatccacacggggttcaaaccctacaagtgtgtgcactgcggccga
ggcttcgcccagagaaactccctcaatcagcacctgaagatacacacaggtgagcgtccg
tactcctgtaaagactgcgataagaagttcacccagctgaacgcgctgcagcgacaccag
cgcattcacaccggagagaagccgtacatgtgcggcctctgcaagcgcacctttaccgac
aagtccaccttcaggagacacaccttggttcacgatacggactctccgtggaagacctac
ctggtgcagctggagggaaacctggaggagcggaaaccccgatccttcaaaggagagaag
gccgaaaaaggagagaagaagagcacggccaggaaaagtcccgccgctccaagtcctgct
cccgcttccagttccaccagtcctgccagcagcacggataaaatccagctggattccatc
gtagttccgacggaaccggtcactctcccctctgattggaccagccatggaaccatcgcg
ttggtcagccacggggacctggaggccatcacggtcatccacaccgccgttcctccgggg
atgcagctgcagcagctccagcagctccagcccatcgtgaccactgacggcacgggaggc
agcctcatttccctggagggctccggcctcccgctgcccttctccatcccggtctccgtg
aagcacccggtgtctctgacctccgcaggaccatccggccccctttccgtcgccacgctc
tcaggtcccgtttctgaagctctgcttcagtcggtttcagaggtccagacggtctccacg
tcggactccacacaccccgctccaccagcagaagctccggggaacaagctccggccaggc
gtcggcggtttggggagcgacgtgcaggtggtgatcgtcggggacgaggcttgtggaaat
gaaaagaaccttcagaccgaggcggaggagctctga
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