Oryzias melastigma (Indian medaka): 112158103
Help
Entry
112158103 CDS
T07439
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112158103 (rrn3)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
112158103 (rrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
bPH_7
Motif
Other DBs
NCBI-GeneID:
112158103
NCBI-ProteinID:
XP_024147068
Ensembl:
ENSOMEG00000002840
LinkDB
All DBs
Position
LG8:23458508..23473236
Genome browser
AA seq
607 aa
AA seq
DB search
MEEDRDFRNSDPLKTVRFGGTVAETLEKHRQGDFGDYELLQHQLADPDIKDAQIISWLQE
FRSCVTWLKKDHEQLIHTILKLPWVSRSQAVVDEYLAFLGNLVSAQTVYLCACLKMVVSH
FTPKRVIVVEEGVDISDSDDEDDNLPRIFDRSHDALQLIIRYVPSTSRFLLPILQDNFPF
VQKSSRTLECYVHNLLRVTVYAPFVRRDVLELIVGRMLKLDVSVSRADLEGAEEGVQEQS
TEEERLFDMDEDAPAEQTSAMKVTVHPVGERLDTLMTVLMAYIKDVCYVNGSFHVDRSKE
LFRDLLSIFDKLILPTHASSHVQFTLFYLCSFRLGLTEAFLDHLWRILQNPSQPVVLRQS
AAAYLGSFLARAKFIPMLTVRACLDLLVSWIHGYMDSQDRSDRQVCCDISLHGPFYASCQ
ALFYTLVFRHRAILETSMKKGLEYLQSMNLERVVMSQLNPLKVCLPSVALMFAAITRKYQ
IVFCYTILERNSRHALPVVQSSSGRDHVSTNTNPLDSFFPFDPYLLKRSGLMIEPLYQVW
EELADTELFPTETKQQGSKEDEDDFLCEETPPAELILGMTPSSCGSDICSPSSVGSPPPG
RPWPFRL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacagggacttccggaactctgacccgctgaaaacggtccggttcgggggc
accgtggccgagacgttagagaagcaccgacagggggactttggtgattatgagctgctg
cagcatcagctggcagatccagacattaaggacgctcagatcatcagctggctgcaggag
tttcggagctgcgttacttggttgaagaaggaccatgagcagctcattcataccatcctg
aagctcccgtgggtcagccggagccaggctgttgtggacgagtacttggccttcctgggt
aacctggtgtcagcccagactgtctacctgtgcgcctgcctcaagatggtggtctcccac
ttcacccccaagcgcgtgatcgtcgttgaggaaggagtggacatttctgattcggatgat
gaagatgacaatctccccagaatctttgatcgaagtcatgatgcgctgcagctgatcatc
agatacgtgccatcgacaagccgctttcttctccccatcctgcaagacaacttccccttt
gtgcagaaatcctccagaaccctggagtgttatgtgcacaacctgctgagggtcactgtg
tacgctccgtttgtgcgcagagacgtcctggagttgatcgtgggaaggatgctgaaactg
gatgtgagtgtctcccgtgcagatttggagggagcagaggaaggcgttcaggagcagagc
acagaggaggagaggctctttgacatggatgaagacgccccggctgaacagacatcagcg
atgaaggtgacggtccacccggtgggagagagactggacaccctgatgactgtcctgatg
gcctacataaaggatgtctgctatgtgaatgggtctttccatgtggaccggtccaaggag
ctgttccgagatctcctgagcatctttgacaagctcatcttgcccacacatgcttcctcc
catgtgcagttcacactcttctacctctgcagcttcagactgggtctgacagaggccttc
ctggatcacctgtggaggatcctgcagaacccgtcccagcctgtcgttctccgtcaaagt
gctgccgcatacttggggagctttcttgcccgagccaagtttattcccatgctaactgtt
cgggcctgtctggatttgctcgtcagttggatccacggctacatggacagtcaggaccgc
agtgacagacaggtgtgctgtgacatcagcctgcatggacctttttatgcctcctgccag
gcgctcttctacacactcgtattcagacacagagccattctggagaccagcatgaagaaa
gggctggagtacctccagagtatgaatctggagcgggttgtgatgagtcagctgaaccct
ctgaaagtgtgcctcccatctgttgccctcatgtttgctgccatcaccaggaagtaccag
attgttttctgctacaccatccttgaaaggaacagtcggcatgcacttcctgtggtccag
agctcctcagggagggaccatgtgagcaccaacaccaaccctctggacagcttcttcccc
tttgacccctacctgctcaagaggtctgggctgatgatcgagccgctgtatcaagtctgg
gaggaattggcagacacggagctgtttcccactgaaaccaagcagcaggggtcgaaggag
gatgaggacgacttcctgtgtgaggagaccccccctgcagagctcatcctgggaatgact
cccagctcctgcgggtccgacatctgcagcccgagcagcgtgggctccccccccccaggc
aggccgtggccttttagactgtag
DBGET
integrated database retrieval system
