Oryzias melastigma (Indian medaka): 112158135
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Entry
112158135 CDS
T07439
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04136
Autophagy - other
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112158135 (wipi1)
04136 Autophagy - other
112158135 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112158135 (wipi1)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112158135 (wipi1)
Membrane trafficking [BR:
oml04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112158135 (wipi1)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112158135 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40_WDHD1_1st
CNH
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_2nd
Beta-prop_HPS5
BCAS3_WD40
DUF5711
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
112158135
NCBI-ProteinID:
XP_024147123
Ensembl:
ENSOMEG00000003137
LinkDB
All DBs
Position
LG8:23192869..23205918
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AA seq
454 aa
AA seq
DB search
METAEGAGAAGEADEPRPRFGCASFNQDSTSLAVGTRTGYKIFSLSTVEKLECIYENAEV
PDVFIVERLFSSSLVVVVSSATPQRMNIYHFKKGTEICNYSYSSNILSVKLNRQWLVVCL
EESIYIHNIKDMKLIQTLVNMPPNPSGLCALSINNSNSFLAYPGSATTGEIVVYGANTLS
TVAVISAHDAPLAALTFNTSATKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVSIRS
LSFSLDALFLCASSNTETVHIFRLEQLEPTEGGEADTWTSYVGRMFSAASSYLPAQVCDV
MSQDRAFATVHLSSSAHSSVCTLVSIQKLPRLLVVTADGQLFIYNVDLQDGGECELLSKH
NFFDDHGSSEKGSESAGSEQTICPPSYAATAALPASRPITATLTGYSEDGGAKRGEVIPE
HEFASGPVCLDDENEFPPIKLCRDGVGGCRGGPL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcggaaggcgcgggcgccgcgggcgaagcagacgagccgcggccccggttc
ggatgcgcctccttcaaccaagactctacgtcattggctgtgggaacaaggacaggctac
aagatcttttctctttctactgtagaaaagctggagtgcatctacgagaacgcagaggtt
cctgacgtcttcatcgtggagcgtctgttctccagcagtctggtggtggtggtgagcagt
gccacgcctcagcgcatgaacatctatcacttcaaaaagggaacagagatttgcaactac
agctattccagcaacatcttgtctgtgaagctcaacagacagtggttagtggtgtgcctt
gaagaatccatttatattcacaacatcaaagacatgaagctgatccagactctggtcaac
atgccgccaaacccctcaggtctctgcgctctctccatcaataattccaactccttcctg
gcgtaccccggcagtgccactaccggagagatcgtggtgtatggtgccaacactctgagc
acagtggcagtgatctctgcccacgacgctcctctggcagctctgaccttcaacacctca
gccaccaaacttgccagcgcgtcagagaggggtacggtcatccgagtgttttccattcct
gaaggtctgcgtctgtttgagtttcgcagaggcatgaagaggtatgtcagcattcgctct
ctgtccttcagcctggatgctctcttcctctgtgcctccagcaacactgagactgtgcac
atcttcaggctggaacagctggaaccaacggaggggggcgaggctgacacctggacatcg
tatgtggggaggatgttctcagcagccagcagctaccttcctgctcaggtgtgtgacgtg
atgagccaggaccgtgccttcgccaccgttcacctgtcgtcatccgctcacagcagtgtc
tgcaccttggtcagtatccagaagcttccacggctgctggtggtcacagctgatgggcag
ctcttcatctataacgtggatctgcaggatgggggcgagtgtgaacttctctccaaacac
aacttctttgatgaccatggcagctcagagaaaggcagcgagtcagcaggctcagagcag
actatttgccccccctcatacgctgcaactgctgccttacctgcctcccgtcccatcact
gcaaccctcaccggttactctgaggacggcggcgcaaagaggggggaggtcatcccggag
catgagtttgcctctggacctgtgtgtctggacgacgaaaatgagtttcctcctataaag
ctgtgccgtgatggagtcggaggctgcaggggggggcccttgtaa
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