KEGG   Oryzias melastigma (Indian medaka): 112158149
Entry
112158149         CDS       T07439                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112158149 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oml03400]
    112158149 (smek1)
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     112158149 (smek1)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     112158149 (smek1)
SSDB
Motif
Pfam: PP4R3 WH1 TMEM164 Ran_BP1 IgD_del_linker
Other DBs
NCBI-GeneID: 112158149
NCBI-ProteinID: XP_024147141
Ensembl: ENSOMEG00000006704
LinkDB
Position
LG24:complement(7336122..7350070)
AA seq 821 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGTSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEGENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDVVDESEEE
RFDDMSSPGLELPPCELNRLEDLAELVASSLPSPLRREKLALAVENEGYIRKLLELFRIC
EDLDNREGLHHLYEIIKGIFLLNRTALFEVMFSDECIMDVIGCLEFDPSLLQPRRHREFL
TKTARFKEVIPISDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTDLFAQLTDESTDDDKRHELVSFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVQVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLLDPENMLATANKTEKTEFLSFFYKHCMHVLSAPLLANT
TEEKPSKDDFQTSQLLALILELLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLAL
CALRFMRRIIGLKDEFYNRYIMRNFLFEPVVKAFLKNGSRYNLMNSAIIEMFEYVRVEDV
KSLTAHIVENYWKALEDVDYVQTFKGLKLRYEQQRERQDNPKLDSMRSILRNHRFRRDAR
TLEDEEEMWFNTDEDDLEDGEAVVPPSDKMKSEEDLMEPISKFMERKKLKDSDEKEVLGK
STLTGRQSPSFKLSFSGSTKTSISSPPSSASLNPGSPGSPGSPGSGSRGSPPTTTVTTKQ
GLVGLVDYPVDDEEEEEEEEEEDGESKEDTVPPTKKSKLSS
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgactgacactcgtcgacgagttaaagtctacaccctcaatgaggacagacagtgggac
gaccgtgggactggccatgtctcttcaggctatgtggaacggttgaaaggcacttcttta
ctggtgcgagctgagagcgatggttcactactgttggagtcaaaaatcaacccaaacaca
gcctaccagaaacaacaggatacattgattgtatggtcagaaggtgaaaactacgattta
gcactcagtttccaggaaaaggctggatgtgatgaaatttgggagaaaatatgccaagtg
cagggaaaggatccatcagtggacattactcaagatgtggtggacgagtctgaagaggag
cgctttgacgacatgtcgtcaccgggactggagctgccaccctgtgaactaaatcgcttg
gaggacctcgccgagctggtggcctcctccctcccgtcgccgctacggcgcgagaaactt
gcactggccgtggagaatgaagggtatatccgcaagcttctggaactctttcgtatatgt
gaggatttggacaacagagagggactgcaccacctgtatgaaataattaaaggcatcttc
ctgctgaaccgcactgccctcttcgaggtcatgttctccgacgagtgcatcatggacgtt
atcggctgtttagagtttgacccgtcactgctgcagccacggcggcatcgggagttcctg
actaagacggcccgttttaaggaggtgattcccatttcggatcctgaactgcgtcagaaa
atacaccagacatatcgagtgcagtatattcaggatatggtgctgcctactccctctgtt
tttgaggaaaacatgctgtccaccctgcactccttcatcttcttcaataaggtggagatt
gtgggcatgcttcaggacgatgaaaaattcctgacggacctctttgcacagctaacagac
gagtccacagacgacgacaaaagacacgaactggtgagcttcctaaaggagttctgcgca
ttctcacaaacgttacaacctcaaaacagagacgccttcttcaagacattgtcaaacatg
ggcattttacctgcactggaggtcatcctgggcatggatgatgttcaagttcgcggggca
gccacagatatcttctcttatctggtggagtataacccctccatggtacgagagtttgtc
atgcaggaatctcagcaaaacgatgatgacattctattaatcaacttgatcatagagcac
atgatctgtgacacagacccagaactcgggggtgcagttcagcttatggggttgctacgg
actctgctggatccagagaacatgctggcaaccgctaataaaactgaaaagacagagttc
ttgagttttttctacaaacattgtatgcatgtcctttccgctccactactagccaacacc
acagaagaaaaacctagtaaagatgattttcaaacgtcgcagttattggcgttgattttg
gagctgttaactttttgtgttgagcaccacacgtatcacataaagaactacatcatcaac
aaagatattctcaggagggtactagtgctcaccgcctcccagcatgccttcctggcactt
tgtgccctacgcttcatgcgaaggatcattggtctgaaggacgaattctacaatcgttac
atcatgagaaactttctctttgagccggtcgtcaaagcgttcctgaaaaacggctcgcgc
tacaacctgatgaactccgccatcattgagatgtttgaatacgtccgcgtggaggatgtg
aaatctctcacagctcatatagttgaaaactactggaaggctttagaagatgtggactac
gtccagaccttcaaaggcctcaagctgcggtatgagcagcagcgagagcggcaggacaac
cccaagctggacagcatgcgttctatcctacggaaccaccgctttcggcgcgatgcgcga
acactagaagacgaagaggagatgtggttcaacacagacgaggacgacctcgaagacggc
gaggcggtggttccaccgtctgacaagatgaagagcgaggaagacctcatggaaccaata
agcaagttcatggagagaaagaaattgaaagactcagacgaaaaggaagttttgggaaaa
tcaactttgacaggaagacagagtccaagcttcaagctttccttctctggatccactaaa
accagtatatccagccctccttcgtctgcctccttgaaccctggatctccaggatcacca
ggatctccaggttcaggctcgcggggttcaccccccaccaccactgtaaccacaaagcaa
ggtttagtcgggctggtggactatcctgtcgacgatgaggaggaggaggaagaggaggag
gaggaggacggggagagtaaggaggacacggtgccacccacgaagaagtccaaactgagc
tcgtaa

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