Oryzias melastigma (Indian medaka): 112158194
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Entry
112158194 CDS
T07439
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112158194
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112158194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
ATG16
APG6_N
HAUS-augmin3
bZIP_1
TSC22
KxDL
Halo_GVPC
Trypan_PARP
DUF7491
Motif
Other DBs
NCBI-GeneID:
112158194
NCBI-ProteinID:
XP_024147201
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Position
LG24:16385545..16394005
Genome browser
AA seq
739 aa
AA seq
DB search
MATRASAYRATCNSCWHGKGGGGGGGEASGAKKSSKSAVGCGPGFWKEGCLQTELIQFHL
NKSLGKKGTKMQAKSASPPASEPELSPEPDSPKREPQPDQNLQDEIERLEDENDDLKTEI
EEMRAEMDEMRDTFYEEDACQLQEMRRELERANKNCRILQYRLRKAERKRLRYAQTGEID
EELLRCLEQDLKVAKDVSVRLHNELEKVEEKRTKTEEENEKLRQRLIEVEVTKQALQNEL
DKTKESQKRRGSKDVQKTDKRAAQTPNEEDNDDLKCQLAFIKEEAVLMRKKAAKIDKEKD
RLEQELQKYRSFYGELDSSHPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVE
NRGLRAELDDLRGEGEGSGGSGCGAPGGQSAGRSLGDDLTELRQQLQLVEDEAELLRRNL
ADAEEQNKRVTSELNKLRFKAGTHEGGARHGGGGVTADGGKMEALQEELKAARLQINDLS
GKVMQLQYENRVLLSNMQRYDLASHLSLRPSPRDSDAESDAGGATSGRRESDEDSTSSRL
LPPHRKREGPVGGESDSDEVRNNNGSSRCMTPTRGLYTPTGPEGAASSALARFLPGGRCS
LRERQQMIDIRVEAERLMRTIDRLIADTAAFISEARVFVSNGDLMFGRGGEDGGEDDGSR
IREHELLYRINAQMKAFRKELQGFIDRLEVPRLEDREAEEPLSMFQPIILLILILVLFSS
LSYATIFKLVFLFTLFFVL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctacaagagccagcgcttaccgtgccacctgcaattcttgctggcatggaaaagga
ggaggaggaggaggaggagaggccagcggggcgaagaagagcagcaagagcgcagtgggc
tgcggacccgggttctggaaggaaggatgcttgcaaaccgagctgatacagttccacttg
aataagagcttggggaagaaggggacgaagatgcaggccaagtctgcatccccaccggct
tcagagccggagctgtctccggaaccagacagcccaaagcgggagcctcaaccggaccag
aacctgcaggacgagatcgaacggctggaggacgaaaacgatgatctgaagactgaaatc
gaggagatgcgggcagagatggatgagatgagggacactttctatgaggaggacgcatgc
cagctgcaggagatgagacgggagctggagagggccaataagaactgccggatcctgcag
taccgactgcgcaaggctgagaggaagaggctgcgctacgcgcagactggagagatcgat
gaggagctgctcaggtgtctagagcaggacctgaaggtggccaaagatgtatctgtgcgg
ctgcacaacgagctggaaaaagtggaggagaaacgcacgaagacagaggaggagaatgaa
aagctgaggcagagactcatcgaggtggaagtgaccaaacaagctctgcagaacgagctg
gacaagaccaaagagtcacaaaaaagaagaggaagcaaggatgtccagaagactgacaaa
agggccgcacagactccaaacgaggaggacaacgatgacctgaagtgccagctggctttc
atcaaagaggaggcggtgctgatgagaaagaaagcagctaagatcgacaaggagaaggac
cgtttggagcaggagttacagaagtaccgttctttctacggagaactggacagctcccat
cctaaaggcgaggctggggggccgcccaccacccgtgaatcagaactgaagctgcgcctt
cgtctggtggaggaggaggccaacattttggggagaaagatagttgagctggaggtggag
aaccgaggcctcagagccgagctggatgacctccggggggaaggagagggctctggaggc
tctgggtgtggggcgccaggcgggcagagcgccgggcgcagcctgggagatgacctgacg
gagctccggcagcagctgcagctggtggaagacgaggcagagcttctgaggaggaacctc
gcagacgccgaggagcagaacaagagggtgacctctgagctgaacaagctgcgcttcaag
gccggcactcatgagggaggggcaaggcatggaggaggaggagtcacagctgatggaggg
aaaatggaagctttgcaggaggagctgaaagctgcgaggctacagatcaatgatctcagt
gggaaggtgatgcagctgcagtacgagaatcgagttctcctctccaacatgcaacgctat
gatctggcctcccacctctccttgaggccgagcccacgggacagcgacgcggagagcgat
gccggtggcgccacgagcgggcgccgcgagagcgacgaggactccacctcctctcgcctg
ctcccacctcaccgcaagcgagagggccccgtgggcggcgagagtgactcagacgaagtc
aggaacaacaacggcagcagcagatgcatgacgcccacgcgggggctctacacacccacc
ggaccagagggcgccgcctcctccgccttggccagattcctgcccggcgggcgctgtagc
ctccgtgagaggcagcagatgatcgacatccgcgtggaagctgagaggctcatgcggacc
atcgacaggctcatcgccgacaccgccgccttcatctccgaggccagggtcttcgtctca
aatggcgacctgatgtttgggagagggggagaagacggcggagaggatgatgggagcagg
atcagggaacatgaactgctgtaccgcatcaacgctcagatgaaagccttccggaaagag
ctgcagggtttcatcgacaggctggaggtgccgcggctggaggacagggaggcggaggag
ccgctgtcgatgttccagcccatcattttactgattctcatcctggtgttattttcatct
ctctcctacgccaccatctttaagctagttttcctctttactctgttttttgttctgtga
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