Oryzias melastigma (Indian medaka): 112158242
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Entry
112158242 CDS
T07439
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112158242 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112158242 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112158242 (rars2)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112158242 (rars2)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
112158242 (rars2)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112158242 (rars2)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112158242 (rars2)
Prokaryotic type
Other AARSs
112158242 (rars2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112158242 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
112158242
NCBI-ProteinID:
XP_024147260
Ensembl:
ENSOMEG00000022692
UniProt:
A0A3B3E140
LinkDB
All DBs
Position
LG24:complement(4674297..4682686)
Genome browser
AA seq
579 aa
AA seq
DB search
MACFFRRTIAAKLGRTLQHPEDVFIPAITATPVLKKQQSPDFRLSVSTLRIDGILPSNED
IQLQTENLANQLKRDVVVEEISAEKGVIHFHVNRELLAEKVLEPFKNGADDKYGLNSDLL
TPLKRGTTLVEFSSPNIAKKFHAGHLRSTIIGNFVANLKESLGNSVIRMNYLGDWGMQFG
LLGAGFEKFGCIEKLKENPLQHLFEVYVRVNKEVEQNEALMQAARDFFRQLEQHDDEAVS
LWQQFREITVQEYQHVYKRLGVHFDVYSGESFHRDQAQTVVRQLQDRGLLGTSAKGMGVV
DLSPDGDMSNVCTVLRSDGTTLYITRDLAAAINRQEKYSFDEMIYVTDKSQANHFRQLFQ
ILLAMGHPWADRCRHLPFGLVRGMKTRTGDVVFLEDVLDEARARMLHNMSQSHTTKELEN
PEDTAEKVGICALIVQDFKGPLQSDYKFDWAQMLQAQGDTGVFLQYTHARLCSLLRTNKG
VDEGEFNPSLLRETSSINILQHLLRYDEVLLQSAQDLQPKHLVNFLIKLSHFIASAHRDL
PVKGSPPDVAQTRLRLFRGACSVLANGMRILGVTPVQKM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttttttagaagaacaattgcagcgaagctcgggcggacgctgcagcacccc
gaggatgtatttattccagctataaccgccacgcccgttctgaagaaacaacagtctccc
gacttccggctgtcagtcagcacgttacggatcgacgggatcctgccatcgaatgaagac
attcagctgcaaacagaaaacctggctaatcagctgaaacgagacgtcgtggtggaagaa
atctctgctgaaaaaggagtaatccactttcatgtgaaccgtgagcttttagcagagaaa
gtgttggagccattcaaaaacggggcggatgacaagtacgggttaaacagcgatcttttg
actcccctgaagagaggaaccactttagtggagttcagctctccaaatattgccaaaaaa
ttccacgctggacacttgcgctccacaattattggaaactttgtggctaacttaaaagaa
tccctgggaaactctgtgatccggatgaactaccttggagactggggcatgcagtttggg
ttacttggagccggatttgagaagtttggatgcattgaaaaattaaaagagaatcctctt
caacatttgtttgaggtttatgtccgagtcaacaaggaagtggagcaaaacgaggctttg
atgcaggccgccagagacttctttagacagctggagcagcacgacgacgaggcggtgtcg
ctatggcaacagttcagagagatcacggtccaggagtatcagcacgtttacaagcggttg
ggggttcactttgacgtgtacagcggggagtcgtttcaccgagaccaagcccagacggtg
gtgcggcagctgcaggaccgagggctgctgggaacctcagcaaaggggatgggggtcgtg
gacctctctcctgatggagacatgagtaacgtctgcaccgttctccgcagtgacggcacc
acgctctacatcaccagagatctcgctgctgccataaaccgacaagagaaatattccttt
gatgaaatgatttatgtgacagacaaaagtcaagcaaatcacttccgccagttgttccag
atcctgctcgccatgggacatccgtgggctgacaggtgtcggcacctaccgtttggtctc
gtccggggcatgaagaccaggacgggcgacgtggtgttcctggaggacgtgctggacgag
gcccgggccagaatgctccacaacatgagccagtcgcacacgacgaaggagctggagaat
ccggaagacacggcggaaaaagtgggaatctgtgctcttatagtccaggatttcaaaggt
ccgctgcagtccgactataagttcgattgggcgcagatgctgcaggctcagggtgacacc
ggcgtcttccttcagtacacgcacgcccgactctgcagtttattgaggacaaataaagga
gtggacgaaggggaattcaatccttcccttttacgagagacgtcgagcatcaacatcctg
cagcacctccttcgttacgatgaggtgctgctgcagtcggcgcaggatctgcagcccaaa
cacctggtgaactttttaatcaagctgagccacttcatcgcttcagcacacagagatctg
ccggtgaaaggaagccccccagacgttgcccagacaaggttgcgcctcttcaggggggcc
tgctccgttttagccaatgggatgaggatcctcggcgtcacaccagtacaaaaaatgtga
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