Oryzias melastigma (Indian medaka): 112158291
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Entry
112158291 CDS
T07439
Symbol
atad2b
Name
(RefSeq) ATPase family AAA domain-containing protein 2B
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112158291 (atad2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
AAA_16
AAA_22
NPHP3_N
AAA_2
AAA_5
nSTAND3
IstB_IS21
Mg_chelatase
RNA_helicase
SLFN-g3_helicase
AAA_7
AAA_28
RuvB_N
TIP49
ResIII
AAA_25
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
112158291
NCBI-ProteinID:
XP_024147335
Ensembl:
ENSOMEG00000020237
LinkDB
All DBs
Position
LG24:complement(2161698..2224377)
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AA seq
1448 aa
AA seq
DB search
MVNTRKSSRIRCDPFISSRTRSSSRLERNSEDHKEPGSDASTPSSPRLGPPSKRTRRQTA
SERSSSDTSPSPQAKGQRVSWDIPTYRTRLSSRIMQNGHALRSRRGEDGGGGDRSHINGH
VELKRSCRVKKSQFEHLNQSLLFDQLVNSTAEAVLQEMDNITSIRQSREVERLRMWTRDT
EEENMDMYSRVKRRKSMRRCTFNMPAHHKVMGKTEEEEEEEEEEGTEESHGEEEEEDAEE
DDEDDEGDEAEEAEENDRPYNLRQRKTVQRYEAPPIEPVNRKQSNPSLFDTHRSPARRSH
IRVKKHAIHSSDTTSSSDEERFERRKSKSMTRARNRCLPMNLTAEDLASGVLRDRGKVGA
SLADVDPMNLDNSVRFDSVGGLSYHIQSLKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPP
GTGKTLVARALANECSQGNRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIF
FDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGR
FDREFLFSLPDKKARKQILKIHTRDWNPKLSEPFLDELAEKCVGYCGADIKALCTEAALM
ALRRRYPQIYGSSVKLQLDVTSIVLGPGDFSKAMRTIVPASQRALAPPGRALSPVLRPLL
DGSFSLVLKALLRVFPHAQPTDRDNTQGGDNHLLEEDLYSDDNEDGSASIYEAQPAASPK
SQPSSSSAMHRTFLHFSSSALQQPTSYRPRLLLAGAPGSGQSSHLAPALLHHLDKLPVHR
LDLPTLYSISAKTPEESCAQVFREARRSMPSVVYMPHISEWWDTVSDTVRSTFITLLQDV
PSFSPVLFLATAETPYSKLSDEVRSMFQRTYGEVVILCPLGEEERRNFFSDLLLVQAARP
PPRLRSSESCKEVLPVAEAPGQRVLSVEEQRRLAEQEENTLRELRLFLRDVTKRLATDKR
FSIFSKPVDIEEVSDYLEVIRQPMDLSTIMTKIDTHRYLTVKDFLVDVDLICSNALEYNP
DKDPGDKVIRHRACSLKDTAHAIFASELDPEFDRMCEDIKEARKKRDFQAPVQPAASAGS
PLVQKNPGTGEERAKSSTQGEAPEKSCTTNHIKRKIRRRPSWGRGIIRKKKIYKKEIEEE
EEEPEAEVEGAAPSDSCLTQDEESSCDTADPQPNGHHPHGPSTEEESSNEPPDKSHADDA
SDAPQGPKPEGGGKEPPAKEVEAVSAGKHVDPCCLGGCSQSTVDAKTADFQPLIQRAESS
DAQPHYAEGLLASRVGHVNGTESMDSLDSQSLKSGDEAHTRTPQSAAEGINEPEQEEHKD
EGRCTQEQLPLDGGPPAEPSEEDGHKEDGSDPTTVGTSASEQLQGLPGRAEEEEPLSAPP
HPPVVVDHQRLQALLDTVVKKSEGFSVEQLERLYSLLSQCIYRHRREYDKTRLLEEMEEK
TQHFHTFL
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacgaggaaaagctctcggataagatgcgacccgttcatctcctccaggacc
aggtcgtcgtcgagactcgagcgaaactccgaggatcacaaggaacccggcagcgatgcg
agcacccccagcagcccacggttggggccgccgtccaaacggacgcgtcggcagacggcc
tcggagcggagctccagcgacacctcgccgtcgccgcaggcgaagggccagagggtcagc
tgggacattcccacctaccgcaccagactgtcttctcgcataatgcaaaacgggcacgct
ctgagaagtcgcagaggtgaggacggcggaggtggagatcgctcccatattaacggccac
gtggagctgaagaggagctgccgggtgaagaagagccaattcgaacacctcaatcagagc
ctgctgtttgaccagctggtgaacagcacggccgaggcggtcctccaggagatggacaac
atcaccagcatcaggcagagccgcgaggtggagcgactgcgcatgtggaccagagacacg
gaggaggaaaacatggacatgtactcccgggtgaagcgcaggaaatccatgcggcggtgc
acgttcaacatgcccgcgcaccacaaagtcatggggaaaacggaggaggaggaagaagag
gaagaggaagaagggacagaagagtctcatggtgaagaagaagaggaagatgcagaggag
gatgacgaagatgatgaaggggatgaagctgaggaagcagaagaaaacgaccgaccgtat
aatctgaggcagcggaagacggtgcagagatacgaggctccaccgatcgagcccgtcaac
agaaaacagagcaatccttcactttttgacacacaccgatcgccagcgagaagaagccat
ataagagtgaagaaacacgccattcacagcagtgacacaacctcttcctctgacgaagag
cgatttgagcggaggaagagcaagagcatgacccgggccaggaacagatgtttgcccatg
aacctgactgcggaggacctggccagcggcgtcctccgtgacagagggaaagtaggggcc
agcttggccgacgtggaccccatgaacctcgataattcagtgagattcgatagtgtggga
ggcctcagttaccacatccagtcactaaaagagatggtcgtgttccctctgctctatccg
gaagtctttgagaagtttaagatccaacctcccagaggctgtttgttttacggcccgccg
gggacggggaagaccctggttgctcgagcgctagctaacgagtgcagccaggggaaccgc
aaggtttccttcttcatgaggaaaggagccgactgtctcagcaagtgggtgggggagtcg
gaacggcagctccgcctcctctttgaccaggcttacctgatgagaccttccatcattttc
tttgatgagattgacggtttggctccggttcggtccagcagacaagaccagatacacagt
tctattgtgtccactcttctggcgttgatggacggcctggacagccgaggggagatagtg
gtcatcggtgctacaaacagacttgactctatcgacccggcactcaggaggcctggacgc
tttgaccgggagtttctgttcagcctgcccgacaagaaggccagaaagcaaattttgaag
attcacaccagagactggaaccccaaactttctgagccatttctggatgaacttgcagaa
aaatgtgtcggctactgcggcgccgacatcaaagcactttgcacggaggcagccttgatg
gcgctgcgccgccgctacccccagatctacggcagcagcgtcaagctgcagctggacgtc
acgtctatcgtcctggggcccggtgacttcagcaaggccatgaggacgatcgtgccggcc
tcccagagggccctggctccgccggggcgagccctgtcccccgtcctcaggcctctgctg
gacggctccttctcattggtgctgaaagctctgctcagagtcttcccccacgcccagccc
accgacagggacaacacacaaggcggtgacaatcatctgctcgaagaagatttgtacagc
gatgacaatgaggacggctctgcctccatctatgaagcccagccagctgcatccccaaag
agtcagccctcctcctcctctgcaatgcacagaaccttcctccacttctcctcctctgcc
ctccagcagcccacgtcctaccggccccggctgctgctggcgggggcccccggctccgga
cagagctcccatttggcccctgccttgctgcaccacctggacaagctgccagtgcaccgc
ctggacttgcccactctgtactccatcagcgccaagacgccggaggagtcctgcgctcag
gttttccgtgaggcccgtcggagcatgcccagcgtggtgtacatgcctcatatctcggag
tggtgggacaccgtgagcgacactgtgaggagcaccttcatcacgctgctgcaggatgtg
ccgtccttcagccccgttctcttcctcgctactgcggagacgccgtactctaagctctct
gatgaggtgaggagtatgttccagaggacctacggggaggtggtcatcctgtgtcctctg
ggagaagaggagaggaggaacttcttctcggaccttctgctggttcaggcggcgcgacct
cctccacgcctcaggagttcagaaagctgtaaagaggtgcttccggtggccgaggctcca
ggccagagagtcctgtccgtggaggagcagcgccgcctggccgagcaggaggagaacacg
ttacgggagctgagactcttcctcagggacgttaccaagcgcctggccaccgacaagcgt
ttcagcatcttcagcaaacccgtggacatcgaggaggtgtctgattatctggaggtgatt
cgacagcctatggacctatccaccatcatgacgaagatcgacacccatcggtatttaacg
gtcaaagacttcctggtcgacgtcgacctgatttgcagcaacgctttagagtacaatccc
gacaaggatcccggagacaaggtgatccggcaccgagcctgcagtctgaaggacacggcc
cacgccatatttgcttctgagctggatcccgagtttgaccgcatgtgtgaggacatcaag
gaggcgcgcaaaaagagggacttccaggcgcccgttcagccggcagcgtctgcaggttcg
ccgctggtccaaaagaaccccggtaccggagaggagcgggccaagagcagcactcagggt
gaagcgccggagaaatcctgcaccacaaatcatatcaagaggaaaattcgtcggcggcca
tcttgggggcgtggcataatacgcaagaagaagatctacaagaaagagatcgaggaggaa
gaggaggagccagaagcggaggtggaaggggcggcgcccagcgactcgtgtctgactcag
gacgaggagtcgtcttgcgatacggccgatcctcagcccaacggccatcacccccacggc
ccctccacggaagaggagagctccaacgagccccccgacaagagtcacgccgacgacgcc
agcgatgcaccacagggtccaaaacccgaggggggagggaaggagcccccagccaaagag
gtcgaggcggtgagcgctgggaaacacgtggacccctgctgcttggggggctgttcccag
tcgacggtggacgccaaaacggccgacttccaacctttgattcaaagagcggagtcttcg
gatgctcagcctcattacgccgagggtctcctcgcctcacgagtgggccacgtgaatgga
accgagtcaatggacagcctggactcgcagagcctcaagagcggcgacgaggcgcacaca
aggactcctcagagcgcagctgagggcattaacgagccggagcaggaagagcacaaagac
gagggcagatgtactcaggagcagcttccgctggatggcggcccgccggcagaaccgagc
gaggaagacggacacaaagaagatggatccgacccgacgaccgtcggaacaagcgcatca
gagcagctgcagggacttcctggaagagcagaggaggaggagccactctcggctcctcct
catccgccagtcgtggtcgatcaccagcgacttcaggctctgctggacacggtggtgaag
aagagcgagggcttcagcgtggagcagctggagaggctgtactctctactgagccagtgc
atctaccggcaccgcagggaatacgacaagacccggctactggaggagatggaggagaaa
acccagcattttcatacattcctgtga
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