Oryzias melastigma (Indian medaka): 112158338
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Entry
112158338 CDS
T07439
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04517
IgSF CAM signaling
oml04530
Tight junction
oml04810
Regulation of actin cytoskeleton
oml05100
Bacterial invasion of epithelial cells
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112158338 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112158338 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
112158338 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112158338 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112158338 (zgc:86896)
05100 Bacterial invasion of epithelial cells
112158338 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112158338 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112158338 (zgc:86896)
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Arp2/3 complex
112158338 (zgc:86896)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112158338 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Rax2
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
SH3_3
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
112158338
NCBI-ProteinID:
XP_024147407
Ensembl:
ENSOMEG00000003180
UniProt:
A0A3B3BB44
LinkDB
All DBs
Position
LG8:23178609..23191339
Genome browser
AA seq
356 aa
AA seq
DB search
MSLHSFGFEPLSCHAWNKDRTQIAVSPNNNVVNIYEKKGKDWVKIDELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDSVWKPTLVLLRINRAATCVKWSPLENKFALGSGARLI
SVCYFDKENDWWLSKHIKKPICSTVLSLSWHPNNILLAAGSADLHCRIFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPAGDQLAWVAHNSSISVADATEGKQVTQL
STSHLPLLSVLFVSASEIVAAGHDCCPYQFTFKSPGSLEFVKKLDIPKQTSKGSMSAMQH
FRNLDKKATEEDDKELNTLHQNSITQLCVMSGDKSKVDKYSSVGLDGAMVIWTFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcacagctttggctttgaaccactctcctgccacgcctggaacaaagacagg
acacaaattgctgtgagccctaacaacaatgtggtaaatatctacgagaagaaaggaaaa
gactgggtgaagatcgatgagctgacggagcacagcggacgcatcacaggaattgactgg
gctccagagtccaaccggatcgtgacatgcgcatccgatcggaacgcctacgtgtggact
ctgaaggatagcgtttggaaacccacgctggttctgctgaggatcaaccgtgcagccact
tgtgtgaagtggtccccactggagaacaagtttgctctgggcagtggagctcgactcatc
tctgtctgctattttgacaaggagaacgactggtggttaagtaagcacattaagaagccc
atttgttccactgtcctgagtctgagctggcatcctaacaacatcctcctggcagcgggg
tctgcagaccttcactgcaggatcttttctgcctacatcaaagatattgaggacaagcct
ggacccacagcctggggggcaaagatgccgtttggagaggttctgctggagcacaaggat
tgtggaggatgggtccacagtgtctccttctccccagcaggagaccagctggcctgggtg
gcccacaacagcagcatcagtgtggctgatgccactgagggaaaacaggtgacccagctg
agcaccagccatcttccactgctcagcgtcctcttcgtcagtgcatctgagattgttgct
gcgggtcatgactgctgtccatatcagttcacattcaagagtcctggttccctggaattt
gtgaagaagttggatattcccaagcagacctccaagggcagcatgtcagccatgcaacat
ttccgcaacttggataagaaggccacagaggaggatgacaaagaactgaacacccttcac
cagaacagcatcacgcagctgtgcgtcatgtcaggggacaaaagcaaagtggacaagtac
agcagtgtgggtctggacggagccatggtgatctggacttttaagcactga
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