Oryzias melastigma (Indian medaka): 112158394 Help Entry 112158394         CDS       T07439                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism oml  Oryzias melastigma (Indian medaka) Pathway oml00100   Steroid biosynthesis oml01100   Metabolic pathways Module oml_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:oml00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     112158394 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:oml01006]     112158394 (fdft1) Enzymes [BR:oml01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      112158394 (fdft1) Prenyltransferases [BR:oml01006]  Terpene biosynthesis   Squalene/phytoene synthase    112158394 (fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH HAUS4 Motif Other DBs NCBI-GeneID:  112158394 NCBI-ProteinID:  XP_024147493 Ensembl:  ENSOMEG00000020947 LinkDB All DBs Position LG24:complement(18140975..18146395) Genome browser AA seq 450 aa AA seqDB search MAGACCKCPVTLSVFKRSLSVGPRGCGSPPRPLLQVRRLRERGLQEAARPCSALRPAGFH RQTALLCLPCQDSMSQTLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV EDDMTIPLDKKVPMLTHFHTYLYQEDWCFTESQEKDRQVLEDFPTISLEFRNLAQEYREV ISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSRLFSASQLEDPEVGQDTE LANSMGLFLQKTNIIRDYLEDTTEGRAFWPQEAWSQFAGRLEDLAQPEKLESALSCLNLL VTDALRHVPDVIAYLSRLHNQSVFNFCAIPQVMAIATLSSCYNNPMVFQGVVKIRKGQAV TLMMEATNMRAVQTIIFQYSQEILQKVSLTDPSRDKTLHILAVIQGKSTMSQSRSHHLSP MYLSAAMLLAVLSWQYISTAAAQAQGTGDV NT seq 1353 nt NT seq  +upstreamnt  +downstreamnt atggccggagcctgctgcaagtgcccggtgactctgtccgtgttcaagcgctctctctcg gtggggccgcggggctgcgggtcccctccccggcccctcctgcaggtccggaggcttcgt gagcggggcctgcaggaggccgcccgcccctgcagcgccctcagacccgcgggctttcac cgacaaacggccctcttgtgtctgccctgccaggactccatgagccagactctgcggacc tgctacgtgtatctgaaccagaccagccggagcttcgcggctgtgatccaggcgctggac ggggagttgagacatgcggtttgcatcttctacctggtgctgcgagcgctggacactgtg gaggatgacatgaccatccccctggacaagaaggtgcccatgctgactcattttcacacc tacctgtaccaggaggattggtgtttcactgagagtcaggagaaggatcgacaggttctt gaagacttccccacgatatcactggaattccgaaacctcgctcaggaatacagagaggtc atctcggatatatgtcaccgcatgggagtcgggatggccgagtttctggagaagaaggtt ggatccatgaaggagtgggaccagtactgccactacgtcgccggtctcgtcggcatcggt ttgtctcggctcttctccgcctcccagctggaggatccagaagtggggcaggacactgag ctggccaactctatgggcctgttcctccagaagaccaacatcatcagagactatcttgaa gacacaacagagggtcgggccttctggccccaggaggcgtggagtcagtttgcaggccgt ctggaggacctggctcagccggagaagctggagtcggcgctgtcctgtctcaaccttctg gtcaccgacgctctgcggcacgttcccgacgttatcgcctacctgtcccgcctgcacaac cagagtgtctttaacttctgtgccattccacaggtgatggcaatagccactctttcctcg tgctacaacaaccccatggtgtttcagggagtggtgaagatcagaaagggtcaggccgtc accctcatgatggaagccaccaacatgcgagcggtgcagaccatcatctttcagtatagc caggagatcctgcagaaggtttccctcactgacccatccagagacaagactctgcacatt ctagctgtcatccagggaaagtccaccatgtcccagtccaggagccaccacctgtctccc atgtacctgtctgctgccatgctgctggctgtgctcagctggcagtacatcagcactgct gccgcccaggcgcagggcacgggagacgtgtag

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