Oryzias melastigma (Indian medaka): 112158476
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Entry
112158476 CDS
T07439
Symbol
vsnl1a
Name
(RefSeq) visinin-like protein 1a
KO
K19936
visinin-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112158476 (vsnl1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112158476 (vsnl1a)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112158476 (vsnl1a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
EF-hand domain-containing proteins
Calcium binding proteins
112158476 (vsnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Dockerin_1
Caleosin
p25-alpha
IL3
WEF-hand
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
112158476
NCBI-ProteinID:
XP_024147652
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Position
LG24:complement(12906391..12939537)
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AA seq
191 aa
AA seq
DB search
MGKQNSKLTPEVMEDLVKNTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNNDDQISLEEFKEAAKSDPS
IVLLLQCDLQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacagaacagcaagctgactcctgaggtgatggaggacctggtgaagaacacg
gagtttaacgagcacgagctgaagcagtggtacaagggattcctgaaggactgtcccagc
ggccggctcaacctggaagagttccagcagctctacgtaaagttcttcccttacggggac
gcctccaagtttgcacagcacgccttcaggacctttgacaagaacggtgacggcaccatc
gacttcagagagttcatttgtgcgctgtccatcacctcaagaggcagctttgagcagaaa
ctcaactgggctttcaacatgtacgacctggatggagacggcaagatcacaagggtggag
atgctggagatcattgaggccatctacaagatggtcggcacggtgatcatgatgaaaatg
aacgaggacggcctgacacccgagcagagggtggacaagatcttctccaagatggacaag
aacaacgacgaccagatctcgctggaggagttcaaagaggcggccaagagcgacccctcc
atcgtattactgctgcagtgtgacctccagaaatag
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