Oryzias melastigma (Indian medaka): 112158604
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Entry
112158604 CDS
T07439
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X4
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112158604 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112158604 (usp19)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112158604 (usp19)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112158604 (usp19)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112158604 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
112158604
NCBI-ProteinID:
XP_024147795
Ensembl:
ENSOMEG00000012597
LinkDB
All DBs
Position
LG7:complement(29934115..29963084)
Genome browser
AA seq
1469 aa
AA seq
DB search
MASSGGGGDGHRVGAQQRGGSGSDVSSSKKKQKDRANQESREAKRAAADGVLAEVKKDVF
VDWKQNDNEVTVRLRCGDGVQRVNDINTNFTDTNCNVSFPDGREWSCQLQEEIEASCSRV
QYKEKGGFLHLIMHKKIPFHIWPSLKSNKKEKQAAAPVTKKEMKSVSSDSSEKLKLSSLQ
PHPPSSPSHSESRRSKAERGLKRCLKNKPCDKAPADLSGVKDGASETSTRPAAAVTPAEP
QPLEPSTKRPIVRLPKTTKGEEKSAAVNGGKTTNSRSPQTPRKDRNRAEELVSAQEVGPE
ESAANKVQPVEKRNQALDGSGAKAHVKEEHSAAAVSTNHCLKPACFNKEADSASKKQRER
TNSEVEVKPAELKSEPGPVIQQATEALPRQNQAAGLIPNSCDGEEKRDRPKEEPPLEISP
LEAPEPMVNLQSLKNDSYEKGTDLMVVNVYIKGVCRDTARVIFREQDFTLIFQTSDVNFL
RLHSDCGPNSVFKWQVKLRNLIQPEQCTYSFTPSRLDITLKKRHSQRWEGLLAPTSQGAV
GGAKVAVASSPACMDKSQPGSSQHSLPAKEEPPRVGEETPKAPKASNRGVEGGALDSVAP
RSVSEHVAITKSEPVVTTVSVTPKPTCMVQPMTHSLPASIERHEEEEEKKVCLPGFTGLV
NLGNTCFMNSVIQSLSNTRELRDYFHDRGFEAEINCSNPLGTGGRLAIGFAVLLRALWKG
THHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDG
RLDEVVAEEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLPVPLPQKQ
KVLSVFFFAKEPHKKPIKFLVSVSKENSSTAEVLESISRSVRVKPENLRIAEVSKNRFQR
VFLPSQSLDTVSPSDMLFCFELLSKDLAKERVLLIKVHQKLQVPNIPISKCAACLKPPVS
EDDKLKRCMRCYRVGYCNQVCQKTHWPSHKGLCRPNSENVGLPFMVSVPESRLSYARLAQ
LLEGYSRFSVNVFQPPFQSGRTSPETPQSRVDLPPMPACSPEAAGSGDEAVGGSSLTGAG
DLEPDGKSPPPRSLAELAQASSIHPEVSDSLSSSRTKDSGFSESISSTSCCSLDPHAEKE
TSCEKTVRPEAAVTGYQHSSESASGHASQFYIALLDSNNKEQRLDEKEDALADLPEDATV
ELVWKNNERLKEYVLVSSKELEYEEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAW
YCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCI
GQKDDMQQPPIYDLYAVINHYGGMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVE
ESQVVTRYAYVLFYRRRNSPVERPPRFLRPVGADSPSAAGAAASQAPSQSLFTTDLDPEG
PPTLTPEVSSDLFASECAAPSYSNMEEVD
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagtggaggaggtggggatggccatcgtgttggggctcagcagagaggaggc
agcggctcggacgtgtcctccagcaagaagaagcagaaggacagggccaaccaggagagc
agagaggccaaaagagcggcggcggacggagttcttgcagaggtcaaaaaagacgtgttc
gtagactggaagcagaacgataacgaggtgacggtgaggctgcgctgcggagacggcgtg
cagagagtcaacgacatcaacaccaatttcaccgacaccaactgtaatgtttctttcccc
gacggacgtgagtggagctgccagctgcaggaggaaatcgaggcctcgtgcagcagagtc
cagtacaaggagaaggggggtttcctgcacctcatcatgcacaagaagatcccttttcac
atctggccttctctgaagtcaaacaagaaagagaagcaggcagcagctccagtgaccaag
aaggagatgaaatctgtttcttcagattcatcagagaaactcaaactgtcgtcgctgcag
ccccaccccccatcatccccttcacacagcgagtcgaggcgcagtaaagccgagcgcggt
cttaagcggtgcttgaaaaacaaaccctgtgacaaggcccccgctgacctctccggagta
aaagacggagcttcagaaacgagcacccggcccgccgctgccgtcacgccggcggagccg
cagcctctggagcccagcaccaagaggcccatcgtacggctgcccaagaccactaaaggg
gaagaaaagtctgcagcagtgaacggcggtaaaaccactaacagtcggagtccacagact
ccacgcaaagacagaaacagagcggaggaactcgtcagcgctcaggaggtcggacctgaa
gagtccgctgccaacaaagtccagccggtggaaaagagaaaccaggcattagacggatcc
ggagcaaaagcacatgttaaagaggaacattcagcagctgctgtgagcaccaaccactgc
ctcaaacccgcctgcttcaacaaagaagcagactccgcctccaaaaagcagagggagcgt
acaaactctgaggtggaggtgaaacccgccgagctgaaatcggagccgggcccggtgatc
cagcaggcgacagaggcactcccgaggcagaaccaggcggctggtctgatcccgaacagc
tgtgatggagaagagaagcgggaccggccgaaggaagagcctcctctggaaatcagtccg
ctggaagctccggagccgatggttaacctgcagtctttaaagaacgactcgtacgagaag
ggcaccgatctgatggtggtcaatgtctatatcaaaggcgtttgcagggacactgccaga
gtcatcttcagagagcaggactttaccctcatcttccagacaagtgacgtgaactttctg
cgtcttcattcggactgcggacccaactctgtcttcaagtggcaagtcaaactcaggaac
ctgatccagcccgagcagtgcacttactccttcacgccgtcccgactggacatcaccctg
aagaagaggcacagccagcgctgggaggggctcctggctccaacctcacaaggtgcagtg
ggtggtgctaaggtggctgtggcctccagtcccgcctgcatggataaaagccagcccggc
agcagccagcacagcctccctgccaaagaggaacccccgagagtcggggaggagacgccc
aaggcccccaaggcctccaacaggggagtggagggaggagctctggatagcgttgctcct
cgctccgtctctgagcacgtcgccatcaccaagtctgagcccgtggttaccacagtgagt
gtgacgcctaagcccacctgcatggtccagcccatgacccacagccttcccgccagcatt
gagcgccacgaagaggaggaggagaagaaggtgtgcctccctggtttcacgggactggtc
aaccttggcaacacatgcttcatgaacagcgtgatccagtccctgtcgaacaccagagaa
ctcagggattactttcacgaccgagggtttgaggccgagatcaactgcagcaaccctttg
gggacgggaggcaggctcgccatcggcttcgccgtgctgctcagggctctgtggaaaggg
acgcatcacgccttccagccttcaaagctgaaggcaatcgtagccagtaaagccagtcag
ttcacgggttacgctcagcacgacgcgcaggagttcatggcgttcctactggacggactg
cacgaagacctgaaccgcatccagaacaaaccatacacggagacggtggactctgacgga
cggctggatgaggtggtggcagaggaggcgtggcaaaggcacaagatgagaaatgactcc
ttcattgtggacctcttccaaggccagtttaaatccaaacttgtgtgtcccatgtgttca
aaggtttccatcacctttgaccccttcctgtacctgcctgtgccccttccccaaaagcaa
aaggtgctctctgttttcttcttcgctaaggaacctcataaaaagcccatcaagtttttg
gtgagtgtgagcaaagagaactccagcacagccgaggtgctggaatccatctccaggagc
gtgagggtcaaacccgagaacctcagaatagcagaggtgagcaagaaccgcttccagcgc
gttttcctgccgtctcagtctttagacaccgtgtcgccctcagacatgttgttctgcttt
gagctgctctccaaagatctcgccaaagagagggtgctgttgatcaaggtgcaccagaaa
cttcaggttcccaacattcccatctcaaagtgcgccgcctgcctgaagcctccggtgtct
gaagacgacaagctgaagcgctgcatgcgctgctatcgagtgggctactgtaatcaagtg
tgtcagaagacgcactggcccagtcacaagggtctgtgtcgacccaactcggagaatgtg
ggtctgcccttcatggtcagcgtgccggagtctcggctctcctacgccaggctggcccaa
ctgctggaaggttactccaggttttcagtaaacgtgttccagcctcctttccagtcgggc
aggacgtctcctgagactccccagtctcgggttgacctgccaccgatgccggcgtgctct
cctgaggctgctggttctggggatgaagccgtgggcggcagcagtttgacgggagcggga
gatctggagccggatggcaaatccccgccacctcggtctctggcagaactcgctcaggcc
tcttcgatccacccggaggtgtcggactccctgtcctcctcccggactaaagattcaggc
ttctcagagtccatctcctccacctcctgctgttccctcgacccccacgctgaaaaggag
acgtcctgtgagaagacggtgcgaccagaagctgcagtaacggggtatcagcattcgagt
gaatcggcgtccggtcacgccagtcagttctacatcgcactgctggactccaacaacaag
gagcagaggctcgatgagaaagaggacgccctggcagatctccctgaagacgccacggtg
gagctggtgtggaaaaacaacgagcgtctcaaggagtacgtgctggtgagctccaaggag
ctggagtacgaggaggacccgggctcgctcagcgagacggctagagcgggacacttcacc
ctggagcagtgcctgaacctcttcaccaagccggaggtgctggcgccagaggaggcctgg
tactgtcccaaatgccagcagcaccgtgaagcttcaaagcagctgcttctgtggcgtctg
cccaacgtcctgatcatccagctcaaacgtttctccttcagaagcttcatctggagggac
aagatcaacgacatggtcgacttccctgtcagaaatttagatttgagcaagttctgtatc
ggccagaaggacgacatgcagcagccccccatctacgacctgtatgccgtcattaaccac
tacggagggatgatcggaggtcactacacagcttacgctcgactgccgagcgacaagaac
agccagcgcagtgatgttggctggcggctgtttgatgacagcactgtgaccatggtggag
gagagccaggtggtgacgcggtacgcctacgtcctgttctaccggcgccggaactccccc
gtggagcggccgccacgcttcctcagacctgttggagccgattcaccgtctgctgcggga
gccgctgccagccaggctcccagccaatccctgttcaccacagacctggatcccgaaggc
ccgcccactctgacccccgaggtgtcctctgacctcttcgcctctgagtgcgcagcgccg
tcgtacagcaacatggaggaggtggattag
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integrated database retrieval system
