KEGG   Oryzias melastigma (Indian medaka): 112158644
Entry
112158644         CDS       T07439                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112158644 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112158644 (bcas2)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112158644 (bcas2)
Spliceosome [BR:oml03041]
 Complex B
  Other components
   Prp19 complex
    112158644 (bcas2)
 Complex C
   Prp19-CDC5 complex
    112158644 (bcas2)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112158644 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile Flagellar_rod RRP36 EHN THOC7
Other DBs
NCBI-GeneID: 112158644
NCBI-ProteinID: XP_024147854
Ensembl: ENSOMEG00000016837
UniProt: A0A3B3CBI4
LinkDB
Position
LG7:complement(25734733..25737422)
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPMPEFSA
FETEIMRNEFERLAARQPMDLLSMKRYELPAPTSGQKNDITAWQECVNNSMAQLEHQAIR
IENLELMSHYGTNAWKVYNDNLAFMIEMAQKELHKFRKKIQDLNWQRKNDQLAAGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVSHLRQQQGEENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacggcctcggtagccggtgaagtgtttgttgatgcgttgccgtattttgat
caaggttatgacgcgccgggagtcagagaagcggccgctgcgttggtggaagaggagacc
agaagatatcggccaaccaagaactacctgagctaccttcccatgccggagttctcagcg
tttgagactgaaattatgaggaatgagtttgagcgattagctgctcgccaaccaatggac
ctcctcagcatgaagaggtatgagctgccagcccccacatcaggacagaagaacgacatt
accgcctggcaggagtgtgtcaataactccatggcccagctggagcaccaggccatccgc
atagagaacctggagctcatgtcgcattatggaacaaacgcatggaaagtctacaacgac
aacctcgccttcatgatcgaaatggcccaaaaggaacttcacaagttcaggaagaagatt
caggatctgaactggcagcgcaaaaatgatcagttggcagcaggcgctaagctgcgagag
ctggagtccaactgggtgtcactggtcagtaaaaactacgagatcgagcgagccatcgtc
cagctggagaacgaggtgtcccacctgaggcagcagcagggggaggagaacaaggaaaac
atccgacaggacttttag

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