Oryzias melastigma (Indian medaka): 112158724
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Entry
112158724 CDS
T07439
Symbol
hoxc10a
Name
(RefSeq) homeobox protein Hox-C10a
KO
K17444
homrobox protein Hox-C10
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112158724 (hoxc10a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112158724 (hoxc10a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112158724
NCBI-ProteinID:
XP_024147980
Ensembl:
ENSOMEG00000016066
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Position
LG7:8932131..8979585
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AA seq
322 aa
AA seq
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MSCPNNIAPGNFLMDSLMGGSSSFRSEGYPSNPGMYIHSAAEYGYSVMRNSGKVGPSSLS
KADEVAPSGVSLGGFQDAPYLSSWTPVSKSSRDEQPVAQCLQPCSIPPGSVKEEAFCCLY
QDDSNKGKQTTEHTTYIRLGDNGSRPGQTVASSSRCFQVYERPQREEPQFPPGFSLTHLA
PSAESRAESTISCSTSAQETARSNTEERQSRKEEKAKSSSCSDNSDAELKDDSSAEKTTE
SWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR
MKLKKLNRETREREQGAVYNYS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtccgaataacatagcgcccggtaacttcctgatggattcgctgatgggagga
tcatcttcctttaggagtgagggttatcccagcaaccctggaatgtacatccactcagct
gcagagtacggatattcagtgatgagaaactctggaaaggttggaccatcttcactttcc
aaagcagacgaggttgctccaagcggggtgtcgctcggcggcttccaggatgcgccctac
ctgtcgtcgtggaccccggtctccaaatccagcagggacgagcaacctgttgcccagtgt
ttacagccctgctcgattccaccggggagcgtcaaagaagaggcgttttgttgcctctat
caggatgacagcaataaggggaagcagacaacagagcacaccacttacatccggcttgga
gacaatggcagccggcctggacaaactgtcgcctcttcaagccgctgtttccaggtgtac
gagaggccgcagcgggaggagccgcagttcccccccggtttctctctgacccacttggcg
ccttctgcggaatcgagagcagaatccacaataagctgcagcacatctgcgcaagagacg
gcgcgttcaaacacagaggagaggcagagcaggaaggaagagaaggccaagagcagtagc
tgctcagataactcggacgcagaattaaaagatgactcatccgcggaaaagacaacggaa
agctggttaaaagccaaaagtggaaggaagaagcgctgcccctacacaaagcatcagacg
ctggagctggagaaggagttcttgttcaacatgtatctgtctcgggagcgccgcctggag
atcagccggagtatcaacctgaccgacagacaggtcaagatctggttccaaaacagacgc
atgaagctgaagaagctgaacagggagacccgcgaaagggagcagggcgcagtttataac
tactcctga
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integrated database retrieval system