Oryzias melastigma (Indian medaka): 112158745
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Entry
112158745 CDS
T07439
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
112158745
NCBI-ProteinID:
XP_024148014
Ensembl:
ENSOMEG00000006406
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Position
LG23:14537084..14718100
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AA seq
911 aa
AA seq
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MASVSAPAQAAQVSSAPLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALAR
RAAQGQPDIKDTPDEPWAFQAREFLRKKLIGKEVCFNVEIKTAIGREYGMVYLGKDTTGE
NIAESLVNEGLATVRREGIRGNNPEQARLCELEDQAKASKKGLWSEGGGTQTIRDLKYTI
ENPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTET
PEPFAAEAKFFTESRLLQRDVQIILESCPNQIILGTILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAAERSAKERKIRIWKDYVAPTANLDQKDRQFVAKVMQVVNADAMLVKL
NSGEHKTIHLSSIRPPRNEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTV
DYIRAATGPGESTPAFPERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDEL
LAAEARAIKNGKGLHSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEHVFSGSR
LKLYMPKETCLITFLLAGIECPRSARNIPGGMQVAEPFSDEATRFTKELVLQREVEVEVE
SMDKAGNFIGWLHIEGLNLSVALVENALSKVHFTAERSPYYKTLVSAEEQCRKRKEKIWA
NYEEKPVEEVVHLSEEKERVPNYRPVFVTEISDNLHFYAQDVETGAQLETLMETMRAEIA
AHPPVEGSYAPRRGDYCLAKFADGEWYRARVEKVESPAKVHVFYIDYGNREVVPSTRLAA
MPPAFSTRTLPAQATEYTFAFIQVPQDEDARADVVDCIVRDIQNSQCLMNVEYSGASCPH
VTIQFGDTKDDVGLGLVKEGLVMVDVRKEKHLQKMVTEYLNSQESAKSARLNIWRYGDFR
ADDADEFGYRR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggctccagctcaagcagctcaggtttcctcagctcctttgcaaagg
ggaatagtaaaaatggtcctgtcaggttgtgccatcattgttcggggtcagcctcgaggc
ggcccgcccccagaacgccagatcaacctcagcaacattcgagccggagcgctagcacgg
cgagcagcacagggccaacccgacatcaaggacacccctgatgagccatgggccttccaa
gcccgagagttcctgagaaaaaagctcatcgggaaagaagtgtgcttcaacgtggaaatc
aagaccgccatcggccgcgagtacggcatggtttacctgggaaaagacacaacaggcgag
aacattgcagagtccttggtgaacgaaggtctcgccacagtccgaagggaaggaatcaga
gggaacaatcctgaacaggcccgactctgtgagctggaggaccaggccaaggcttccaag
aaaggcttgtggagcgagggaggaggcacacagaccatccgggacctcaagtacaccatc
gagaatccccgcaattttgtcgactctttgcatcagaaacccatcaatgccatcatagag
cacgttcgtgacggcagcgttgtccgtgccttgctgcttcctgactactatctggtcacc
gtcatgctgtctggtgtcaagtgtccgacgttcaagagggaagcagatgggacggaaaca
cccgagccgtttgcagcagaagccaaattcttcactgaatcgcgactcctgcagcgggac
gtgcagatcattctggagagctgccccaaccagatcatcctgggcaccatcctccacccg
aatggaaacatcacagagctcctgctgaaggaaggctttgcccgctgtgtggactggtcc
atggctgtttacacccagggagctgagaaactcagagctgctgagcgatctgctaaagag
cgcaagattcgcatctggaaggactacgtggctcccacggccaacctggaccagaaagac
cggcagtttgtagccaaggtgatgcaagtggtcaacgctgacgccatgctcgtcaaactc
aactccggagaacacaaaaccatccacctgtccagcattcgaccccccaggaatgaagga
gaggagaaaaacaaggacaaagacaagcgattccgtcctctctatgacatcccctacatg
tttgaggcccgtgaattcctccggaagaagctcatcggtaaaaaggttaatgtgacggtc
gactacatcagagcagctacaggtccaggagaaagcacgcccgccttcccagaacgcacc
tgtgccacagtcacaatcggtggcataaacatagcagaagccctggtcagcaaaggcctc
gccacagtcatcagatacagacaggatgacgaccagcgctcctcccactacgatgagctg
ctcgccgcagaggctcgggccatcaagaacgggaaagggttgcacagcaagaaggaggta
cccatccacagagtggctgacatctctggggaaacgcaaaaagccaagcagttcctgccc
ttcctgcagagggcaggccgctcggaagcagtggtggaacacgtcttcagcggctcccgt
ctaaagttgtacatgcccaaagaaacctgcctcatcacattcctcctggctggcatcgag
tgtccgcgtagtgcccggaatatccccggggggatgcaggtggccgaacccttcagcgac
gaagccacgcggtttaccaaagagctggtgctgcagagagaggtggaggttgaagtggag
agcatggacaaagccgggaacttcattggctggctgcacatcgagggcttaaatctgtct
gtggcgctggtggaaaatgctctgtccaaggtccacttcacagcagagcgcagcccctac
tacaaaactctggtctctgcagaagaacaatgccggaagaggaaagaaaagatctgggcg
aactacgaggaaaaacccgtggaggaagtcgtgcatctctcagaggagaaggaacgcgtg
cccaactacagaccagtgtttgtcactgaaatctcagacaaccttcacttttacgcccag
gatgtagaaacaggagcccagctggagaccctgatggagaccatgagagcagagatcgcc
gctcatccacctgtggaaggatcttatgctccacgcagaggagactactgcttagccaag
tttgcagatggagaatggtacagagccagagtggaaaaagttgagtcaccagcgaaggtt
cacgtcttctacatcgattatggcaacagagaagtcgtgccatccacccgtctggccgcc
atgcctcctgccttcagcaccaggaccctgccagcccaggccaccgagtataccttcgcc
ttcatccaggtcccacaggacgaggacgctcgtgcagatgtggtggactgcatcgtgcgg
gacatccagaacagccagtgcctgatgaacgtggagtattcgggcgccagctgcccgcac
gtcacaatacagtttggggacaccaaggatgacgtgggcctgggcttggtcaaggagggc
ctggtcatggtggacgtccgcaaggagaaacacctgcagaagatggtgacggagtacctg
aacagtcaagaatctgccaagagtgccaggctcaacatttggcgctacggagacttccgc
gccgacgacgcagacgagttcggctacagacgctaa
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