Oryzias melastigma (Indian medaka): 112158785
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Entry
112158785 CDS
T07439
Symbol
rerea
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112158785 (rerea)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112158785 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112158785
NCBI-ProteinID:
XP_024148107
Ensembl:
ENSOMEG00000021897
LinkDB
All DBs
Position
LG7:complement(6470025..6614400)
Genome browser
AA seq
1539 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDKREAGKSRRQDGDRGDRESESSRPRRSCTLEGGAKNYAES
EHSDDEDNDNGSTGGGSGTAEEAGKKGKKKMPKKKSRYERTENGEITSFITEDDVVYRPG
DCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNEND
SGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFRARIDSFFYIL
GYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGHAVTENEELVWMPGVNDCDLLMY
LRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPK
LIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASCRAH
RRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHC
FSTTSKDWHHGGRENILLCTDCRIHFKKYAELPPIEKPVDPPPFMFKPVKEEEDGLSGKH
SMRTRRNRGSMSTLRSGRKKQPASPDGRASPTNEDLRSSGRTSPSAASTDSTDSKTDSMK
KPSKKIKEEAPSPMKSTKRQREKGASDSEETERATAKKSKTQELSRPDSPSECEGEGEGE
SSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQLLQSQHPAVIQCQ
PGTSTASAAPPPPPTSNPLLPPQVPTAAASASLPPQPLAQAGPMSLIQSGASLHPQRLPS
PHSPLTQAPSSGPTVPPQSLPSPHHGPLPPVPHPLQPAPPHLPHPHSMTPQGFPVGPSQV
PPPSVPSQSQQRPHSPPSQSQSSSQSGGQPPREQPLPPATMSVPHIKPPPTTPIPQMPTP
QSHKHPPHVPAPPFLPMPSNLPPPPALKPLSSLSNHHPPSAHPPPLQLMPQGQQLQPPPA
QPPVLTQSQSLPPSASHQPPAAPPLPHTVSHPTAGPPQPPFSSHPFSTVLPPTGPPPSSS
NSMPSLQPPPPSSSSISMPLPASVPCAGPGPSIPPVNIKEEPLDEPEEPESPPPPQRSPS
PEPTVVNTPSHASQSARFYKHLDRGYNSCARTDFYFTPLASSKLAKKREEALEKAKREAE
QKAREEKEREREREKEREREREREKEVERAAKASSSSHESRMGEPPMAGPAHMRPPFDGP
PTTIAAVPPYIGPDTPALRTLSEYARPHVMSPSNRNHPFFVSLNPADPLLAYHMPGLYNA
DPAMRERELREREMREREIRERELRERMKPGFEVKPPEMESLHPSTNPMEHFVRHGAITL
PPMPSPHPFASFHPSLNPLERERLALVGPQLRPEMSYPERVAAERLHAERMATVANDPIA
RLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGGECLVCPPGSGSHPLAVDPLAAGPHLA
RFPYPPGTIPNPLLGQPPHEHEMLRHPVFGAPYPRDLPGGIPPPMSAAHQLQAMHAQSAE
LQRLAMEQQWLHGHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaggaaagggagaaagaacgcgaccgagacagggaccgggac
aaacgggaggccggtaagtcccggcggcaggatggagatcgcggcgaccgggaaagtgag
agctccaggccccggcggagctgtacgctagaaggcggagccaagaactatgcagaaagc
gagcacagcgacgatgaggacaacgacaacgggagcacaggcggaggcagtggtacagcc
gaggaggctggcaagaagggcaaaaagaagatgcctaaaaagaagtcacgctatgagcgc
acagagaacggagagatcacatccttcataactgaggatgatgttgtttacagacctgga
gattgtgtgtacattgagagtcggcggcccaatactccttacttcatttgtagcatccaa
gacttcaagctgagcaaacgggaccatctgctgatgaatgtgaaatggtactaccgccag
tcagaggtgcccgactccgtgtaccagcacctggtgcaggatcgcaacaacgagaacgac
tcgggccgggagctggtcatcacagacccagtggtgaggagtcgagaactcttcatctcc
gactatgtagacacttatcatgctgctgctctcagggggaagtgcaacatttcccatttc
tctgatatttttgctgcccgggagttcagagctcgcatcgactcctttttctatatcctc
ggatacaacccagagaccaggcggttaaacagcactcaaggggaaatccgagtcgggccc
agtcatcaggccaagctcccagagcttcaacctttcccatctcctggtggccacgccgtg
actgagaatgaggagctggtctggatgccaggagtcaacgactgtgaccttctcatgtac
ctcagagctgcaaggagcatggctgccttcgcagggatgtgtgatggaggttcgactgaa
gatggctgtctggcagcctcacgagatgacactacattaaacgcacttaatactcttcat
gagagcagctacgatgcaggcaaagctctgcagcgcctggtgaagaagccggtacctaag
ctgatagagaagtgctggtctgaggatgaagtgaagcgcttcattaaagggttgaggcag
tttggaaaaaactttttcaggatccggaaagagctgctgcccaacaaagaaacgggagag
ctcatcacattttactactactggaagaagactccggaggcagccagttgtcgagcccac
cgcaggcatcgccggcagcccgtcttccgccgcattaagacacgaactgcttcaactccg
gtcaacaccccctcacgacccccatccagcgagttcttggacctcagctcagccagcgaa
gatgactttgacagtgaagacagcgagcaggagctgaaaggctacgcgtgccgccactgt
ttcagcaccacctcaaaggactggcaccacgggggccgggagaacatcttgctgtgcacc
gactgccgcattcacttcaagaagtacgcggagctgccccccatagagaagcctgtggac
cctcctccatttatgttcaaacctgtcaaggaggaagaggatggactcagcgggaagcat
agcatgaggaccagacggaaccgaggctcgatgtcaacactacgaagtggtcgcaagaag
caaccagctagtcctgatggccgagcctcgcctaccaacgaggacctgcgctccagtgga
cggacttcacccagcgccgcaagcaccgacagcaccgacagcaagacagactccatgaag
aagccaagcaaaaaaatcaaggaggaggctccttcacctatgaaaagcaccaaacggcaa
agagagaagggagcgtcagactccgaggagactgagagggccactgccaaaaagtccaaa
acacaagagctgagtcggccagactccccctcagaatgcgagggcgagggggagggagag
agctctgatgggcgcagcatcaacgaggagctcagtagcgatcccaaagacattgaccag
gacaaccggagctcctcccccagcatccccagtccccgcgacaacgagagcgactcggat
tcctctgctcagcaacagcagctcctgcagagccagcatcccgccgtcatccagtgtcaa
ccaggcacctccactgcctctgcagcgccccctccacctccaacctcaaacccgctgctg
cctccgcaggtccccactgcagctgcttccgcctcactacctcctcagcctctggcacag
gctggccccatgtctctcatccagtctggagcatcgcttcaccctcaaaggctgccttct
cctcactcacctctgactcaggctccatcttcaggccccacagtcccacctcagtctcta
cccagcccacatcatgggcccctgcctccagtgccacacccattacagcctgccccccca
catctgcctcaccctcactccatgacccctcagggattccctgtgggcccctctcaggtt
ccacctccctcagtccccagccagtcccagcagaggcctcactcgcctccttctcaaagc
cagtcatcttctcagagtgggggccagccgccacgggagcagcccctacctcctgcaacc
atgtctgtacctcacatcaaaccccctcccaccacacccatccctcagatgcccacccca
cagtctcacaaacatccgccccacgtgccagcgcctcccttccttcccatgccttcaaac
cttcctccacctcctgctctgaagcccctcagctccttatccaaccatcatcctccatca
gcacacccgcccccgctgcagctcatgcctcaggggcagcagcttcagcctcctccagcc
cagcctccagttctcacccagtcacagagccttccaccgtcagccagccaccagcctcct
gctgctcctcctctaccgcacaccgtctcacaccctacagccgggccgccgcagccgccc
ttctcctctcatcctttcagtacagttctacctccaaccggcccccctccatcctcatca
aactctatgcccagtctccagcctcctcctccttcctcctcttctatctccatgcctctc
cccgcctccgtcccgtgtgctggtcccggaccatcaatcccaccggtgaacatcaaggag
gagcccctggatgaaccagaggaaccagagagccccccacccccacagagaagcccctcc
cccgagcctacagtggtcaacacgcccagccatgccagccaatctgcacggttctacaag
cacctggaccggggttacaactcctgcgctaggacggacttttacttcactccacttgct
tcatccaaactggccaaaaagcgggaagaggcgctagagaaagccaagagggaagcggag
cagaaggctcgggaggagaaggagcgagaaagggagagggaaaaggagcgggaaagagag
cgggagcgtgagaaggaggtggagcgtgccgcgaaagcctccagctcgtctcatgaaagc
agaatgggggaacctcctatggctggccccgcccacatgcgaccccccttcgatggcccc
ccaactacaattgcagctgtgcctccgtacattggccccgacacccctgccttacgcaca
ctcagcgagtacgccagaccccacgtcatgtcgccgagcaatcgaaaccaccccttcttt
gtgtcgctcaaccccgccgacccgctgctggcctaccacatgccaggcctgtacaacgcc
gaccccgccatgcgggagcgcgaactgcgagagcgggagatgcgtgagagggaaatccgt
gagcgggagctcagggaaaggatgaagccgggctttgaagtcaagccaccagagatggaa
tcactccacccctccacgaatcccatggagcacttcgtcaggcacggcgccatcactctg
ccccccatgcccagccctcacccatttgcctctttccacccgagcctgaaccccttagag
cgcgagcggctagccctcgtggggcctcagctgcggccagaaatgagctaccccgagcgg
gtggccgctgagagactccacgccgagaggatggccaccgtggccaacgaccccatcgcc
cgtctgcagatgttcaacgtcacgccgcatcaccaccagcactcacacattcactcccat
ctgcacctccaccagcaagacccgctacaccaaggtggtggtgaatgtcttgtgtgtcct
ccaggctcggggtcccaccccctggcagtggatcccctggcagccggaccccacctggct
cgcttcccctacccacccggcaccatccccaaccccctcctgggtcagccaccgcacgag
cacgagatgctgcgccaccccgtcttcggtgctccgtacccacgggacctaccaggagga
attccaccacccatgtcagcggcccaccagctgcaggccatgcatgcacagtcagcagag
ctgcagcggctggcgatggagcagcagtggctgcatggacaccacatgcatggaggacct
ctgcccggccaggaggactactacagccgtctgaagaaggaaagcgacaagcagctgtaa
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integrated database retrieval system
