Oryzias melastigma (Indian medaka): 112158851
Help
Entry
112158851 CDS
T07439
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112158851 (pwp1)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
Other 90S particles
112158851 (pwp1)
Pre-60S particles
Other pre-60S particles
112158851 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112158851
NCBI-ProteinID:
XP_024148254
Ensembl:
ENSOMEG00000010736
LinkDB
All DBs
Position
LG23:11655599..11659633
Genome browser
AA seq
494 aa
AA seq
DB search
MSSQITCVGWVRRGVAKETPDKVELSQDELQRIITEAKEELGDLAAEDGEDDDDEGMPPD
PNPVNETPVAAESPNDDHDEGVEEDDELAEYGLDKYDEEDAATANLGDSLAGLTVFCSNQ
EDPYITIKDTDQYEREDFQIKPSDNLILAGKAEKDCCNLDIYVYNSEEDSLYVHHDILLP
AYPLCVEWLNFDPNPEERRANYVAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKASKKKKK
SKKAAAAEPVEGHTDAVLDLSWNKLVKNVIASGSADDTVVLWDLTHCKPATTLRRHTDKV
QTLAFHPFEAQSLISGSYDKTAVLYDCRSPDSSHRTWRFSGQVERLVWNHFSPCNFLAST
DDGFVYCLDARSDKPVFSLKAHDEEVSGLDLSSQIKGCLVTASADKHVKVWDILGNKPNL
VHSRDMKMGVLFCSSCCPDLPFVYAFGGQRDGLRVWDISDVATVAEVFNSRERLVVNTGP
QASSSAATTDMEVS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagatcacgtgcgtgggctgggtgaggcgtggcgttgccaaggaaactcct
gacaaagttgagttaagccaagatgagcttcagcgaatcatcaccgaggcaaaagaagaa
ctgggggatcttgcagctgaagatggagaagacgacgatgatgaaggaatgcctcctgat
ccaaaccccgtcaatgaaacccctgttgcagctgaaagtccaaatgatgaccatgacgaa
ggagttgaggaagacgatgagctagccgagtacggccttgacaaatacgatgaagaggat
gcagctaccgctaatcttggtgacagtctggccggcctcacagtgttctgctcaaatcag
gaagatccttacattaccatcaaagatacagaccaatatgagcgagaagacttccaaatt
aaaccctctgacaacctgatcctggcaggaaaagcagagaaagactgctgcaatttagat
atttatgtttacaactctgaggaggactctctttacgtccaccatgacatcctgctgcca
gcgtatcctctgtgtgtggagtggctgaactttgatccaaaccctgaagaaagacgagct
aactacgttgccgtgggcaacatgacccctcaaattgatgtgtgggatctggatgtcgtg
gactgtttagagcctgttttctctctggggagcaaaaaagcctccaagaagaagaagaag
agcaagaaagctgcagctgcagagcccgtcgagggccacacggatgcagtgcttgattta
tcttggaacaagttggtcaagaacgtgatcgcgagcggatctgcagacgacaccgttgtt
ttgtgggatttgactcactgcaaaccagccacaactctccgtcgacacactgataaggtt
caaacattggctttccacccatttgaggctcagagtttaatatcagggtcttacgacaaa
acagcagtcctttacgactgtcggagtccagacagtagccatcggacctggaggttcagc
ggtcaagtggagcgtcttgtctggaaccacttctcaccctgcaacttcctggcgagcaca
gatgatggttttgtctactgtttggacgcacgttccgacaaaccagtgttctcactcaag
gcccacgatgaagaagtttcaggcctggacctcagcagccagattaaaggatgtctcgtc
acggcctcagctgataaacatgttaaagtttgggatattttaggcaacaaacccaacttg
gtgcactcgagggatatgaaaatgggagtgctgttctgttcttcgtgttgccctgacctg
cccttcgtctacgcctttggggggcagagggacggcttacgagtttgggatattagtgat
gttgcaactgtggccgaagtgtttaacagtcgggagcgattagtggtgaacacaggacca
caggcctccagctctgcagccactacagacatggaggtatcctag
DBGET
integrated database retrieval system
