Oryzias melastigma (Indian medaka): 112158862
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Entry
112158862 CDS
T07439
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112158862 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112158862 (lamb2l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
EzrA
Motif
Other DBs
NCBI-GeneID:
112158862
NCBI-ProteinID:
XP_024148270
Ensembl:
ENSOMEG00000012451
LinkDB
All DBs
Position
LG7:complement(30025954..30105341)
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AA seq
1839 aa
AA seq
DB search
MSIMITALSLLMFALNAAGQELPSSPHGCTEGSCYPATGNLLIGRAVNLSATSTCGLNGP
EQYCIVSHLQEPDKCFECDSQRQYDPLRHRNSHRIENVIYLSDRSGDRTWWQSVSGKEDV
SLRLNLEAEFHFTHLIMMFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPGIPAKG
LHHINDVVCEERYSDIEPSTNGEVIFKVLDPSIPVKDPYSLEIQELLRITNLRINFTKLN
TLGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVLTRESGMIHGRCVCK
HNTKGLNCERCRDFHHDLPWRPAEAENPHTCRECNCNGHSNQCHFDMAVYLATGNVSGGV
CDNCLHNTVGRNCEMCQPFYYQDPNRDVRDPQVCILCDCDPVGSLDGGVCDSHTDLDMGM
IAGQCRCKANVKGMRCDDCKVGYYGLSQNDPLGCQPCNCDQRGIIRVGDPCDQISGDCSC
KRYVTGRYCDQCLPEYWGLSNDQFGCRPCECDFGGSLNNRCMMGNGQCDCRRHLIGRQCS
EVQPGYFCAPLDYYKYEAEDANGRSPTDSALRGKVRPQAADDCIQHLSNQARRHRRHRRV
SSSQQYHTALRRIRQLQQTPDVTTVNREHTPGVVVTWTGPGFARVKDGAGLVFSIDNIPH
AMEYHIMLRYEPESPEDWEAVVSITSVNLPSSLRCGNLLPTEQLYTETLLHQNRYIQMSR
PFCFEPNNRYVVAIRFQRHGVTHRHLTAFILIDSLVLIPKYTELPGFQGSELQAKQNKED
MVRYMCLDSFMITPMPLLADMCSKLICSISSIIHNGALPCQCDLQGSLSGECQRVGGQCR
CKPNVMGRRCDQCAPGTYGFGVNGCTACNCHPDGSSSHQCDPLTGQCPCRQGATGRQCSN
CQPGQWGFPNCRRCQCNGHADLCDPQTGECRGCQDNTAGHLCERCENGFYGNPVLGSGER
CRPCPCPGNPGSNHFNGHSCHSDYAANQIICSCKQGYTGSRCDQCAPGYYGDPERPGGQC
LPCRCNNNIDPNDPESCDRRTGRCLRCLYHTHGQFCSQCEPGYFGNAIVQDCRRCTCVSA
GTRQSACSEGHCHCDPESGACPCRENVQGRVCDQCAPNHWNFGNERGCEPCNCDPQNSLG
THCNMFTGQCHCRPGFGGKNCTQCEQFYWGDPQVECRDCNCHWQGSNLQVCDRATGQCDC
QAGKAGQRCDECARGFTGAFPNCVQCHQCFQLWDDIICQLKRDLDHIHFTAQRIQENGVM
PGIGDSRIRELEEKLKQVTDLISSGRNDSIHQLIGQTIDDLRAEIAVTDGRLMGISQEMN
KTAEDEKSLKRALTDMEDELRDLNYTAANIRLHHLPSGFADQFERVKKYYRESLQAEEKC
NASVSGPLSPVEQSNETRKITEELLEARKDEFLKNVTANNQSLNDLQQEVHNLDKDIQDL
SQKVCGGHSNASVNGSCPDSQCGGAGCRDDQGDLVCGGEGCNGTVSISMAALNQSQNTMD
SLMAASDELLNISKKLQEIANLTQDVKNQTMKTLEKAQEKKKHIEDNNKNLKDFIKMIKD
FLTEDAADPESIEKVALQVLSITLPFNQTTLDKITTEIRDSLSNLTNVEAILNETADHVN
KAKELLSKAKDAKALAERVKDEANSTKQALSASDKAIEKATAALKEAQSNLNNTQNATAE
VDLQLLQLEGKQMDIMMRLQNLSAEAEALRNKTEMNRKMAEDALALANNATLRASSLEQS
FNNTEERYKELLQKVESIGDSGSLDSIQQKVRTMKSDAENLLNKAKDGIKQLDNLSNTFK
ENEDRMQKQLEELEDLKQNATDVRDELRKKMQAFSACQV
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatgatcacagcgctgagcctcctcatgtttgctctgaatgcagctgggcaa
gagcttccatcgagccctcatggctgcacggaaggaagctgttaccccgcaacaggaaac
ctcctgattggacgagctgtcaacctatctgccacctccacatgcggcctaaacggaccc
gagcagtactgcattgtcagccatctgcaggagccggacaagtgcttcgagtgtgactcg
cagcgccagtacgaccctctgcgacacagaaacagccaccgcatcgaaaacgtgatctac
ctgagtgaccgcagtggagaccgcacctggtggcagtctgtcagcggtaaggaggacgtc
agcctgaggctgaacctggaggctgagttccacttcactcatctcatcatgatgtttaag
actttccgacctgcagctatgatcatcgagcgctcggcagatttcggcaggacgtggcgc
ccctaccgctactttgcctccaactgcaccaggaccttccccggcatacccgccaaaggc
ttgcaccacatcaacgacgtggtctgcgaggagcgctactccgacatcgagccgtccact
aacggggaggtcatttttaaagttttggatccatctattcctgtgaaagacccctacagc
ttggaaattcaagaactgttgcgcatcaccaacctgcgtatcaacttcacaaagctaaac
accttgggagacgacctgctggaccgccgctctgatgtcctgcaaaagtattactatgcc
atctacgagctggtggtcagggggagctgcttttgctacggacacgcgtcggagtgcgcc
ccggtgccgggggtcctcacccgggagagcggcatgatccacggtcgctgcgtttgcaaa
cacaacacgaaagggctgaactgcgagcgctgcagggacttccaccatgacctgccgtgg
agaccggcagaggcggagaacccacacacctgcagagagtgtaactgcaatggtcactca
aaccagtgccacttcgacatggctgtgtacctggccacgggcaacgtcagcggaggggtt
tgtgacaactgtctacacaacactgtgggacgcaactgtgagatgtgtcaaccattctac
taccaagaccccaacagggacgtcagagacccacaagtttgtatcttgtgtgactgtgac
cctgtgggatcgttggacggcggcgtgtgtgacagccacaccgacctggacatggggatg
atcgcaggccagtgtcgctgcaaagccaacgtgaaaggcatgcgctgcgatgactgcaaa
gtgggttactacggcctcagccagaacgacccgctgggatgccagccttgcaactgtgac
cagcgcggcatcataagggtgggagatccatgtgaccagatcagcggggattgttcctgt
aaacgatacgtcaccggacgctactgtgatcagtgtctgccggaatactggggactcagc
aacgatcagttcggctgcagaccctgtgagtgtgactttggaggatccctcaacaacagg
tgcatgatgggaaatggccagtgtgactgcagaaggcatctaattggtcggcagtgttca
gaggtgcaacctgggtatttctgcgcacccctcgactactacaagtatgaggcggaggat
gctaacggccgctctcccacagactccgccctgcggggaaaagttcgtcctcaggctgca
gacgactgcattcaacatcttagcaaccaggcgcggaggcatcggcgccacagacgggtc
tccagctcgcagcagtaccacacggcacttagacgcatccgacagcttcagcagacaccc
gatgtgacgactgttaacagagagcacactcccggcgtggtggtgacctggaccggaccc
ggcttcgctcgtgtcaaagatggcgccggtttggttttctcaatcgacaacatccctcac
gccatggagtaccacatcatgctccgctacgagcccgagtcgccagaggactgggaggct
gtagtcagcattacctccgtaaacctgccctccagtctacgatgcggcaaccttcttcca
accgagcagctctacacggagactctgctgcaccaaaacagatacatccagatgtccaga
ccgttttgctttgagcccaacaacagatatgtggtggccatcaggttccagcggcatggc
gtcacgcacagacacctgacggccttcatcctcatcgactctctcgttttgattcctaaa
tacaccgagcttcctggcttccaaggcagcgagcttcaggcaaagcagaacaaagaagac
atggtccgctacatgtgtctggactccttcatgatcactcccatgcccctcctggcggac
atgtgctccaagctcatctgcagcatctcctccatcatccacaacggagctctgccctgt
cagtgtgaccttcagggttccctcagcggcgagtgccaacgagtgggagggcagtgccgc
tgcaagcccaacgtgatggggcgacgctgcgatcagtgcgccccggggacgtacggcttt
ggagtgaacggttgcaccgcttgtaattgccaccccgatggctcttcgagtcaccagtgt
gaccccctcacggggcagtgcccctgcaggcagggggccaccggccgtcagtgctccaac
tgccaaccgggtcagtggggcttcccaaactgcaggcgctgtcagtgcaacggccacgca
gacctctgcgacccccaaacaggagaatgcagaggctgccaggacaacaccgcaggacac
ctgtgtgaacggtgtgagaacgggttctatggaaacccggtgctcggctccggagaacgc
tgtcggccctgcccctgcccggggaacccaggatcgaaccacttcaatggacattcctgc
cactcggactacgctgctaatcagatcatatgcagctgcaaacaaggctacactggttca
cgctgtgaccagtgtgcgcctggttactacggcgaccccgagcgacccggaggacagtgt
ctcccgtgccggtgcaacaacaacattgaccccaacgaccccgagtcatgtgaccgcagg
actggccggtgtctcaggtgtctataccacacccacgggcagttctgctcccagtgtgag
cccggttactttggaaatgccatcgtccaggactgcagacgctgcacctgtgtttctgct
ggaacccgtcagtctgcgtgcagcgaaggacattgtcactgtgaccccgagagcggcgcc
tgcccctgcagggagaacgtccagggccgcgtctgtgaccagtgcgccccaaaccactgg
aacttcggcaacgagagaggctgcgagccctgcaactgtgacccccaaaactccctggga
actcactgcaacatgttcacaggccagtgccactgccgtccaggttttggagggaaaaat
tgcacccagtgtgagcagttctactggggagacccgcaggtggagtgtcgagattgtaac
tgccactggcagggctctaacctacaagtgtgtgaccgagcaaccggacagtgtgactgt
caagcggggaaggcgggccagaggtgtgacgaatgcgctcgcggcttcacgggagccttt
cccaactgcgttcagtgtcaccagtgcttccagctgtgggacgacatcatctgccaactc
aagagggacctggaccacatccacttcacggcgcagagaatccaggagaacggggtcatg
ccgggaatcggggactctcgcatccgcgaactggaggagaagctgaagcaggtgacggat
ctgatcagttcaggcaggaacgacagcatccatcagctgattgggcaaaccattgatgac
ctcagggctgagatcgctgtcactgatggacgcctgatgggcatcagtcaggagatgaat
aaaactgcagaagatgaaaagtcgctcaaacgtgcgctgactgacatggaggacgaactg
agagacctcaactacaccgcggctaacatacgactccaccacctaccctcaggatttgca
gatcagtttgagagagtgaagaagtactatcgggagtcgctgcaggctgaggagaaatgc
aacgcctcggtgtcaggtcctcttagtcccgtagaacagtccaacgaaacacgaaaaatc
acagaggagctgctggaggccaggaaagatgagttcctgaagaacgtgacagctaacaac
cagtccctgaatgatctccagcaggaggttcacaacctcgacaaggacatccaggacctc
agccagaaggtgtgcggtggacacagcaacgccagtgtcaatggcagctgccctgacagc
cagtgtggtggagcgggttgccgtgatgatcagggcgacctggtatgtggaggtgaaggc
tgcaacgggacagtgagcatctccatggcagcactgaaccagtcccaaaacaccatggac
agcctgatggctgcaagcgatgagctgctgaacatctccaagaagctccaggaaattgca
aacttgactcaagatgtgaagaaccagacgatgaagactctggagaaagcccaggagaag
aagaaacatattgaagataacaacaagaatctcaaagacttcatcaagatgatcaaagac
ttcctgactgaggacgccgccgatccagagagtatagagaaggtggctctgcaggtgtta
tcgatcacgctgccgttcaaccaaaccactctggacaaaatcaccacggagataagggac
agtctttccaacctcaccaacgtcgaggccattttgaatgagaccgccgaccacgtcaac
aaagccaaggagctgctcagcaaagccaaggatgcaaaagctctagcagagagagtgaag
gatgaagccaacagcaccaaacaggcattgagtgcgtcagacaaagccattgaaaaggca
accgcagccctgaaagaggcccagagcaacctgaacaacacgcagaatgctacagcagag
gtggatttgcagctcctgcagctggaggggaaacagatggacatcatgatgcgtttgcag
aacctatcagcagaggcagaagccctgcggaacaagacggagatgaacaggaagatggca
gaagacgctctggctttggcgaacaacgccacgctcagagcgtcctccctggagcagagc
ttcaacaacacagaggaacggtacaaagagttgctgcagaaagtggagtccatcggggac
tctggaagtctggacagcatccagcagaaggttcgaacgatgaagagcgacgccgaaaat
ctcctcaacaaggcaaaggatgggataaagcaactggataatctgtcgaacacattcaag
gagaacgaggaccggatgcagaaacagctggaggagctggaagatctgaagcaaaacgcc
acagacgtgcgagacgagctcagaaaaaaaatgcaggcgttcagtgcctgccaggtatga
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integrated database retrieval system